| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF051L24 | Sequence | 677 | 009582 (6) | gb|AFL46176.1| | 3e-63 | jasmonate ZIM domain protein k.2 [Nicotiana attenuata] | 738 | 009582 (6) | ref|XP_009612806.1| | 3e-42 | PREDICTED: protein TIFY 4B-like isoform X2 [Nicotiana tomentosiformis] |
| JMSF052E02 | Sequence | 697 | 009582 (6) | ref|XP_006349717.1| | 8e-71 | PREDICTED: protein TIFY 4B-like isoform X2 [Solanum tuberosum] | 934 | 009582 (6) | ref|XP_009612806.1| | 8e-54 | PREDICTED: protein TIFY 4B-like isoform X2 [Nicotiana tomentosiformis] |
| JMSF053M09 | Sequence | 712 | 009582 (6) | gb|AFL46176.1| | 2e-66 | jasmonate ZIM domain protein k.2 [Nicotiana attenuata] | 921 | 009582 (6) | ref|XP_009591742.1| | 7e-52 | PREDICTED: protein TIFY 4B-like isoform X2 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF053M09- GGTACCAGAGACCGACTGGCAACTG
rJMSF051L24- GACCGACTGGCAACTG
rJMSF052E02- GACCGACTGGCAACTG
____________________________________________________________
consensus GGTACCAGAGACCGACTGGCAACTG
. : . : . : . : . : . :
rJMSF053M09- CCATTGAAAGAGGGAAGTGCTAGTTCTGACCCCCAAAAAGAATGGCATTTTACAGGGAAG
rJMSF051L24- CCATTGAAAGAGGGAAGTGCTAGTTCTGACCCCCAAAAAGAATGGCATTTTACAGGGAAG
rJMSF052E02- CCATTGAAAGAGGGAAGTGCTAGTTCTGACCCCCAAAAAGAATGGCATTTTACAGGGAAG
____________________________________________________________
consensus CCATTGAAAGAGGGAAGTGCTAGTTCTGACCCCCAAAAAGAATGGCATTTTACAGGGAAG
. : . : . : . : . : . :
rJMSF053M09- GAGCTTATGGCCGGTAAACAGCTCGCTTTGAACTTTTCTTGTAGTTGAAGAATAGTTACA
rJMSF051L24- GAGCTTATGGCCGGTAAACAGCTCGCTTGGAACTTTTCTTGTAGTTGAAGAATAGTTACA
rJMSF052E02- GAGCTTATGGCCGGTAAACAGCTCGCTTGGAACTTTTCTTGTAGTTGAAGAATAGTTACA
____________________________________________________________
consensus GAGCTTATGGCCGGTAAACAGCTCGCTTGGAACTTTTCTTGTAGTTGAAGAATAGTTACA
. : . : . : . : . : . :
rJMSF053M09- TTCTTAGCACAGATATCAAATTCAAGACGAGTATGTACTTGAAAATTTCTTACATCAATG
rJMSF051L24- TTCTTAGCACAGATATCAAATTCAAGACGAGTATGTACTTGAAAATTTCTTACATCAATG
rJMSF052E02- TTCTTAGCACAGATATCAAATTCAAGACGAGTATGTACTTGAAAATTTCTTACATCAATG
____________________________________________________________
consensus TTCTTAGCACAGATATCAAATTCAAGACGAGTATGTACTTGAAAATTTCTTACATCAATG
. : . : . : . : . : . :
rJMSF053M09- TAGCTCCTCAATTTTAGTCAACCACCTACATGCTACAACCTGAAATTGCACCCGCAGTTT
rJMSF051L24- TAGCTCCTCAATTTTAGTCAACCACCTACATGCTACAACCTGAAATTGCACCCGCAGTTT
rJMSF052E02- TAGCTCCTCAATTTTAGTCAACCACCTACATGCTACAACCTGAAATTGCACCCGCAGTTT
____________________________________________________________
consensus TAGCTCCTCAATTTTAGTCAACCACCTACATGCTACAACCTGAAATTGCACCCGCAGTTT
. : . : . : . : . : . :
rJMSF053M09- TCATAACACGAAGACACTATACATAAAGTGTAATAGGTCCCTTTCAACATTCAGTCTTTA
rJMSF051L24- TCATAACACGAAGACACTATACATAAAGTGTAATAGGTCCCTTTCAACATTCAGTCTTTA
rJMSF052E02- TCATAACACGAAGACACTATACATAAAGTGTAATAGGTCCCTTTCAACATTCAGTCTTTA
____________________________________________________________
consensus TCATAACACGAAGACACTATACATAAAGTGTAATAGGTCCCTTTCAACATTCAGTCTTTA
. : . : . : . : . : . :
rJMSF053M09- ACATTTGAGTGCTCATTGGAGTTATGACTTCCCATTTGATGGTTCAAGTAGATGTCTAAG
rJMSF051L24- ACATTTGAGTGCTCATTGGAGTTATGACTTCCCATTTGATGGTTCAAGTAGATGTCTAAG
rJMSF052E02- ACATTTGAGTGCTCATTGGAGTTATGACTTCCCATTTGATGGTTCAAGTAGATGTCTAAG
____________________________________________________________
consensus ACATTTGAGTGCTCATTGGAGTTATGACTTCCCATTTGATGGTTCAAGTAGATGTCTAAG
. : . : . : . : . : . :
rJMSF053M09- CTAGACGTTGAAGCGGTTTCTATCTTACTCTTGCTCTTGAACCTGTCTTTTCGCTTCTCA
rJMSF051L24- CTAGACGTTGAAGCGGTTTCTATCTTACTCTTGCTCTTGAACCTGTCTTTTCGCTTCTCA
rJMSF052E02- CTAGACGTTGAAGCGGTTTCTATCTTACTCTTGCTCTTGAACCTGTCTTTTCGCTTCTCA
____________________________________________________________
consensus CTAGACGTTGAAGCGGTTTCTATCTTACTCTTGCTCTTGAACCTGTCTTTTCGCTTCTCA
. : . : . : . : . : . :
rJMSF053M09- AGATATCTCTGAACTGATGCTTTTCTGCTTGTTGGGCCTTCCACTGTTTGCACTGCTGGT
rJMSF051L24- AGATATCTCTGAACTGATGCTTTTCTGCTTGTTGGGCCTTCCACTGTTTGCACTGCTGGT
rJMSF052E02- AGATATCTCTGAACTGATGCTTTTCTGCTTGTTGGGCCTTCCACTGTTTGCACTGCTGGT
____________________________________________________________
consensus AGATATCTCTGAACTGATGCTTTTCTGCTTGTTGGGCCTTCCACTGTTTGCACTGCTGGT
. : . : . : . : . : . :
rJMSF053M09- GAGAGCGGCACTGCATACTCTTGGCATACTTTAACATTTGCAGCTTGTAAATGGCACACT
rJMSF051L24- GAGAGCGGCACTGCATACTCTTGGCATACTTTAACATTTGCAGCTTGTAAATGGCACACT
rJMSF052E02- GAGAGCGGCACTGCATACTCTTGGCATACTTTAACATTTGCAGCTTGTAAATGGCACACT
JMSF052E02+ GTAAATGGCACACT
____________________________________________________________
consensus GAGAGCGGCACTGCATACTCTTGGCATACTTTAACATTTGCAGCTTGTAAATGGCACACT
. : . : . : . : . : . :
rJMSF053M09- GAATGTTGTGCAGTTACAGCACCATCATATGGAGAGTCAGGAGGAACAGGGAGTGTGCTT
rJMSF051L24- GAATGTTGTGCAGTTACAGCACCATCATATGGAGAGTCAGGAGGAACAGGGAGTGTGCTT
rJMSF052E02- GAATGTTGTGCAGTTACAGCACCATCATATGGAGAGTCAGGAGGAACAGGGAGTGTGCTT
JMSF052E02+ GAATGTTGTGCAGTTACAGCACCATCATATGGAGAGTCAGGAGGAACAGGGAGTGTGCTT
JMSF053M09+ TGCAGTTACAGCACCATCATATGGAGAGTCAGGAGGAACAGGGAGTGTGCTT
JMSF051L24+ GAACAGGGAGTGTGCTT
____________________________________________________________
consensus GAATGTTGTGCAGTTACAGCACCATCATATGGAGAGTCAGGAGGAACAGGGAGTGTGCTT
. : . : . : . : . : . :
rJMSF053M09- CCAATAAAATGCATGAGTGCTTGTGCCTTATCAGCTGGCACATCATCATAGACATTCACC
rJMSF051L24- CCAATAAAATGCATGAGTGCTTGTGCCTTATCAGCTGGCACATCATCATAGACATTCACC
rJMSF052E02- CCAATAAAATGCATGAGTGCTTGTGCCTTATCAGCTGGCACATCATCATAGACATTCACC
JMSF052E02+ CCAATAAAATGCATGAGTGCTTGTGCCTTATCAGCTGGCACATCATCATAGACATTCACC
JMSF053M09+ CCAATAAAATGCATGAGTGCTTGTGCCTTATCAGCTGGCACATCATCATAGACATTCACC
JMSF051L24+ CCAATAAAATGCATGAGTGCTTGTGCCTTATCAGCTGGCACATCATCATAGACATTCACC
____________________________________________________________
consensus CCAATAAAATGCATGAGTGCTTGTGCCTTATCAGCTGGCACATCATCATAGACATTCACC
. : . : . : . : . : . :
rJMSF053M09- TTGCCACAATAGAAGATTGCCATTTGCCTAGCTGGAATACATGTTGACTCTGTGCTTCTA
rJMSF051L24- TTGCCACAATAGAAGATTGCCATTTGCCTAGCTGGAATACATG
rJMSF052E02- TTGCCACAATAGAAGATTGCCATTTGCCTAGCTGGAATACATGTTGACTCTGTGCTTCTA
JMSF052E02+ TTGCCACAATAGAAGATTGCCATTTGCCTAGCTGGAATACATGTTGACTCTGTGCTTCTA
JMSF053M09+ TTGCCACAATAGAAGATTGCCATTTGCCTAGCTGGAATACATGTTGACTCTGTGCTTCTA
JMSF051L24+ TTGCCACAATAGAAGATTGCCATTTGCCTAGCTGGAATACATGTTGACTCTGTGCTTCTA
____________________________________________________________
consensus TTGCCACAATAGAAGATTGCCATTTGCCTAGCTGGAATACATGTTGACTCTGTGCTTCTA
. : . : . : . : . : . :
rJMSF053M09- GATGGAGCAGAGTCCTTGACAGCAGCCGCTGGGTGAGCTGGTAGGTCACCAAATAGATCA
rJMSF052E02- GATGGAGCAGAGTCCTTGACAGCAGCCGCTGGGTGAGCTGGTAGGTCACCAAATAGATCA
JMSF052E02+ GATGGAGCAGAGTCCTTGACAGCAGCCGCTGGGTGAGCTGGTAGGTCACCAAATAGATCA
JMSF053M09+ GATGGAGCAGAGTCCTTGACAGCAGCCGCTGGGTGAGCTGGTAGGTCACCAAATAGATCA
JMSF051L24+ GATGGAGCAGAGTCCTTGACAGCAGCCGCTGGGTGAGCTGGTAGGTCACCAAATAGATCA
____________________________________________________________
consensus GATGGAGCAGAGTCCTTGACAGCAGCCGCTGGGTGAGCTGGTAGGTCACCAAATAGATCA
. : . : . : . : . : . :
rJMSF053M09- GTCTTTTCCAGATTTTTTCCCCTAAATGGCATCACTTCCGCTGATTCCGAAATTTCTGCA
rJMSF052E02- GTCTTTTCCAGATTTTTTCCCCTAAATGGCATCACTTCCGCTGATTCCGAAATTTCTGCA
JMSF052E02+ GTCTTTTCCAGATTTTTTCCCCTAAATGGCATCACTTCCGCTGATTCCGAAATTTCTGCA
JMSF053M09+ GTCTTTTCCAGATTTTTTCCCCTAAATGGCATCACTTCCGCTGATTCCGAAATTTCTGCA
JMSF051L24+ GTCTTTTCCAGATTTTTTCCCCTAAATGGCATCACTTCCGCTGATTCCGAAATTTCTGCA
____________________________________________________________
consensus GTCTTTTCCAGATTTTTTCCCCTAAATGGCATCACTTCCGCTGATTCCGAAATTTCTGCA
. : . : . : . : . : . :
rJMSF053M09- TCTATATCCGTTTCTTTGGAGACACGAGATTCGTGATTATTACTGGTGCTCGGAGA
rJMSF052E02- TCTATATCCGTTTCTTTGGAGACACGAGATTCGTGATTATTACTGGTGCTCGGAGACCGA
JMSF052E02+ TCTATATCCGTTTCTTTGGAGACACGAGATTCGTGATTATTACTGGTGCTCGGAGACCGA
JMSF053M09+ TCTATATCCGTTTCTTTGGAGACACGAGATTCGTGATTATTACTGGTGCTCGGAGACCGA
JMSF051L24+ TCTATATCCGTTTCTTTGGAGACACGAGATTCGTGATTATTACTGGTGCTCGGAGACCGA
____________________________________________________________
consensus TCTATATCCGTTTCTTTGGAGACACGAGATTCGTGATTATTACTGGTGCTCGGAGACCGA
. : . : . : . : . : . :
rJMSF052E02- GGAGCGTACAGCTTC
JMSF052E02+ GGAGCGTACAGCTTCTTGTAACTGCCGGAGTCAGAATCCGGCGGCATTTCGGTAAGCGCT
JMSF053M09+ GGAGCGTACAGCTTCTTGTAACTGCCGGAGTCAGAATCCGGCGGCATTTCGGTAAGCGCT
JMSF051L24+ GGAGCGTACAGCTTCTTGTAACTGCCGGAGTCAGAATCCGGCGGCATTTCGGTAAGCGCT
____________________________________________________________
consensus GGAGCGTACAGCTTCTTGTAACTGCCGGAGTCAGAATCCGGCGGCATTTCGGTAAGCGCT
. : . : . : . : . : . :
JMSF052E02+ TTCAGCGAAATCACTTGTTGAATCGCCTGCGATTTGTTCCACGACGGTCTTCTCATACCT
JMSF053M09+ TTCAGCGAAATCACTTGTTGAATCGCCTGCGATTTGTTCCACGACGGTCTTCTCATACCT
JMSF051L24+ TTCAGCGAAATCACTTGTTGAATCGCCTGCGATTTGTTCCACGACGGTCTTCTCATACCT
____________________________________________________________
consensus TTCAGCGAAATCACTTGTTGAATCGCCTGCGATTTGTTCCACGACGGTCTTCTCATACCT
. : . : . : . : . : . :
JMSF052E02+ TTCTCTTTGAGGTACCGGCGGCAATCTTCGCGAGTGAGCTGAGAAATGTCGTCATCAGTT
JMSF053M09+ TTCTCTTTGAGGTACCGGCGGCAATCTTCGCGAGTGAGCTGAGAAATGTCGTCATCAGTT
JMSF051L24+ TTCTCTTTGAGGTACCGGCGGCAATCTTCGCGAGTGAGCTGAGAAATGTCGTCATCAGTT
____________________________________________________________
consensus TTCTCTTTGAGGTACCGGCGGCAATCTTCGCGAGTGAGCTGAGAAATGTCGTCATCAGTT
. : . : . : . : . : . :
JMSF052E02+ AGCTGGTTTAGGGGCTTGTCGAGAAGCGACTTGGAGACTGCCTCCACCGGTGAGATGACG
JMSF053M09+ AGCTGGTTTAGGGGCTTGTCGAGAAGCGACTTGGAGACTGCCTCCACCGGTGAGATGACG
JMSF051L24+ AGCTGGTTTAGGGGCTTGTCGAGAAGCGACTTGGAGACTGCCTCCACCGGTGAGATGACG
____________________________________________________________
consensus AGCTGGTTTAGGGGCTTGTCGAGAAGCGACTTGGAGACTGCCTCCACCGGTGAGATGACG
. : . : . : . : . : . :
JMSF052E02+ TCAGATTCGGGCGGCATCAGGCATCTATTTAGCGGGAACCTGCTCGGTGCTTTGGCGGGA
JMSF053M09+ TCAGATTCGGGCGGCATCAGGCATCTATTTAGCGGGAACCTGCTCGGTGCTTTGGCGGGA
JMSF051L24+ TCAGATTCGGGCGGCATCAGGCATCTATTTAGCGGGAACCTGCTCGGTGCTTTGGCGGGA
____________________________________________________________
consensus TCAGATTCGGGCGGCATCAGGCATCTATTTAGCGGGAACCTGCTCGGTGCTTTGGCGGGA
. : . : . : . : . : . :
JMSF052E02+ TGGATTTGAGAGATGAGAGAGT
JMSF053M09+ TGGATTTGAGAGATGAGAGAGTGAGCAGACCGGGTTTTGGTGAGCGAGTTGGGTAG
JMSF051L24+ TGGATTTTAGAGATGAGAGAGTGAGCAGACCGGGTTTTGGTGAGCGAGTTGGGTAGCTCC
____________________________________________________________
consensus TGGATTTGAGAGATGAGAGAGTGAGCAGACCGGGTTTTGGTGAGCGAGTTGGGTAGCTCC