| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF002G02 | Sequence | 425 | 009569 (10) | ref|XP_011088417.1| | 8e-39 | PREDICTED: protein RER1A [Sesamum indicum] | 781 | 009569 (10) | ref|XP_011088417.1| | 9e-88 | PREDICTED: protein RER1A [Sesamum indicum] |
| JMSF004H15 | Sequence | 382 | 009569 (10) | ref|XP_004230967.1| | 2e-27 | PREDICTED: protein RER1B [Solanum lycopersicum] | 139 | 019218 | |||
| JMSF015M09 | Sequence | 477 | 009569 (10) | ref|XP_011088417.1| | 3e-66 | PREDICTED: protein RER1A [Sesamum indicum] | 774 | 009569 (10) | ref|XP_011088417.1| | 2e-85 | PREDICTED: protein RER1A [Sesamum indicum] |
| JMSF034J04 | Sequence | 163 | 009569 (10) | ref|XP_011088417.1| | 3e-12 | PREDICTED: protein RER1A [Sesamum indicum] | |||||
| JMSF040E08 | Sequence | 606 | 009569 (10) | ref|XP_011088417.1| | 2e-97 | PREDICTED: protein RER1A [Sesamum indicum] | 904 | 009569 (10) | ref|XP_011088417.1| | 5e-100 | PREDICTED: protein RER1A [Sesamum indicum] |
| JMSF049H15 | Sequence | 690 | 009569 (10) | ref|XP_011088417.1| | 4e-96 | PREDICTED: protein RER1A [Sesamum indicum] | 722 | 009569 (10) | ref|XP_011088417.1| | 2e-73 | PREDICTED: protein RER1A [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF049H15- AGATGAGTT
____________________________________________________________
consensus AGATGAGTT
. : . : . : . : . : . :
rJMSF049H15- TGTGGGGCAAAAGGCCCCTGACAAAAATAATAGTTTGAGACTTTGCATCAAGGGAACTAC
rJMSF015M09- AAAGGCCCCTGACAAAAATAATAGTTTGAGACTTTGCATCAAGGGAACTAC
rJMSF002G02- AAAGGCCCCTGGACAAAATAATAGTTTGAGACTTTGCATCAAGGGAACTAC
rJMSF040E08- AAAGGCCCCTGACAAAAATAATAGTTTGAGACTTTGCATCAAGGGAACTAC
____________________________________________________________
consensus TGTGGGGCAAAAGGCCCCTGACAAAAATAATAGTTTGAGACTTTGCATCAAGGGAACTAC
. : . : . : . : . : . :
rJMSF049H15- ATTTTTGTGACATCGTATTCAAATCCATATTGAACTAATAAAGTACAAATCCAAAATAAC
rJMSF015M09- ATTTTTGTGACATCGTATTCAAATCCATATTGAACTAATAAAGTACAAATCCAAAATAAC
rJMSF002G02- ATTTTTGTGACATCGTATTCAAATCCATATTGAACTAATAAAGTACAAATCCAAAATAAC
rJMSF040E08- ATTTTTGTGACATCGTATTCAAATCCATATTGAACTAATAAAGTACAAATCCAAAATAAC
____________________________________________________________
consensus ATTTTTGTGACATCGTATTCAAATCCATATTGAACTAATAAAGTACAAATCCAAAATAAC
. : . : . : . : . : . :
rJMSF049H15- TAAAGATAAGCAGCAACCCAAGCCTCTTTTCTATCCATCTGGGGTTTGCCTCTTCATTGT
rJMSF015M09- TAAAGATAAGCAGCAACCCAAGCCTCTTTTCTATCCATCTGGGGTTTGCCTCTTCATTGT
rJMSF002G02- TAAAGATAAGCAGCAACCCAAGCCTCTTTTCTATCCATCTGGGGTTTGCCTCTTCATTGT
rJMSF040E08- TAAAGATAAGCAGCAACCCAAGCCTCTTTTCTATCCATCTGGGGTTTGCCTCTTCATTGT
____________________________________________________________
consensus TAAAGATAAGCAGCAACCCAAGCCTCTTTTCTATCCATCTGGGGTTTGCCTCTTCATTGT
. : . : . : . : . : . :
rJMSF049H15- TCCTCCCATCTCTCGATTCTTCCTTGGTGGGTAGAAGGTATCACAAGTTCAGTCTGCTCT
rJMSF015M09- TCCTCCCATCTCTCGATTCTTCCTTGGTGGGTAGAAGGTATCACAAGTTCAGTCTGCTCT
rJMSF002G02- TCCTCCCATCTCTCGATTCTTCCTTGGTGGGTAGAAGGTATCACAAGTTCAGTCTGCTCT
rJMSF040E08- TCCTCCCATCTCTCGATTCTTCCTTGGTGGGTAGAAGGTATCACAAGTTCAGTCTGCTCT
JMSF049H15+ GGTAGAAGGTATCACAAGTTCAGTCTGCTCT
____________________________________________________________
consensus TCCTCCCATCTCTCGATTCTTCCTTGGTGGGTAGAAGGTATCACAAGTTCAGTCTGCTCT
. : . : . : . : . : . :
rJMSF049H15- GGAACTGCTGGCACTTGATGCCGCTTTTTTTCCACCACCGTACTTCTGCTTTCCAGTGTT
rJMSF015M09- GGAACTGCTGGCACTTGATGCCGCTTTTTTTCCACCACCGTACTTCTGCTTTCCAGTGTT
rJMSF002G02- GGAACTGCTGGCACTTGATGCCGCTTTTTTTCCACCACCGTACTTCTGCTTTCCAGTGTT
rJMSF040E08- GGAACTGCTGGCACTTGATGCCGC-TTTTTTCCACCACCGTACTTCTGCTTTCCAGTGTT
JMSF040E08+ TTCCAGTGTT
JMSF049H15+ GGAACTGCTGGCACTTGATGCCGCTTTTTTTCCACCACCGTACTTCTGCTTTCCAGTGTT
____________________________________________________________
consensus GGAACTGCTGGCACTTGATGCCGCTTTTTTTCCACCACCGTACTTCTGCTTTCCAGTGTT
. : . : . : . : . : . :
rJMSF049H15- AAATGGGATGTATTTATACTTGATCATGTGCATAATTTGGCGCTTCATCGTGAGCACAAA
rJMSF015M09- AAATGGGATGTATTTATACTTGATCATGTGCATAATTTGGCGCTTCATCGTGAGCACAAA
rJMSF002G02- AAATGGGATGTATTTATACTTGATCATGTGCATAATTTGGCGCTTCATCGTGAGCACAAA
rJMSF040E08- AAATGGGATGTATTTATACTTGATCATGTGCATAATTTGGCGCTTCATCGTGAGCACAAA
JMSF040E08+ AAATGGGATGTATTTATACTTGATCATGTGCATAATTTGGCGCTTCATCGTGAGCACAAA
JMSF049H15+ AAATGGGATGTATTTATACTTGATCATGTGCATAATTTGGCGCTTCATCGTGAGCACAAA
____________________________________________________________
consensus AAATGGGATGTATTTATACTTGATCATGTGCATAATTTGGCGCTTCATCGTGAGCACAAA
. : . : . : . : . : . :
rJMSF049H15- GAGAACAATCCAGTAGATCAACAATATTGGCCAAAAGACAGGGACGTCAAACAGGGAGAA
rJMSF015M09- GAGAACAATCCAGTAGATCAACAATATTGGCCAAAAGACAGGGACGTCAAACAGGGAGAA
rJMSF002G02- GAGAACAATCCAGTAGATCAACAATATTGGCCAAAAGACAGGGACGTCAAACAGGGAGAA
rJMSF040E08- GAGAACAATCCAGTAGATCAACAATATTGGCCAAAAGACAGGGACGTCAAACAGGGAGAA
JMSF040E08+ GAGAACAATCCAGTAGATCAACAATATTGGCCAAAAGACAGGGACGTCAAACAGGGAGAA
JMSF015M09+ A
JMSF049H15+ GAGAACAATCCAGTAGATCAACAATATTGGCCAAAAGACAGGGACGTCAAACAGGGAGAA
____________________________________________________________
consensus GAGAACAATCCAGTAGATCAACAATATTGGCCAAAAGACAGGGACGTCAAACAGGGAGAA
. : . : . : . : . : . :
rJMSF049H15- GAAGGTCATGACGAATGCCACACAAAATGCCTTAGTGATAGCATACCAAAACTTGAATTC
rJMSF015M09- GAAGGTCATGACGAATGCCACACAAAATGCCTTAGTGATAGCATACCAAAACTTGAATTC
rJMSF002G02- GAAGGTCATGACGAATGCCACACAAAATGCCTTAGTGATAGCATACCAAAACTTGAATTC
rJMSF040E08- GAAGGTCATGACGAATGCCACACAAAATGCCTTAGTGATAGCATACCAAAACTTGAATTC
JMSF040E08+ GAAGGTCATGACGAATGCCACACAAAATGCCTTAGTGATAGCATACCAAAACTTGAATTC
JMSF015M09+ GAAGGTCATGACGAATGCCACACAAAATGCCTTAGTGATAGCATACCAAAACTTGAATTC
JMSF049H15+ GAAGGTCATGACGAATGCCACACAAAATGCCTTAGTGATAGCATACCAAAACTTGAATTC
____________________________________________________________
consensus GAAGGTCATGACGAATGCCACACAAAATGCCTTAGTGATAGCATACCAAAACTTGAATTC
. : . : . : . : . : . :
rJMSF049H15- TGGAAGCCGACGAATGAACGGCTTGAATTCATCTGAGCCTTTCGTAGGCAGCGTAGGGCC
rJMSF015M09- TGGAAGCCGACGAATGAACGGCTTGAATTCATCTGAGCCTTTCGTAGGCAGCGTAGGACC
rJMSF002G02- TGGAAGCCGACGAATGAACGGCTTGAATTCATCTGAGCCTTTCGTAGGCAGCGTAGGACC
rJMSF040E08- TGGAAGCCGACGAATGAACGGCTTGAATTCATCTGAGCCTTTCGTAGGCAGCGTAGGACC
JMSF040E08+ TGGAAGCCGACGAATGAACGGCTTGAATTCATCTGAGCCTTTCGTAGGCAGCGTAGGACC
JMSF002G02+ TCGTAGGCAGCGTAGGACC
JMSF015M09+ TGGAAGCCGACGAATGAACGGCTTGAATTCATCTGAGCCTTTCGTAGGCAGCGTAGGACC
JMSF049H15+ TGGAAGCCGACGAATGAACGGCTTGAATTCATCTGAGCCTTTCGTAGGCAGCGTAGGGCC
____________________________________________________________
consensus TGGAAGCCGACGAATGAACGGCTTGAATTCATCTGAGCCTTTCGTAGGCAGCGTAGGACC
. : . : . : . : . : . :
rJMSF049H15- ATCTGAAGGTTCTAGCTCTGGGTCAGTAAGAGGTGACAGAAAACCAATCAGCAAATTCAG
JMSF034J04+ GCTCTGGGTCAGTAAGAGGTGACAGAAANCCAATCAGCAAATTCAG
rJMSF015M09- ATCTGAAGGTTCTAGCTCTGGGTCAGTAAGAGGTGACAGAAAACCAATCAGCAAATTCAG
rJMSF002G02- ATCTGAAGGTTCTAGCTCTGGGTCAGTAAGAGGTGACAGAAAACCAATCAGCAAATTCAG
rJMSF040E08- ATCTGAAGGTTCTAGCTCTGGGTCAGTAAGAGGTGACAGAAAACCAATCAGCAAATTCAG
JMSF040E08+ ATCTGAAGGTTCTAGCTCTGGGTCAGTAAGAGGTGACAGAAAACCAATCAGCAAATTCAG
JMSF002G02+ ATCTGAAGGTTCTAGCTCTGGGTCAGTAAGAGGTGACAGAAAACCAATCAGCAAATTCAG
JMSF015M09+ ATCTGAAGGTTCTAGCTCTGGGTCAGTAAGAGGTGACAGAAAACCAATCAGCAAATTCAG
JMSF004H15+ AGGTGACAGAAANCCAATCAGCAANTTCAG
JMSF049H15+ ATCTGAAGGTTCTAGCTCTGGGTCAGTAAGAGGTGACAGAAAACCAATCAGCAAATTCAG
____________________________________________________________
consensus ATCTGAAGGTTCTAGCTCTGGGTCAGTAAGAGGTGACAGAAAACCAATCAGCAAATTCAG
. : . : . : . : . : . :
rJMSF049H15- TAGGTAGATGCCAAGACCATAGCTCACAATGTAGAATCCTTGGATATAATAGACACGCAA
JMSF034J04+ TAGGTAGATGCCAAGACCATAGCTCACAATGTAGAATCCTTGGATATAATNGACACGCAA
rJMSF015M09- TAGGTAGATGCCAAGACCATAGCTCACAATGTAGAATCCTTGGATATAATAGACACGCAA
rJMSF002G02- TAGGTAGATGCCAAGACCATAGCTCACAATGTAGAATCCTTGGATATAATAGACACGCAN
rJMSF040E08- TAGGTAGATGCCAAGACCATAGCTCACAATGTAGAATCCTTGGATATAATAGACACGCAA
JMSF040E08+ TAGGTAGATGCCAAGACCATAGCTCACAATGTAGAATCCTTGGATATAATAGACACGCAA
JMSF002G02+ TAGGTAGATGCCAAGACCATAGCTCACAATGTAGAATCCTTGGATATAATAGACACGCAA
JMSF015M09+ TAGGTAGATGCCAAGACCATAGCTCACAATGTAGAATCCTTGGATATAATAGACACGCAA
JMSF004H15+ TATGTAGATTCCCAAACCGTAGGTCACAATGTAGAACCCTTGGACATAAAAGACCCGCAA
JMSF049H15+ TAGGTAGATGCCAAGACCATAGCTCACAATGTAGAATCCTTGGATATAATAGACACGCAA
____________________________________________________________
consensus TAGGTAGATGCCAAGACCATAGCTCACAATGTAGAATCCTTGGATATAATAGACACGCAA
. : . : . : . : . : . :
rJMSF049H15- AGCATAAAGACATGCTAAGGCGAAGGTCCCAATCCACCTATATAGAGCATGGG
JMSF034J04+ AGCATAAAGACATGNTAAGGCGAAGGTCCCAATCCACCTATATAGAGCATGGGGTGT
rJMSF015M09- AGCATAAAGACATGCTAAGGCGAAGGTCCCAATCCACCTATATAGAGCATGGGGTGTAGT
rJMSF002G02- AGCATAAAGACATGCTAAGGCGAAGGTCCCAATCCACCTATATAGAGCATGGGGTGTAGT
rJMSF040E08- AGCATAAAGACATGCTAAGGCGAAGGTCCCAATCCACCTATATAGAGCATGGGGTGTAGT
JMSF040E08+ AGCATAAAGACATGCTAAGGCGAAGGTCCCAATCCACCTATATAGAGCATGGGGTGTAGT
JMSF002G02+ AGCATAAAGACATGCTAAGGCGAAGGTCCCAATCCACCTATATAGAGCATGGGGTGTAGT
JMSF015M09+ AGCATAAAGACATGCTAAGGCGAAGGTCCCAATCCACCTATATAGAGCATGGGGTGTAGT
JMSF004H15+ AGCATAAAGAGATGCAAAGCCAAAAGTTCCAATCCATCTATACAGAGCATGGGGTGTAGT
JMSF049H15+ AGCATAAAGACATGCTAAGGCGAAGGTCCCAATCCACCTATATAGAGCATGGGGTGTAGT
____________________________________________________________
consensus AGCATAAAGACATGCTAAGGCGAAGGTCCCAATCCACCTATATAGAGCATGGGGTGTAGT
. : . : . : . : . : . :
rJMSF015M09- TTTATCTAAATAATACTGGAATATCCTTGAAANGTCATGCCTCCTT
rJMSF002G02- TTTATCTAAATAATACTGGAATATCCTTGAAAAGTCATGCCTCCTTTGATNCAGTGCTGC
rJMSF040E08- TTTATCTAAATAATACTGGAATATCCTTGAAAAGTCATGCCTCCTTTGATTCAGTGCTGC
JMSF040E08+ TTTATCTAAATAATACTGGAATATCCTTGAAAAGTCATGCCTCCTTTGATTCAGTGCTGC
JMSF002G02+ TTTATCTAAATAATACTGGAATATCCTTGAAAAGTCATGCCTCCTTTGATTCAGTGCTGC
JMSF015M09+ TTTATCTAAATAATACTGGAATATCCTTGAAAAGTCATGCCTCCTTTGATTCAGTGCTGC
JMSF004H15+ TTTATCTAAATAAAACTGGAAAAGCTTTGAAAATTCATGCCTCCGCTGGTTCAGTGCTGC
JMSF049H15+ TTTATCTAAATAATACTGGAATATCCTTGAAAAGTCATGCCTCCTTTGATTCAGTGCTGC
____________________________________________________________
consensus TTTATCTAAATAATACTGGAATATCCTTGAAAAGTCATGCCTCCTTTGATTCAGTGCTGC
. : . : . : . : . : . :
rJMSF002G02- A
rJMSF040E08- AGCAGTTAACGGACCATCACCTCCAACGCCCTCCATAAAACCTCAATAGTGCAACACTGC
JMSF040E08+ AGCAGTTAACGGACCATCACCTCCAACGCCCTCCATAAAACCTCAATAGTGCAACACTGC
JMSF002G02+ AGCAGTTAACGGACCATCACCTCCAAC
JMSF015M09+ AGCAGTTAACGGACCATCACCTCCAACGCCCTCCATAAAACCTCAATAGTGCAACACTGC
JMSF004H15+ AGCCGTTAATGCAGCATCACCTCCAAC
JMSF049H15+ AGCAGTTAACGGACCATCACCTCCAACGCCCTCCATAAAACCTCAATAGTGCAACACTGC
____________________________________________________________
consensus AGCAGTTAACGGACCATCACCTCCAACGCCCTCCATAAAACCTCAATAGTGCAACACTGC
. : . : . : . : . : . :
rJMSF040E08- AACCCCCTTGAAGTAAAAAGTGAGAAGAAGAGTGGATCTCTTTGGGAAGATCTTCT
JMSF040E08+ AA-CCCCTTGAAGTAAAAAGTGAGAAGAAGAGTGGATCTCTTTGGGAAGATCTTCT
JMSF015M09+ AA-CCCCTTGAAGTAAAAAGTGAGAAGAAGAGTGGATCTCTTTGGGAAGATCTTCT
JMSF049H15+ AA-CCCCTTGAAGTAAAAAGTGAGAAGAAGAGTGGATCTCTTTGGGAAGATCTTCTGATC
____________________________________________________________
consensus AA-CCCCTTGAAGTAAAAAGTGAGAAGAAGAGTGGATCTCTTTGGGAAGATCTTCTGATC