Contig 009577:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF042A24+                                                                   CTCC
                      ____________________________________________________________
consensus                                                                     CTCC
 
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JMSF042A24+           AACATAGCAATNGCAAATGAAGTTTGAAGATTAGGTGGCTCATAGAATTGAAGGGAAGCA
                      ____________________________________________________________
consensus             AACATAGCAATNGCAAATGAAGTTTGAAGATTAGGTGGCTCATAGAATTGAAGGGAAGCA
 
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JMSF042A24+           ACAAGTTCCTCTCTGGAAGTGGTTGTGAAATCATCATCATCATATGTGCACGCATGAAAA
                      ____________________________________________________________
consensus             ACAAGTTCCTCTCTGGAAGTGGTTGTGAAATCATCATCATCATATGTGCACGCATGAAAA
 
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JMSF042A24+           ACTGAGTTCTGCAAACTTATGTCTTTCCTGTCTTTTCTCTTTGGTAAGTTTATGGAACAC
                      ____________________________________________________________
consensus             ACTGAGTTCTGCAAACTTATGTCTTTCCTGTCTTTTCTCTTTGGTAAGTTTATGGAACAC
 
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JMSF042A24+           AACTTACAAAGTATCTTCAAAAGAATCCCGCCTTTTTCCAAAACAACATTATGATCATAT
JMSF051C05+                                               TCCAAAACAACGTTATGATCATAT
                      ____________________________________________________________
consensus             AACTTACAAAGTATCTTCAAAAGAATCCCGCCTTTTTCCAAAACAACGTTATGATCATAT
 
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JMSF042A24+           ATATGCAATTCCAGGATAGCCATACTACACCTTAACAGCAAAACTAGTACTTCAACTGTA
JMSF051C05+           ATATGCAATTCCAGAATAGCCATACTACTCCTTAACAGCAAGACTAGTACTTCAACTGTA
                      ____________________________________________________________
consensus             ATATGCAATTCCAGGATAGCCATACTACTCCTTAACAGCAAGACTAGTACTTCAACTGTA
 
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JMSF042A24+           CAATTCACATGTATGCTACCTTGTCCAAGATCCTTGCTTGTACAAACATCATATAGAGAA
JMSF051C05+           CAATTCACATGTATGCTACCTTGTCCAAGATCCTTGCTTGTACAAACATCATATAGAGAA
                      ____________________________________________________________
consensus             CAATTCACATGTATGCTACCTTGTCCAAGATCCTTGCTTGTACAAACATCATATAGAGAA
 
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JMSF042A24+           GAGAATAAATTGTTAAACCTCAACGGTAGTTCTTTGAATAAAATGTCAGAAATCCCTCGT
JMSF051C05+           GAGAATATACTGTTAAACCTCAACGATAGTTCTTTGAATAAAATGTCAGAAATCACTCGT
                      ____________________________________________________________
consensus             GAGAATATATTGTTAAACCTCAACGGTAGTTCTTTGAATAAAATGTCAGAAATCCCTCGT
 
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JMSF042A24+           AGATCATTCACATCAACTTTGCTCAGGGAATCCATGGACATATGGACAAGTAAACAATAC
JMSF051C05+           AGATCATTCACATCAACTTTGCTGAGGGAATCTGTGGACATATGGACAAGTAAACAATAC
                      ____________________________________________________________
consensus             AGATCATTCACATCAACTTTGCTGAGGGAATCTGTGGACATATGGACAAGTAAACAATAC
 
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JMSF042A24+           AAACTCTTCAAGATGGGTGATTTTATGCCCTCAGGAGTTTTGATTGCGGAGAGCAGCTTC
JMFF030E20+           AAACTCTTCAAGATGGGTGATTTTATGCCCTCAAGAGTTTTGATTGCGGAGAGCAGCCTC
JMSF051C05+           AAACTCTTCAAGATGGGTGATTTTATGCCCTCAAGAGTTTTGATTGCGGAGAGCAGCCTC
                      ____________________________________________________________
consensus             AAACTCTTCAAGATGGGTGATTTTATGCCCTCAAGAGTTTTGATTGCGGAGAGCAGCCTC
 
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JMSF042A24+           TGGAGTGCTCGAGAATAATTCGAATCGGGGGCAGAATCCAGGGTTTGTCTCCGAGAATCT
JMFF030E20+           TGGAGTGATCGAGAATAATTTGAATCCGAAGCAGAATTCAGGGTTTGTCTCCGAGAATCT
JMSF051C05+           TGGAGTGATCGAGAATAATTTGAATCCGAAGCAGAATTCAGGGTTTGTCTCCGAGAATCT
                      ____________________________________________________________
consensus             TGGAGTGATCGAGAATAATTTGAATCCGAAGCAGAATTCAGGGTTTGTCTCCGAGAATCT
 
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JMSF042A24+           TTGCGGATCTTCCGCTTTCTTGTTGAAGCCATTACTCGATTTTGCAATGATACTAGCTTC
JMFF030E20+           TTGCGGATCTTCCGTTTTCTTGTTGAAGCCATTACTCAATTTTGCGATGATACTAGCTTC
JMSF051C05+           TTGCGGATCTTCCGTTTTCTTGTTGAAGCCATTACTCAATTTTGCGATGATACTAGCTTC
                      ____________________________________________________________
consensus             TTGCGGATCTTCCGTTTTCTTGTTGAAGCCATTACTCAATTTTGCGATGATACTAGCTTC
 
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JMSF042A24+           TACACAGCAAGTCT                                              
JMFF030E20+           TACACAGCAAGTCTTTGTTCCTCAAGAATGGGAGAGTACTACGACAGAGTGGCTGCGACG
JMSF051C05+           TACACAGCAAGT--------CTCAAGAATGGGAGAGTACTACGACAGAGTGGCTGCGACG
                      ____________________________________________________________
consensus             TACACAGCAAGTCTTTGTTCCTCAAGAATGGGAGAGTACTACGACAGAGTGGCTGCGACG
 
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JMFF030E20+           GATTTTTGGCTGCGACAGACTAGCTTCGAGCCTGCGACGGACGAGCTGTGAGCCTGCGAT
JMSF051C05+           GATTTTTGGCTGCGACAGACTAGCTTCGAGCCTGCGACGGACGAGCTGTGAGCCTGCGAT
                      ____________________________________________________________
consensus             GATTTTTGGCTGCGACAGACTAGCTTCGAGCCTGCGACGGACGAGCTGTGAGCCTGCGAT
 
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JMFF030E20+           GGACATGCTGGGCTGCTGGCGGTGCTGCGACGAAGTGAAGGACTGAACTACTGAAGGTTG
JMSF051C05+           GGACATGCTGGGCTGCTGGCGGTGCTGCGACGAAGTGAAGGACTGAACTACTGAAGGTTG
                      ____________________________________________________________
consensus             GGACATGCTGGGCTGCTGGCGGTGCTGCGACGAAGTGAAGGACTGAACTACTGAAGGTTG
 
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JMFF030E20+           AAGAAGGGAAGAGAAAGAGAGAAGCTGTGAGTGTGTGATGGCAGAAAGTGAGAAGTGAC 
JMSF051C05+           AAGAAGGGAAGAGAAAGAGAGAAGCTGTGAGTGTGTGATGGCAGAAAGTGAGAAGTGACC
                      ____________________________________________________________
consensus             AAGAAGGGAAGAGAAAGAGAGAAGCTGTGAGTGTGTGATGGCAGAAAGTGAGAAGTGACC