Contig 009555:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF028P02Sequence662009555 (3)ref|XP_004249844.1|2e-33PREDICTED: TBC1 domain family member 22B [Solanum lycopersicum] ref|XP_010312448766005711 (3)gb|KDP43912.1|1e-121hypothetical protein JCGZ_20922 [Jatropha curcas]
JMSF032F14Sequence712009555 (3)ref|XP_011091604.1|9e-86PREDICTED: GTPase-activating protein GYP1-like [Sesamum indicum] ref|XP_01109160724005711 (3)gb|KDP43912.1|3e-111hypothetical protein JCGZ_20922 [Jatropha curcas]
JMSF048G06Sequence685009555 (3)ref|XP_004249844.1|2e-59PREDICTED: TBC1 domain family member 22B [Solanum lycopersicum] ref|XP_010312448804005711 (3)gb|KDP43912.1|2e-148hypothetical protein JCGZ_20922 [Jatropha curcas]

Alignment

This contig is upended


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JMSF032F14+                                                   GGACAATCAACAGAAATCTG
                      ____________________________________________________________
consensus                                                     GGACAATCAACAGAAATCTG
 
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JMSF032F14+           CCGGAGCATGTTTATCTCTTCATTTGTGCGCTCAGTGTCTGGAACATCATAATACTGAGC
                      ____________________________________________________________
consensus             CCGGAGCATGTTTATCTCTTCATTTGTGCGCTCAGTGTCTGGAACATCATAATACTGAGC
 
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JMSF032F14+           AACACAATCAAGATACTCAAGGCGCTTTCTTGCCAAAACTCCCTCCCTTCTATCTGAATT
                      ____________________________________________________________
consensus             AACACAATCAAGATACTCAAGGCGCTTTCTTGCCAAAACTCCCTCCCTTCTATCTGAATT
 
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JMSF032F14+           AGGGGGTGCATATCCCAAAATAAGCCTCCAAACAGCTGGCCGCAAATATGGCGGAACACC
                      ____________________________________________________________
consensus             AGGGGGTGCATATCCCAAAATAAGCCTCCAAACAGCTGGCCGCAAATATGGCGGAACACC
 
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JMSF032F14+           ACTCTAAGCTAATTCACGCAGTTTTTCTAAGATAACAGTTGGTGACGACAGTTCTTTGGT
JMSF028P02+                                     CTAAGATAACAGTTGGTGACGACAGTTCTTTGGT
JMSF048G06+                                     CTAAGATAACAGTTGGTGACGACAGTTCTTTGGT
                      ____________________________________________________________
consensus             ACTCTAAGCTAATTCACGCAGTTTTTCTAAGATAACAGTTGGTGACGACAGTTCTTTGGT
 
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JMSF032F14+           GAACTTCATTAACCTAGCCGAATCTGTAGCTCTAGAACCCATGGGGGACTTTGGAATATC
JMSF028P02+           GAACTTCATTAACCTAGCCGAATCTGTAGCTCTAGAACCCATGGGGGACTTTGGAATATC
JMSF048G06+           GAACTTCATTAACCTAGCCGAATCTGTAGCTCTAGAACCCATGGGGGACTTTGGAATATC
                      ____________________________________________________________
consensus             GAACTTCATTAACCTAGCCGAATCTGTAGCTCTAGAACCCATGGGGGACTTTGGAATATC
 
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JMSF032F14+           AATGTACTTCAGTTCTGGATTTGGTGTTGATGATTTCATCTTGTTAACAGGTGAACTAGA
JMSF028P02+           AATGTACTTCAGTTCTGGATTTGGTGTTGATGATTTCATCTTGTTAACAGATGAACTAGA
JMSF048G06+           AATGTACTTCAGTTCTGGATTTGGTGTTGATGATTTCATCTTGTTAACAGATGAACTAGA
                      ____________________________________________________________
consensus             AATGTACTTCAGTTCTGGATTTGGTGTTGATGATTTCATCTTGTTAACAGATGAACTAGA
 
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JMSF032F14+           TTCTGAATTCCTTCTTTTTTGTACTTCCTCAAAAGATCCATCCATTTGTTCACTTGACCC
JMSF028P02+           TTCTGAATTCCTTCTTTTTTGTACTTCCTCAAAAGATCCATCCATTTGTTCACTTGACCC
JMSF048G06+           TTCTGAATTCCTTCTTTTTTGTACTTCCTCAAAAGATCCATCCATTTGTTCACTTGACCC
                      ____________________________________________________________
consensus             TTCTGAATTCCTTCTTTTTTGTACTTCCTCAAAAGATCCATCCATTTGTTCACTTGACCC
 
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JMSF032F14+           TGCCTCGGTATCTGACATTCTCCTGCCACTACTTGGGGAACATAAAGTTGAGGCATCCAA
JMSF028P02+           TGCCTCGGTATCTGACATTCTCCTGCCACTACTTGGGGAACATAAAGTTGAGGCATCCAA
JMSF048G06+           TGCCTCGGTATCTGACATTCTCCTGCCACTACTTGGGGAACATAAAGTTGAGGCATCCAA
                      ____________________________________________________________
consensus             TGCCTCGGTATCTGACATTCTCCTGCCACTACTTGGGGAACATAAAGTTGAGGCATCCAA
 
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JMSF032F14+           CGGGTCATCCCTCTGTGTTATCAATACTTTGCCAGGAAAACTACGACCTTTCAGTAACCC
JMSF028P02+           CGGGTCATCCCTCTGTGTTATCAATACTTTGCCAGGAAAACTACGACCTTTCAGTAACCC
JMSF048G06+           CGGGTCATCCCTCTGTGTTATCAATACTTTGCCAGGAAAACTACGACCTTTCAGTAACCC
                      ____________________________________________________________
consensus             CGGGTCATCCCTCTGTGTTATCAATACTTTGCCAGGAAAACTACGACCTTTCAGTAACCC
 
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JMSF032F14+           TTGAACATTTCGGAGAGTTTGATTGAGGCGAGAATCGGGACTTGGCGGAGTATCCTTGCT
JMSF028P02+           TTGAACATTTCGGAGAGTTTGATTGAGGCGAGAATTGGGACTTGGTGGAGTATCCTTGCT
JMSF048G06+           TTGAACATTTCGGAGAGTTTGATTGAGGCGAGAATCGGGACTTGGTGGAGTATCCTTGCT
                      ____________________________________________________________
consensus             TTGAACATTTCGGAGAGTTTGATTGAGGCGAGAATCGGGACTTGGTGGAGTATCCTTGCT
 
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JMSF032F14+           GCTGTTACTCCTCCTCATCATCCTTAATTCAGAATCCTACACCACCGCCTCCTCTTTCCA
JMSF028P02+           GCTGTTACTCCTCCTCATCATCCTTAATTCAGAATCCTACACCACCGCCTCCTCTTTCCA
JMSF048G06+           GCTGTTACTCCTCCTCATCATCCTTAATTCAGAATCCTACACCACCGCCTCCTCTTTCCA
                      ____________________________________________________________
consensus             GCTGTTACTCCTCCTCATCATCCTTAATTCAGAATCCTACACCACCGCCTCCTCTTTCCA
 
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JMSF032F14+           TATATCTGCTCTCGCTGAAACGCTCACTC                               
JMSF028P02+           TATATCTGCTCTCGCTGAAACGCTCACTCTCACTTCACTTCAAATCTAAGCTA       
JMSF048G06+           TATATCTGCTCTCGCTGAAACGCTCACTCTCACTTCACTTCAAATCTAAGCTACAGCTTT
                      ____________________________________________________________
consensus             TATATCTGCTCTCGCTGAAACGCTCACTCTCACTTCACTTCAAATCTAAGCTACAGCTTT
 
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JMSF048G06+           AATCTATTACCGAGTATTACTTGTACAAGTAACAGATCCACTGCCTTTCATGGAGCCATC
                      ____________________________________________________________
consensus             AATCTATTACCGAGTATTACTTGTACAAGTAACAGATCCACTGCCTTTCATGGAGCCATC