Contig 009554:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS029B11+                     CATCACTTTCAAGTATATCATCTTCGTACTTATCTCGATCACCAGAACCA
                      ____________________________________________________________
consensus                       CATCACTTTCAAGTATATCATCTTCGTACTTATCTCGATCACCAGAACCA
 
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JMFS029B11+           TCCCTTCTCTTCCGCATCTTTTTCTCAGCATCTCTATCTTGATCAGAATTGCGCACCTCA
JMFS139H12+                                                  TGATCAGAATTGCGCACCTCA
                      ____________________________________________________________
consensus             TCCCTTCTCTTCCGCATCTTTTTCTCAGCATCTCTATCTTGATCAGAATTGCGCACCTCA
 
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JMFS029B11+           CTCCGTATTGATCGATCAGTATTTTCTTTACTGCGCTTGCTCTGCTTCTCCTCATCTCCT
JMFS139H12+           CTCCGTATTGATCGATCAGTATTTTCTTTACTGCGCTTGCTCTGCTTCTCCTCATCTCCT
                      ____________________________________________________________
consensus             CTCCGTATTGATCGATCAGTATTTTCTTTACTGCGCTTGCTCTGCTTCTCCTCATCTCCT
 
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JMFS029B11+           GACTGAGACCATATCTTCTTTTCTGTGTCTCCACTGTAGCCTCTTACTTCAGTTTCACGT
JMFS139H12+           GACTGAGACCATATCTTCTTTTCTGTGTCTCCACTGTAGCCTCTTACTTCAGTTTCACGT
                      ____________________________________________________________
consensus             GACTGAGACCATATCTTCTTTTCTGTGTCTCCACTGTAGCCTCTTACTTCAGTTTCACGT
 
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JMFS029B11+           TTACTATCCTGCTTCCTCTCCCTTTCTGATCCATGCTCCTTTTCCTTCAAATCCTTGCCC
JMFS139H12+           TTACTATCCTGCTTCCTCTCCCTTTCTGATCCATGCTCCTTTTCCTTCAAATCCTTGCCC
                      ____________________________________________________________
consensus             TTACTATCCTGCTTCCTCTCCCTTTCTGATCCATGCTCCTTTTCCTTCAAATCCTTGCCC
 
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JMFS029B11+           TCTTTCCGAACGGAATCAGTTTCTGATTTCTTCTTAGACTCACCCTTGCCACTCTTAGCC
JMFS139H12+           TCTTTCCGAACGGAATCAGTTTCTGATTTCTTCTTAGACTCACCCTTGCCACTCTTAGCC
                      ____________________________________________________________
consensus             TCTTTCCGAACGGAATCAGTTTCTGATTTCTTCTTAGACTCACCCTTGCCACTCTTAGCC
 
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JMFS029B11+           TCTTCTTTCTCCACTCCAGACAGTACAATCTCACTTCCACCGCCACTCTCATGCCTTTTA
JMFS139H12+           TCTTCTTTCTCCACTCCAGACAGTACAATCTCACTTCCACCGCCACTCTCATGCCTTTTA
                      ____________________________________________________________
consensus             TCTTCTTTCTCCACTCCAGACAGTACAATCTCACTTCCACCGCCACTCTCATGCCTTTTA
 
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JMFS029B11+           CTACTTTTACTCTTCGAATCACCATAACCTTTTGCTTCCTTCTGCTTCAATCCCTTCTCT
JMFS139H12+           CTACTTTTACTCTTCGAATCACCATAACCTTTTGCTTCCTTCTGCTTCAATCCCTTCTCT
                      ____________________________________________________________
consensus             CTACTTTTACTCTTCGAATCACCATAACCTTTTGCTTCCTTCTGCTTCAATCCCTTCTCT
 
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JMFS029B11+           TGATCAGTTTTTGAACTTCCTGCCTTGCTCTCTTTCTCCGCTGCATGCCGACCATCGCCA
JMFS139H12+           TGATCAGTTTTTGAACTTCCTGCCTTGCTCTCTTTCTCCGCTGCATGCCGACCATCGCCA
                      ____________________________________________________________
consensus             TGATCAGTTTTTGAACTTCCTGCCTTGCTCTCTTTCTCCGCTGCATGCCGACCATCGCCA
 
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JMFS029B11+           CTCTCATCCACACCGCCATTCCACCTATCACCGCCACCACTTCCTTCGCCCTTCTCCTTC
JMFS139H12+           CTCTCATCCACACCGCCATTCCACCTATCACCGCCACCACTTCCTTCGCCCTTCTCCTTC
JMFS098E07+                                                                 TCCTTC
                      ____________________________________________________________
consensus             CTCTCATCCACACCGCCATTCCACCTATCACCGCCACCACTTCCTTCGCCCTTCTCCTTC
 
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JMFS029B11+           CGCCGCTTCGTCGAAAG                                           
JMFS139H12+           CGCCGCTTCGTCGAAAGGTACTCCTCCGGAGCATCCCCATTCCCATAACCACTCAGATCT
JMFS098E07+           CGCCGCTTCGTCGAAAGGTACTCCTCCGGAGCATCCCCATTCCCATAACCACTCAGATCT
JMSF048E12+                                 CCTCCGGAGCATCCCCATTCCCATAACCACTCAGATCT
                      ____________________________________________________________
consensus             CGCCGCTTCGTCGAAAGGTACTCCTCCGGAGCATCCCCATTCCCATAACCACTCAGATCT
 
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JMFS139H12+           TTGCTCTCTCTCCCCTCTCTCGACTGCGACGAAAGCTTCCGCTTCTC             
JMFS098E07+           TTGCTCTCTCTCCCCTCTCTCGACTGCGACGAAAGCTTCCGCTTCTCACCAGAAGCCAAA
JMSF048E12+           TTGCTCTCTCTCCCCTCTCTCGACTGCGACGAAAGCTTCCGCTTCTCACCAGAAGCCAAA
                      ____________________________________________________________
consensus             TTGCTCTCTCTCCCCTCTCTCGACTGCGACGAAAGCTTCCGCTTCTCACCAGAAGCCAAA
 
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JMFS098E07+           TCCTTAGAAACCCTAGACGAACTCTCCTTCATCTTCACATCCTCCTCCGAGTCGGAGTAC
JMSF048E12+           TCCTTAGAAACCCTAGACGAACTCTCCTTCATCTTCACATCCTCCTCCGAGTCGGAGTAC
                      ____________________________________________________________
consensus             TCCTTAGAAACCCTAGACGAACTCTCCTTCATCTTCACATCCTCCTCCGAGTCGGAGTAC
 
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JMFS098E07+           TCCCTCGCCTCCTTCGAATGCTTACTCGGCTTATGCGATTTACTCTTAGAACTCCGAGGC
JMSF048E12+           TCCCTCGCCTCCTTCGAATGCTTACTCGGCTTATGCGATTTACTCTTAGAACTCCGAGGC
                      ____________________________________________________________
consensus             TCCCTCGCCTCCTTCGAATGCTTACTCGGCTTATGCGATTTACTCTTAGAACTCCGAGGC
 
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JMFS098E07+           ATAACTGTAATTTCACTAAAAAAATTTCCCTAAACACCTTAAAACCTTAAAACTTTTTTT
JMSF048E12+           ATAACTGTAATTTCACTAAAAAAATTTCCCTAAACACCTTAAAACCTTAAAACTTTTTTT
                      ____________________________________________________________
consensus             ATAACTGTAATTTCACTAAAAAAATTTCCCTAAACACCTTAAAACCTTAAAACTTTTTTT
 
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JMFS098E07+           ATTCCGCCCAAACCCTAGGTCCTATCCGCTACCACCAGCATAACCGCCACAACCATCCAG
JMSF048E12+           ATTCCGCCCAAACCCTAGGTCCTATCCGCTACCACCAGCATAACCGCCACAACCATCCAG
                      ____________________________________________________________
consensus             ATTCCGCCCAAACCCTAGGTCCTATCCGCTACCACCAGCATAACCGCCACAACCATCCAG
 
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JMFS098E07+           ATTCCGTCCCAATACACCACTCCAGCAAAATGCAAATCGGAACCGAAGATTCCTCGCCGG
JMSF048E12+           ATTCCGTCCCAATACACCACTCCAGCAAAATGCAAATCGGAACCGAAGATTCCTCGCCGG
                      ____________________________________________________________
consensus             ATTCCGTCCCAATACACCACTCCAGCAAAATGCAAATCGGAACCGAAGATTCCTCGCCGG
 
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JMFS098E07+           TTGACTTGCCGGAAAACGGATTTGACCTTTCAAATTGCTGGGTTGCGGCGACAGGCAGAT
JMSF048E12+           TTGACTTGCCGGAAAACGGATTTGACCTTTCAAATTGCTGGGTTGCGGCGACAGGTAGAT
                      ____________________________________________________________
consensus             TTGACTTGCCGGAAAACGGATTTGACCTTTCAAATTGCTGGGTTGCGGCGACAGGTAGAT
 
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JMFS098E07+           ACAGGCCGATTGCGGATACAGAGAGAGTAGGTGTATACACAGACGGAGAAGTGGACGGAG
JMSF048E12+           ACAGGCCGATTGCGGATACAGAGAGAGTAGGTGTATACACAGACGGAGAAGTGGACGGAG
                      ____________________________________________________________
consensus             ACAGGCCGATTGCGGATACAGAGAGAGTAGGTGTATACACAGACGGAGAAGTGGACGGAG
 
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JMFS098E07+           AGAAGAAGGACAGTAAAGATTGATACAGAAATGAAAATTGGGAGAAAAAGTGACGATAGG
JMSF048E12+           AGAAGAAGGACAGTAAAGATTGATACAGAAATGAAAATTGGGAGAAAAAGTGACGATAGG
                      ____________________________________________________________
consensus             AGAAGAAGGACAGTAAAGATTGATACAGAAATGAAAATTGGGAGAAAAAGTGACGATAGG
 
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JMFS098E07+           AATCTGAA                                                    
JMSF048E12+           AATCTGAACATATATGTTGACACCGGCAGCGGGTGAGGGAGAGATCGGAGGCGAAGGCCC
                      ____________________________________________________________
consensus             AATCTGAACATATATGTTGACACCGGCAGCGGGTGAGGGAGAGATCGGAGGCGAAGGCCC