Contig 009566:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013J07Sequence254006442 (3)ref|XP_010254684.1|60.5PREDICTED: uncharacterized protein LOC104595592 [Nelumbo nucifera]688009566 (2)
JMSF049D17Sequence518009566 (2)ref|XP_011028607.1|65.9PREDICTED: uncharacterized protein LOC105128582 [Populus euphratica]763013674 (4)ref|XP_007026017.1|3e-93Beta glucosidase 46 isoform 1 [Theobroma cacao] gb|EOY28639.1| Beta glucosidase

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF013J07- TTTTAATAAATACG
                      ____________________________________________________________
consensus TTTTAATAAATACG
 
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rJMSF013J07- ACAATATTAATGAGGTACAAATATTACAGCTAGATAGATTACAGAATATATATTGATGTG
                      ____________________________________________________________
consensus ACAATATTAATGAGGTACAAATATTACAGCTAGATAGATTACAGAATATATATTGATGTG
 
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rJMSF013J07- ATGAATCTGATCTGCTGGTACAAATTAAAATAAAGAAACTAAGTAAGTAACTGTAATTGA
                      ____________________________________________________________
consensus ATGAATCTGATCTGCTGGTACAAATTAAAATAAAGAAACTAAGTAAGTAACTGTAATTGA
 
. : . : . : . : . : . :
rJMSF013J07- AATTGTATGTGGAAGTAATTAATGAGGTAGCTAGCTAGCTAACTCCGGCGGCGGCCTCGG
                      ____________________________________________________________
consensus AATTGTATGTGGAAGTAATTAATGAGGTAGCTAGCTAGCTAACTCCGGCGGCGGCCTCGG
 
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rJMSF013J07- AGATGCTCAGTAGTGAGGGTTGCCATGCGCCTTTGCATCTGCCTCCTCCTCCTCCTGCTC
                      ____________________________________________________________
consensus AGATGCTCAGTAGTGAGGGTTGCCATGCGCCTTTGCATCTGCCTCCTCCTCCTCCTGCTC
 
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rJMSF013J07- CTGCTGCAGAAGAAGAAGACCTATGCCTCCTTTCATGCTTTACATGCTGCTGCATATATA
                      ____________________________________________________________
consensus CTGCTGCAGAAGAAGAAGACCTATGCCTCCTTTCATGCTTTACATGCTGCTGCATATATA
 
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rJMSF013J07- CATTTAATCATTTAATTTCTTTTTATAGTTAGCTATGCAAGCATATATACACTACTCATT
                      ____________________________________________________________
consensus CATTTAATCATTTAATTTCTTTTTATAGTTAGCTATGCAAGCATATATACACTACTCATT
 
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rJMSF013J07- AATTATTAATTTGATCCCGGCCTGGCCTTCTCAATTTTTGACTACTATACTGTAGAAACG
                      ____________________________________________________________
consensus AATTATTAATTTGATCCCGGCCTGGCCTTCTCAATTTTTGACTACTATACTGTAGAAACG
 
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rJMSF013J07- ATGTCGGTGGCGGGGAGATTGAACAAGGAAATTAATTAATATAATTAGCNGCTGGGGGGT
                      ____________________________________________________________
consensus ATGTCGGTGGCGGGGAGATTGAACAAGGAAATTAATTAATATAATTAGCNGCTGGGGGGT
 
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rJMSF013J07- TTTGTGCACTACCTCAGATCTTCCAACGTAGTTAACTACTCTTGTGTTTGATGAATCTGA
JMSF049D17+ CCAACGTAGTTAACTACTCTTGTGTTTGATGAATCTGA
                      ____________________________________________________________
consensus TTTGTGCACTACCTCAGATCTTCCAACGTAGTTAACTACTCTTGTGTTTGATGAATCTGA
 
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rJMSF013J07- ATAAGTAGTTGATTTTTCATGCTTCTTAACCGGCCCTGACGATGATGATGATGATAATTG
JMSF049D17+ ATAAGTAGTTGATTTTTCATGCTTCTTAACCGGCCCTGACGATGATGATGATGATAATTG
                      ____________________________________________________________
consensus ATAAGTAGTTGATTTTTCATGCTTCTTAACCGGCCCTGACGATGATGATGATGATAATTG
 
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rJMSF013J07- CTGCTGCGAATGCCTCTTTGCCCATAA
JMSF049D17+ CTGCTGCGAATGCCTCTTTGCCCATAACCCCTTCATTACTTCTGAATTCAAAACCAACCC
                      ____________________________________________________________
consensus CTGCTGCGAATGCCTCTTTGCCCATAACCCCTTCATTACTTCTGAATTCAAAACCAACCC
 
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JMSF049D17+ ATTAACAATATAATTAAAACTATACATACATACATACATACGGCGGAATAATATAATATA
                      ____________________________________________________________
consensus ATTAACAATATAATTAAAACTATACATACATACATACATACGGCGGAATAATATAATATA
 
. : . : . : . : . : . :
JMSF049D17+ TTAAGAAGGAATTGAAAAACATAAATAATTATTAATTAGTATGTAAAGCTAGCTAGGGCG
                      ____________________________________________________________
consensus TTAAGAAGGAATTGAAAAACATAAATAATTATTAATTAGTATGTAAAGCTAGCTAGGGCG
 
. : . : . : . : . : . :
JMSF049D17+ GAAATTAAAACGCCAACTAACCTTGAGCGGTTACTAGTCTATAAACATGTCCAAGAACAA
                      ____________________________________________________________
consensus GAAATTAAAACGCCAACTAACCTTGAGCGGTTACTAGTCTATAAACATGTCCAAGAACAA
 
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JMSF049D17+ GAGTGTCTGTTGGCTTGAGGAGCTTAATACGTGTAATCCTCCGAAGTGGCGGGATATTAT
                      ____________________________________________________________
consensus GAGTGTCTGTTGGCTTGAGGAGCTTAATACGTGTAATCCTCCGAAGTGGCGGGATATTAT
 
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JMSF049D17+ TNTTGGTATTGTTGGTGGCGGTGGTGGTAGTAGTAAGGAGAAGAGCGACATAGNGGCCGG
                      ____________________________________________________________
consensus TNTTGGTATTGTTGGTGGCGGTGGTGGTAGTAGTAAGGAGAAGAGCGACATAGNGGCCGG
 
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JMSF049D17+ GANTGGTGTTCATGATCTGGGTGGCGGAGAGAGGCCAATAGTGCTNCTNTACTCTCCCGC
                      ____________________________________________________________
consensus GANTGGTGTTCATGATCTGGGTGGCGGAGAGAGGCCAATAGTGCTNCTNTACTCTCCCGC