Contig 009566:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013J07Sequence254006442 (3)ref|XP_010254684.1|60.5PREDICTED: uncharacterized protein LOC104595592 [Nelumbo nucifera]688009566 (2)
JMSF049D17Sequence518009566 (2)ref|XP_011028607.1|65.9PREDICTED: uncharacterized protein LOC105128582 [Populus euphratica]763013674 (4)ref|XP_007026017.1|3e-93Beta glucosidase 46 isoform 1 [Theobroma cacao] gb|EOY28639.1| Beta glucosidase

Alignment

This contig is upended


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rJMSF013J07-                                                        TTTTAATAAATACG
                      ____________________________________________________________
consensus                                                           TTTTAATAAATACG
 
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rJMSF013J07-          ACAATATTAATGAGGTACAAATATTACAGCTAGATAGATTACAGAATATATATTGATGTG
                      ____________________________________________________________
consensus             ACAATATTAATGAGGTACAAATATTACAGCTAGATAGATTACAGAATATATATTGATGTG
 
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rJMSF013J07-          ATGAATCTGATCTGCTGGTACAAATTAAAATAAAGAAACTAAGTAAGTAACTGTAATTGA
                      ____________________________________________________________
consensus             ATGAATCTGATCTGCTGGTACAAATTAAAATAAAGAAACTAAGTAAGTAACTGTAATTGA
 
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rJMSF013J07-          AATTGTATGTGGAAGTAATTAATGAGGTAGCTAGCTAGCTAACTCCGGCGGCGGCCTCGG
                      ____________________________________________________________
consensus             AATTGTATGTGGAAGTAATTAATGAGGTAGCTAGCTAGCTAACTCCGGCGGCGGCCTCGG
 
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rJMSF013J07-          AGATGCTCAGTAGTGAGGGTTGCCATGCGCCTTTGCATCTGCCTCCTCCTCCTCCTGCTC
                      ____________________________________________________________
consensus             AGATGCTCAGTAGTGAGGGTTGCCATGCGCCTTTGCATCTGCCTCCTCCTCCTCCTGCTC
 
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rJMSF013J07-          CTGCTGCAGAAGAAGAAGACCTATGCCTCCTTTCATGCTTTACATGCTGCTGCATATATA
                      ____________________________________________________________
consensus             CTGCTGCAGAAGAAGAAGACCTATGCCTCCTTTCATGCTTTACATGCTGCTGCATATATA
 
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rJMSF013J07-          CATTTAATCATTTAATTTCTTTTTATAGTTAGCTATGCAAGCATATATACACTACTCATT
                      ____________________________________________________________
consensus             CATTTAATCATTTAATTTCTTTTTATAGTTAGCTATGCAAGCATATATACACTACTCATT
 
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rJMSF013J07-          AATTATTAATTTGATCCCGGCCTGGCCTTCTCAATTTTTGACTACTATACTGTAGAAACG
                      ____________________________________________________________
consensus             AATTATTAATTTGATCCCGGCCTGGCCTTCTCAATTTTTGACTACTATACTGTAGAAACG
 
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rJMSF013J07-          ATGTCGGTGGCGGGGAGATTGAACAAGGAAATTAATTAATATAATTAGCNGCTGGGGGGT
                      ____________________________________________________________
consensus             ATGTCGGTGGCGGGGAGATTGAACAAGGAAATTAATTAATATAATTAGCNGCTGGGGGGT
 
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rJMSF013J07-          TTTGTGCACTACCTCAGATCTTCCAACGTAGTTAACTACTCTTGTGTTTGATGAATCTGA
JMSF049D17+                                 CCAACGTAGTTAACTACTCTTGTGTTTGATGAATCTGA
                      ____________________________________________________________
consensus             TTTGTGCACTACCTCAGATCTTCCAACGTAGTTAACTACTCTTGTGTTTGATGAATCTGA
 
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rJMSF013J07-          ATAAGTAGTTGATTTTTCATGCTTCTTAACCGGCCCTGACGATGATGATGATGATAATTG
JMSF049D17+           ATAAGTAGTTGATTTTTCATGCTTCTTAACCGGCCCTGACGATGATGATGATGATAATTG
                      ____________________________________________________________
consensus             ATAAGTAGTTGATTTTTCATGCTTCTTAACCGGCCCTGACGATGATGATGATGATAATTG
 
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rJMSF013J07-          CTGCTGCGAATGCCTCTTTGCCCATAA                                 
JMSF049D17+           CTGCTGCGAATGCCTCTTTGCCCATAACCCCTTCATTACTTCTGAATTCAAAACCAACCC
                      ____________________________________________________________
consensus             CTGCTGCGAATGCCTCTTTGCCCATAACCCCTTCATTACTTCTGAATTCAAAACCAACCC
 
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JMSF049D17+           ATTAACAATATAATTAAAACTATACATACATACATACATACGGCGGAATAATATAATATA
                      ____________________________________________________________
consensus             ATTAACAATATAATTAAAACTATACATACATACATACATACGGCGGAATAATATAATATA
 
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JMSF049D17+           TTAAGAAGGAATTGAAAAACATAAATAATTATTAATTAGTATGTAAAGCTAGCTAGGGCG
                      ____________________________________________________________
consensus             TTAAGAAGGAATTGAAAAACATAAATAATTATTAATTAGTATGTAAAGCTAGCTAGGGCG
 
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JMSF049D17+           GAAATTAAAACGCCAACTAACCTTGAGCGGTTACTAGTCTATAAACATGTCCAAGAACAA
                      ____________________________________________________________
consensus             GAAATTAAAACGCCAACTAACCTTGAGCGGTTACTAGTCTATAAACATGTCCAAGAACAA
 
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JMSF049D17+           GAGTGTCTGTTGGCTTGAGGAGCTTAATACGTGTAATCCTCCGAAGTGGCGGGATATTAT
                      ____________________________________________________________
consensus             GAGTGTCTGTTGGCTTGAGGAGCTTAATACGTGTAATCCTCCGAAGTGGCGGGATATTAT
 
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JMSF049D17+           TNTTGGTATTGTTGGTGGCGGTGGTGGTAGTAGTAAGGAGAAGAGCGACATAGNGGCCGG
                      ____________________________________________________________
consensus             TNTTGGTATTGTTGGTGGCGGTGGTGGTAGTAGTAAGGAGAAGAGCGACATAGNGGCCGG
 
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JMSF049D17+           GANTGGTGTTCATGATCTGGGTGGCGGAGAGAGGCCAATAGTGCTNCTNTACTCTCCCGC
                      ____________________________________________________________
consensus             GANTGGTGTTCATGATCTGGGTGGCGGAGAGAGGCCAATAGTGCTNCTNTACTCTCCCGC