Contig 009576:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS044G03Sequence614009576 (7)ref|XP_009613164.1|121PREDICTED: programmed cell death protein 4-like [Nicotiana tomentosiformis]
JMFS055F11Sequence618009576 (7)ref|XP_009613164.1|121PREDICTED: programmed cell death protein 4-like [Nicotiana tomentosiformis]
JMFS090F12Sequence615009576 (7)ref|XP_009613164.1|121PREDICTED: programmed cell death protein 4-like [Nicotiana tomentosiformis]
JMFS115A07Sequence627009576 (7)ref|XP_009613164.1|124PREDICTED: programmed cell death protein 4-like [Nicotiana tomentosiformis]
JMFS129C09Sequence609009576 (7)ref|XP_009613164.1|127PREDICTED: programmed cell death protein 4-like [Nicotiana tomentosiformis]
JMFS155A03Sequence621009576 (7)ref|XP_009613164.1|121PREDICTED: programmed cell death protein 4-like [Nicotiana tomentosiformis]
JMSF051B19Sequence600009576 (7)ref|XP_009613164.1|131PREDICTED: programmed cell death protein 4-like [Nicotiana tomentosiformis]741020545ref|XP_009359514.1|312PREDICTED: uncharacterized protein LOC103950082 [Pyrus x bretschneideri]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS155A03+ GTGAGAC
                      ____________________________________________________________
consensus GTGAGAC
 
. : . : . : . : . : . :
JMFS155A03+ CCCCCATCAGTGTCAAGTAGCTTTCCNCAGGTGCCTTTACCACCAGCTCCATCCTTCTTA
JMFS115A07+ GCTTTCCCCAGGTGCCTTTACCACCAGCTCCATCCTTCTTA
JMFS055F11+ GCCTTTACCACCAGCTCCATCCTTCTTA
JMFS129C09+ GCCTTTACCACCAGCTCCATCCTTCTTA
JMFS044G03+ GCCTTTACCACCAGCTCCATCCTTCTTA
JMFS090F12+ GCCTTTACCACCAGCTCCATCCTTCTTA
                      ____________________________________________________________
consensus CCCCCATCAGTGTCAAGTAGCTTTCCCCAGGTGCCTTTACCACCAGCTCCATCCTTCTTA
 
. : . : . : . : . : . :
JMFS155A03+ ATTTTTATATGCTTGCCAGAGTGTGTGCGCCTCACATGTCTCATCGCAATCCCAGCAGTG
JMFS115A07+ ATTTTTATATGCTTGCCAGAGTGTGTGCGCCTCACATGTCTCATCGCAATCCCAGCAGTG
JMFS055F11+ ATTTTTATATGCTTGCCAGAGTGTGTGCGCCTCACATGTCTCATCGCAATCCCAGCAGTG
JMFS129C09+ ATTTTTATATGCTGNCCAGAGTGTGTGCGCCTCACATGTCTCATCGCAATCCCAGCAGTG
JMFS044G03+ ATTTTTATATGCTTGCCAGAGTGTGTGCGCCTCACATGTCTCATCGCAATCCCAGCAGTG
JMFS090F12+ ATTTTTATATGCTTGCCAGAGTGTGTGCGCCTCACATGTCTCATCGCAATCCCAGCAGTG
JMSF051B19+ ATTTTTATATGCTTGCCAGAGTGTGTGCGCCTCACATGTCTCATCGCAATCCCAGCAGTG
                      ____________________________________________________________
consensus ATTTTTATATGCTTGCCAGAGTGTGTGCGCCTCACATGTCTCATCGCAATCCCAGCAGTG
 
. : . : . : . : . : . :
JMFS155A03+ GACGCCTTGCCGCCAAGAGGAGCTTTCACGTGGTGTTCCGACAGCAGCGCAGATGGAGAC
JMFS115A07+ GACGCCTTGCCGCCAAGAGGAGCTTTCACGTGGTGTTCCGACAGCAGCGCAGATGGAGAC
JMFS055F11+ GACGCCTTGCCGCCAAGAGGAGCTTTCACGTGGTGTTCCGACAGCAGCGCAGATGGAGAC
JMFS129C09+ GACGCCTTGCCGCCAAGAGGAGCTTTCACGTGGTGTTCCGACAGCAGCGCAGATGGAGAC
JMFS044G03+ GACGCCTTGCCGCCAAGAGGAGCTTTCACGTGGTGTTCCGACAGCAGCGCAGATGGAGAC
JMFS090F12+ GACGCCTTGCCGCCAAGAGGAGCTTTCACGTGGTGTTCCGACAGCAGCGCAGATGGAGAC
JMSF051B19+ GACGCCTTGCCGCCAAGAGGAGCTTTCACGTGGTGTTCCGACAGCAGCGCAGATGGAGAC
                      ____________________________________________________________
consensus GACGCCTTGCCGCCAAGAGGAGCTTTCACGTGGTGTTCCGACAGCAGCGCAGATGGAGAC
 
. : . : . : . : . : . :
JMFS155A03+ TTGGGGCGCGGAGACCTAAGTGTAGGAGACTTGGGCGAAGAGGAAAGAACCTCCACATTC
JMFS115A07+ TTGGGGCGCGGAGACCTAAGTGTAGGAGACTTGGGCGAAGAGGAAAGAACCTCCACATTC
JMFS055F11+ TTGGGGCGCGGAGACCTAAGTGTAGGAGACTTGGGCGAAGAGGAAAGAACCTCCACATTC
JMFS129C09+ TTGGGGCGCGGAGACCTAAGTGTAGGAGACTTGGGCGAAGAGGAAAGAACCTCCACATTC
JMFS044G03+ TTGGGGCGCGGAGACCTAAGTGTAGGAGACTTGGGCGAAGAGGAAAGAACCTCCACATTC
JMFS090F12+ TTGGGGCGCGGAGACCTAAGTGTAGGAGACTTGGGCGAAGAGGAAAGAACCTCCACATTC
JMSF051B19+ TTGGGGCGCGGAGACCTAAGTGTAGGAGACTTGGGCGAAGAGGAAAGAACCTCCACATTC
                      ____________________________________________________________
consensus TTGGGGCGCGGAGACCTAAGTGTAGGAGACTTGGGCGAAGAGGAAAGAACCTCCACATTC
 
. : . : . : . : . : . :
JMFS155A03+ TGAGTCGCGATTTTCAAAATCTCCCTCTGTTCATCCGTCAGAAATCCCTCACCTGACGCC
JMFS115A07+ TGAGTCGCGATTTTCAAAATCTCCCTCTGTTCATCCGTCAGAAATCCCTCACCTGACGCC
JMFS055F11+ TGAGTCGCGATTTTCAAAATCTCCCTCTGTTCATCCGTCAGAAATCCCTCACCTGACGCC
JMFS129C09+ TGAGTCGCGATTTTCAAAATCTCCCTCTGTTCATCCGTCAGAAATCCCTCACCTGACGCC
JMFS044G03+ TGAGTCGCGATTTTCAAAATCTCCCTCTGTTCATCCGTCAGAAATCCCTCACCTGACGCC
JMFS090F12+ TGAGTCGCGATTTTCAAAATCTCCCTCTGTTCATCCGTCAGAAATCCCTCACCTGACGCC
JMSF051B19+ TGAGTCGCGATTTTCAAAATCTCCCTCTGTTCATCCGTCAGAAATCCCTCACCTGACGCC
                      ____________________________________________________________
consensus TGAGTCGCGATTTTCAAAATCTCCCTCTGTTCATCCGTCAGAAATCCCTCACCTGACGCC
 
. : . : . : . : . : . :
JMFS155A03+ ATTTCCACTCACTCACTCACTGACAAACCCTCTCTGCGCCGAGTATAGGGCACGAAACAG
JMFS115A07+ ATTTCCACTCACTCACTCACTGACAAACCCTCTCTGCGCCGAGTATAGGGCACGAAACAG
JMFS055F11+ ATTTCCACTCACTCACTCACTGACAAACCCTCTCTGCGCCGAGTATAGGGCACGAAACAG
JMFS129C09+ ATTTCCACTCACTCACTCACTGACAAACCCTCTCTGCGCCGAGTATAGGGCACGAAACAG
JMFS044G03+ ATTTCCACTCACTCACTCACTGACAAACCCTCTCTGCGCCGAGTATAGGGCACGAAACAG
JMFS090F12+ ATTTCCACTCACTCACTCACTGACAAACCCTCTCTGCGCCGAGTATAGGGCACGAAACAG
JMSF051B19+ ATTTCCACTCACTCACTCACTGACAAACCCTCTCTGCGCCGAGTATAGGGCACGAAACAG
                      ____________________________________________________________
consensus ATTTCCACTCACTCACTCACTGACAAACCCTCTCTGCGCCGAGTATAGGGCACGAAACAG
 
. : . : . : . : . : . :
JMFS155A03+ TGAAGAGCGTTACCGATTTGGAACGCTATACGGCCACCGGAGAAGCTTCAAATAGCGACA
JMFS115A07+ TGAAGAGCGTTACCGATTTGGAACGCTATACGGCCACCGGAGAAGCTTCAAATAGCGACA
JMFS055F11+ TGAAGAGCGTTACCGATTTGGAACGCTATACGGCCACCGGAGAAGCTTCAAATAGCGACA
JMFS129C09+ TGAAGAGCGTTACCGATTTGGAACGCTATACGGCCACCGGAGAAGCTTCAAATAGCGACA
JMFS044G03+ TGAAGAGCGTTACCGATTTGGAACGCTATACGGCCACCGGAGAAGCTTCAAATAGCGACA
JMFS090F12+ TGAAGAGCGTTACCGATTTGGAACGCTATACGGCCACCGGAGAAGCTTCAAATAGCGACA
JMSF051B19+ TGAAGAGCGTTACCGATTTGGAACGCTATACGGCCACCGGAGAAGCTTCAAATAGCGACA
                      ____________________________________________________________
consensus TGAAGAGCGTTACCGATTTGGAACGCTATACGGCCACCGGAGAAGCTTCAAATAGCGACA
 
. : . : . : . : . : . :
JMFS155A03+ AAATCCTCCGTTCTTGGCTCGGATCTCGAGCCAAGAGGGAACAGAAACAGAATCGAAGAA
JMFS115A07+ AAATCCTCCGTTCTTGGCTCGGATCTCGAGCCAAGAGGGAACAGAAACAGAATCGAAGAA
JMFS055F11+ AAATCCTCCGTTCTTGGCTCGGATCTCGAGCCAAGAGGGAACAGAAACAGAATCGAAGAA
JMFS129C09+ AAATCCTCCGTTCTTGGCTCGGATCTCGAGCCAAGAGGGAACAGAAACAGAATCGAAGAA
JMFS044G03+ AAATCCTCCGTTCTTGGCTCGGATCTCGAGCCAAGAGGGAACAGAAACAGAATCGAAGAA
JMFS090F12+ AAATCCTCCGTTCTTGGCTCGGATCTCGAGCCAAGAGGGAACAGAAACAGAATCGAAGAA
JMSF051B19+ AAATCCTCCGTTCTTGGCTCGGATCTCGAGCCAAGAGGGAACAGAAACAGAATCGAAGAA
                      ____________________________________________________________
consensus AAATCCTCCGTTCTTGGCTCGGATCTCGAGCCAAGAGGGAACAGAAACAGAATCGAAGAA
 
. : . : . : . : . : . :
JMFS155A03+ CCCGATCTTTCCTTCAGATTTACACACAGCCGTGCGTTGTTTCAACCCTAGATCAACGAA
JMFS115A07+ CCCGATCTTTCCTTCAGATTTACACACAGCCGTGCGTTGTTTCAACCCTAGATCAACGAA
JMFS055F11+ CCCGATCTTTCCTTCAGATTTACACACAGCCGTGCGTTGTTTCAACCCTAGATCAACGAA
JMFS129C09+ CCCGATCTTTCCTTCAGATTTACACACAGCCGTGCGTTGTTTCAACCCTAGATCAACGAA
JMFS044G03+ CCCGATCTTTCCTTCAGATTTACACACAGCCGTGCGTTGTTTCAACCCTAGATCAACGAA
JMFS090F12+ CCCGATCTTTCCTTCAGATTTACACACAGCCGTGCGTTGTTTCAACCCTAGATCAACGAA
JMSF051B19+ CCCGATCTTTCCTTCAGATTTACACACAGCCGTGCGTTGTTTCAACCCTAGATCAACGAA
                      ____________________________________________________________
consensus CCCGATCTTTCCTTCAGATTTACACACAGCCGTGCGTTGTTTCAACCCTAGATCAACGAA
 
. : . : . : . : . : . :
JMFS155A03+ G-AAATGCTCAGGAAGAACCGATTTGTATAATATAAAGAGATATATGTGTATGTAAATGT
JMFS115A07+ G-AAATGCTCAGGAAGAACCGATTTGTATAATATAAAGAGATATATGTGTATGTAAATGT
JMFS055F11+ G-AAATGCTCAGGAAGAACCGATTTGTATAATATAAAGAGATATATGTGTATGTAAATGT
JMFS129C09+ G-AAATGCTCAGGAAGAACCGATTTGTATAATATAAAGAGATATATGTGTATGTAAATGT
JMFS044G03+ G-AAATGCTCAGGAAGAACCGATTTGTATAATATAAAGAGATATATGTGTATGTAAATGT
JMFS090F12+ G-AAATGCTCAGGAAGAACCGATTTGTATAATATAAAGAGATATATGTGTATGTAAATGT
JMSF051B19+ GAAAATGCTCAGGAAGAACCGATTTGTATAATATAAAGAGATATATGTGTATGTAAATGT
                      ____________________________________________________________
consensus G-AAATGCTCAGGAAGAACCGATTTGTATAATATAAAGAGATATATGTGTATGTAAATGT
 
. : . : . : . : . : . :
JMFS155A03+ GTAAGTATAGGAGAA
JMFS115A07+ GTAAGTATAGGAGAAGATGTCTGGTTCGGGCTTTAGATTTGATTGAA
JMFS055F11+ GTAAGTATAGGAGAAGATGTCTGGTTCGGGCTTTAGATTTGATTGAA
JMFS129C09+ GTAAGTATAGGAGAAGATGTCTGGTTCGGGCTTTAGATTTGA
JMFS044G03+ GTAAGTATAGGAGAAGATGTCTGGTTCGGGCTTTAGATTTGATTGAA
JMFS090F12+ GTAAGTATAGGAGAAGATGTCTGGTTCGGGCTTTAGATTTGATTGAA
JMSF051B19+ GTAAGTATAGGAGAAGATGTCTGGTTCGGGCTTTAGATTTGATTGAAGGAGGAAACTGTC
                      ____________________________________________________________
consensus GTAAGTATAGGAGAAGATGTCTGGTTCGGGCTTTAGATTTGATTGAAGGAGGAAACTGTC