Contig 009559:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF048M11+            CTGGAGACTGATTATCTCTCTCTCCGTTATACATTTTTGAAGGAGACCTTTCAGATTGA
                      ____________________________________________________________
consensus              CTGGAGACTGATTATCTCTCTCTCCGTTATACATTTTTGAAGGAGACCTTTCAGATTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF048M11+           CCTAAAACTTCCATCTCAGGTTTAGACGAATCAACCATTTTACGAGGGTAAGGATGCAAA
                      ____________________________________________________________
consensus             CCTAAAACTTCCATCTCAGGTTTAGACGAATCAACCATTTTACGAGGGTAAGGATGCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018P03+                                                                     AA
JMSF048M11+           GGTTTCTTCTTAGGCCGAGGAGGAGGGATCTCTATGGGTCCATCACCATCATTCCCCAAA
                      ____________________________________________________________
consensus             GGTTTCTTCTTAGGCCGAGGAGGAGGGATCTCTATGGGTCCATCACCATCATTCCCCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018P03+           TCACGAACAACCTTGGTGAAAAACTTCTGAGCATGGCTTCGAATCTGAATCACAGTTTTT
JMSF048M11+           TCACGAACAACCTTGGTGAAAAACTTCTGAGCATGGCTTCGAATCTGAATCACAGTTTTT
                      ____________________________________________________________
consensus             TCACGAACAACCTTGGTGAAAAACTTCTGAGCATGGCTTCGAATCTGAATCACAGTTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018P03+           GTACCAACATGTTCTTCTATCTTACGCCATGCACGCCCATACAACTTCAAGGCTTCAACA
JMSF048M11+           GTACCAACATGTTCTTCTATCTTACGCCATGCACGCCCATACAACTTCAAGGCTTCAACA
                      ____________________________________________________________
consensus             GTACCAACATGTTCTTCTATCTTACGCCATGCACGCCCATACAACTTCAAGGCTTCAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018P03+           AACCTTTGGTGTTCTTCCTCTGTCCATCTCTCTCGCTGTTTTGTTATGGTATAAGGTTTC
JMSF048M11+           AACCTTTGGTGTTCTTCCTCTGTCCATCTCTCTCGCTGTTTTGTTATGGTATAAGGTTTC
                      ____________________________________________________________
consensus             AACCTTTGGTGTTCTTCCTCTGTCCATCTCTCTCGCTGTTTTGTTATGGTATAAGGTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018P03+           CTCACCTTTGGCAAGTATTCACTCCCTAAAGAACTTGAGACCCCAGCCTGTGTGGTCATA
JMSF048M11+           CTCACCTTTGGCAAGTATTCACTCCCTAAAGAACTTGAGACCCCAGCCTGTGTGGTCATA
                      ____________________________________________________________
consensus             CTCACCTTTGGCAAGTATTCACTCCCTAAAGAACTTGAGACCCCAGCCTGTGTGGTCATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018P03+           GTTTCCACCTTACTGTTAACTGCAGAAGATACAGCCCCACTATTTCCATCAGACTGATCC
JMSF048M11+           GTTTCCACCTTACTGTTAACTGCAGAAGATACAGCCCCACTATTTCCATCAGACTGATCC
                      ____________________________________________________________
consensus             GTTTCCACCTTACTGTTAACTGCAGAAGATACAGCCCCACTATTTCCATCAGACTGATCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018P03+           ATAGCCTCGGCCACCATAGTTGCAGAAATCTCTACAAAAGGGAGTTTTGAGAAGAAGAGG
JMSF048M11+           ATAGCCTCGGCCACCATAGTTGCAGAAATCTCTACAAAAGGGAGTTTTGAGAAGAAGAGG
                      ____________________________________________________________
consensus             ATAGCCTCGGCCACCATAGTTGCAGAAATCTCTACAAAAGGGAGTTTTGAGAAGAAGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018P03+           AAGAAAGAAAAAGAAAGAGCTTTTCACTTCTGCCAATCAAAAAACCATTTCGCAAGTGTG
JMSF048M11+           AAGAAAGAAAAAGAAAGAGCTTTTCACTTCTGCCAATCAAAAAACCATTTCGCAAGTGTG
                      ____________________________________________________________
consensus             AAGAAAGAAAAAGAAAGAGCTTTTCACTTCTGCCAATCAAAAAACCATTTCGCAAGTGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF018P03+           AAAAGCCAAAGAAGGAAAGAGGGGATCCCAAAAATGGGAAAAACAGTAGA          
JMSF048M11+           AAAAGCCAAAGAAGGAAAGAGGGGATCCCAAAAATGGGAAAAACAGTAGAGGTGAGAATC
                      ____________________________________________________________
consensus             AAAAGCCAAAGAAGGAAAGAGGGGATCCCAAAAATGGGAAAAACAGTAGAGGTGAGAATC