Contig 009539:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF053O11+                                                          TCCACAAAGATTC
                      ____________________________________________________________
consensus                                                            TCCACAAAGATTC
 
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JMSF053O11+           TGAAGTATTTTTATTTCCCTTTTTATCTGCATCAATGAAAAAGCTTAAGCTTGAAGTTTT
JMSF046L23+                                   ATCTGCATCAATGAAAAAGCTTAAGCTTGAAGTTTT
                      ____________________________________________________________
consensus             TGAAGTATTTTTATTTCCCTTTTTATCTGCATCAATGAAAAAGCTTAAGCTTGAAGTTTT
 
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JMSF053O11+           TGGAGAGAGAAGTAACAGAATGATTCGGTACAACAAGATACAGTTAGAGAAAGGGCTACA
JMSF046L23+           TGGAGAGAGAAGTAACAGAATGATTCGGTACAACAAGATACAGTTAGAGAAAGGGCTACA
                      ____________________________________________________________
consensus             TGGAGAGAGAAGTAACAGAATGATTCGGTACAACAAGATACAGTTAGAGAAAGGGCTACA
 
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JMSF053O11+           GATACCACCAATATGAGTAGATTAAGCAAACAGATAAAGGATCACATTGGGTAGGTTTCA
JMSF046L23+           GATACCACCAATATGAGTAGATTAAGCAAACAGATAAAGGATCACATTGGGTAGGTTTCA
                      ____________________________________________________________
consensus             GATACCACCAATATGAGTAGATTAAGCAAACAGATAAAGGATCACATTGGGTAGGTTTCA
 
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JMSF053O11+           ATTATGCAATGACATTAAAAAAATAATAATAATAAATTTGTCATTAGATACAGTTGACTT
JMSF046L23+           ATTATGCAATGACATTAAAAAAATAATAATAATAAATTTGTCATTAGATACAGTTGACTT
                      ____________________________________________________________
consensus             ATTATGCAATGACATTAAAAAAATAATAATAATAAATTTGTCATTAGATACAGTTGACTT
 
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JMSF053O11+           GAGATATAGGTATATAACCACAATTTGGCACATGGAAAAAACCTTTGTTGAGGTATATAG
JMSF046L23+           GAGATATAGGTATATAACCACAATTTGGCACATGGAAAAAACCTTTGTTGAGGTATATAG
                      ____________________________________________________________
consensus             GAGATATAGGTATATAACCACAATTTGGCACATGGAAAAAACCTTTGTTGAGGTATATAG
 
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JMSF053O11+           TATATACTACAACTCTATAGAGAGGCAATTGAGAGGAAAAAGTGTATTCATAATTTGAAA
JMSF046L23+           TATATACTACAACTCTATAGAGAGGCAATTGAGAGGAAAAAGTGTATTCATAATTTGAAA
                      ____________________________________________________________
consensus             TATATACTACAACTCTATAGAGAGGCAATTGAGAGGAAAAAGTGTATTCATAATTTGAAA
 
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JMSF053O11+           TTGGAAAGCTAACATAGAGTACACCTTCTTCTTTTTCACGGGTTTAAGTATTTTGATGAT
JMSF046L23+           TTGGAAAGCTAACATAGAGTACACCTTCTTCTTTTTCACGGGTTTAAGTATTTTGATGAT
                      ____________________________________________________________
consensus             TTGGAAAGCTAACATAGAGTACACCTTCTTCTTTTTCACGGGTTTAAGTATTTTGATGAT
 
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JMSF053O11+           GCACTTCTCATTGTTGGTGATATTTACTCCTTCAAAGACCTCACTGTATTTTCCTCTTCC
JMSF046L23+           GCACTTCTCATTGTTGGTGATATTTACTCCTTCAAAGACCTCACTGTATTTTCCTCTTCC
                      ____________________________________________________________
consensus             GCACTTCTCATTGTTGGTGATATTTACTCCTTCAAAGACCTCACTGTATTTTCCTCTTCC
 
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JMSF053O11+           CACTTTCCGAACAACTTCATAGTCATCCTGATCACCCCATTGAACGGTAAGAGCTTCATA
JMSF046L23+           CACTTTCCGAACAACTTCATAGTCATCCTGATCACCCCATTGAACGGTAAGAGCTTCATA
                      ____________________________________________________________
consensus             CACTTTCCGAACAACTTCATAGTCATCCTGATCACCCCATTGAACGGTAAGAGCTTCATA
 
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JMSF053O11+           GTCCCAATAATCCTTAGGACGGTGAACGTTGACGTCAGCGTAGACTCGTGCTTGAGACAT
JMSF046L23+           GTCCCAATAATCCTTAGGACGGTGAACGTTGACGTCAGCGTAGACTCGTGCTTGAGACAT
                      ____________________________________________________________
consensus             GTCCCAATAATCCTTAGGACGGTGAACGTTGACGTCAGCGTAGACTCGTGCTTGAGACAT
 
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JMSF053O11+           ACCCGATTGCTCGCCGATGAGGCGAAGGATCTGAAGCTATAGTTCCTC            
JMSF046L23+           ACCCGATTGCTCGCCGATGAGGCGAAGGATCTGAAGCTATAGTTCCTCTCTCGCCCGCCA
                      ____________________________________________________________
consensus             ACCCGATTGCTCGCCGATGAGGCGAAGGATCTGAAGCTATAGTTCCTCTCTCGCCCGCCA
 
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JMSF046L23+           GCCAGCCAGCCAGCCTTTTTATATGTTGTCCCTCTCCACCCCACGTTCCCACGCCTGTTC
                      ____________________________________________________________
consensus             GCCAGCCAGCCAGCCTTTTTATATGTTGTCCCTCTCCACCCCACGTTCCCACGCCTGTTC