Contig 009560:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN033D17Sequence609009560 (2)ref|XP_011085433.1|3e-15PREDICTED: oxygen-evolving enhancer protein 2-1, chloroplastic-like [Sesamum in
JMSF048N04Sequence619009560 (2)ref|XP_011085433.1|3e-15PREDICTED: oxygen-evolving enhancer protein 2-1, chloroplastic-like [Sesamum in788000179 (120)ref|XP_010093189.1|8e-110Oxygen-evolving enhancer protein 2 [Morus notabilis] gb|EXB53677.1| Oxygen-evolv

Alignment

This contig is upended


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JMFN033D17+                                   GTGTTTGTTTTCGGCTTTCCGAAAACATTCGCTGCA
JMSF048N04+                                                    TCCGAAAACATTCGCTGCA
                      ____________________________________________________________
consensus                                     GTGTTTGTTTTCGGCTTTCCGAAAACATTCGCTGCA
 
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JMFN033D17+           ATCCACCATCAACATTAGCATCCAAAGACTCTAAGGATACCGGTGGTAGGCTCTCGATGG
JMSF048N04+           ATCCACCATCAACATTAGCATCCAAAGACTCTAAGGATACCGGTGGTAGGCTCTCGATGG
                      ____________________________________________________________
consensus             ATCCACCATCAACATTAGCATCCAAAGACTCTAAGGATACCGGTGGTAGGCTCTCGATGG
 
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JMFN033D17+           ATCGACGATCCATCCTCACATACTCAATCAAGCTTAAACTAAGAGATAATTGACACTAAA
JMSF048N04+           ATCGACGATCCATCCTCACATACTCAATCAAGCTTAAACTAAGAGATAATTGACACTAAA
                      ____________________________________________________________
consensus             ATCGACGATCCATCCTCACATACTCAATCAAGCTTAAACTAAGAGATAATTGACACTAAA
 
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JMFN033D17+           TAATCTGATTGTTATGTGTCTAGCAAATACGATTAACGATTCCGGCACACATTTTAACTC
JMSF048N04+           TAATCTGATTGTTATGTGTCTAGCAAATACGATTAACGATTCCGGCACACATTTTAACTC
                      ____________________________________________________________
consensus             TAATCTGATTGTTATGTGTCTAGCAAATACGATTAACGATTCCGGCACACATTTTAACTC
 
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JMFN033D17+           GTTCAATCCAATCATAACTACAATCAAAATCATTACCAGAAACAGTACAGTGACTGAAAA
JMSF048N04+           GTTCAATCCAATCATAACTACAATCAAAATCATTACCAGAAACAGTACAGTGACTGAAAA
                      ____________________________________________________________
consensus             GTTCAATCCAATCATAACTACAATCAAAATCATTACCAGAAACAGTACAGTGACTGAAAA
 
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JMFN033D17+           GGAGATAAACAATTAACGAATGAGGAGAAGCATGTACCGGCTTCACCGTAGGCGGCGTCG
JMSF048N04+           GGAGATAAACAATTAACGAATGAGGAGAAGCATGTACCGGCTTCACCGTAGGCGGCGTCG
                      ____________________________________________________________
consensus             GGAGATAAACAATTAACGAATGAGGAGAAGCATGTACCGGCTTCACCGTAGGCGGCGTCG
 
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JMFN033D17+           GCAGGGGAAACCTTAGAGCCAACAGCGGCAGCGCCGATGAGGACGGTGAGAGCCAATCGG
JMSF048N04+           GCAGGGGAAACCTTAGAGCCAACAGCGGCAGCGCCGATGAGGACGGTGAGAGCCAATCGG
                      ____________________________________________________________
consensus             GCAGGGGAAACCTTAGAGCCAACAGCGGCAGCGCCGATGAGGACGGTGAGAGCCAATCGG
 
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JMFN033D17+           CGAGAGACGGCGACCGAAGAGGCGGCGTCGTCTTCATGAGCCGAGGCGGACTGCTTCTGA
JMSF048N04+           CGAGAGACGGCGACCGAAGAGGCGGCGTCGTCTTCATGAGCCGAGGCGGACTGCTTCTGA
                      ____________________________________________________________
consensus             CGAGAGACGGCGACCGAAGAGGCGGCGTCGTCTTCATGAGCCGAGGCGGACTGCTTCTGA
 
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JMFN033D17+           GCGCGGCAGACAAGCTGGTTAGGCTTCAGTACCGGAACGTAACGGTTCGAGGAAGATGGC
JMSF048N04+           GCGCGGCAGACAAGCTGGTTAGGCTTCAGTACCGGAACGTAACGGTTCGAGGAAGATGGC
                      ____________________________________________________________
consensus             GCGCGGCAGACAAGCTGGTTAGGCTTCAGTACCGGAACGTAACGGTTCGAGGAAGATGGC
 
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JMFN033D17+           CTAGCAGGGGCAGAGAGTGCAGGGTGGTGCAAGTAGAAGCACTGTGTGGAAGCCATGATC
JMSF048N04+           CTAGCAGGGGCAGAGAGTGCAGGGTGGTGCAAGTAGAAGCACTGTGTGGAAGCCATGATC
                      ____________________________________________________________
consensus             CTAGCAGGGGCAGAGAGTGCAGGGTGGTGCAAGTAGAAGCACTGTGTGGAAGCCATGATC
 
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JMFN033D17+           GCGCGCGGAGGAGCTTACTGTCTTGTCTGTCTG                           
JMSF048N04+           GCGCGCGGAGGAGCTTACTGTCTTGTCTGTCTGTCTGTCTCGCCGCTTTAGCTTAGCTTC
                      ____________________________________________________________
consensus             GCGCGCGGAGGAGCTTACTGTCTTGTCTGTCTGTCTGTCTCGCCGCTTTAGCTTAGCTTC