Contig 009537:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF046I23Sequence674009537 (2)ref|XP_004231534.1|8e-44PREDICTED: transport and Golgi organization 2 homolog [Solanum lycopersicum]754009537 (2)ref|XP_004231534.1|6e-97PREDICTED: transport and Golgi organization 2 homolog [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF046I23-            ATGATCATAATAGCAATACAACACAAATCCAAGTAAGTTTAAACAGAATCATAGAATT
                      ____________________________________________________________
consensus               ATGATCATAATAGCAATACAACACAAATCCAAGTAAGTTTAAACAGAATCATAGAATT
 
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rJMSF046I23-          TATGGGCCGGGGTTGGAGATTTCTCAATCTTGAAGGAAATGGTTTGTTCCTTCCACAAAT
                      ____________________________________________________________
consensus             TATGGGCCGGGGTTGGAGATTTCTCAATCTTGAAGGAAATGGTTTGTTCCTTCCACAAAT
 
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rJMSF046I23-          CATTCTCAAGACACATCTCATAGAAGTTGACCTCTAGGGAATTCTTGATAGCCAATGCAG
                      ____________________________________________________________
consensus             CATTCTCAAGACACATCTCATAGAAGTTGACCTCTAGGGAATTCTTGATAGCCAATGCAG
 
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rJMSF046I23-          AAGTACTTCTAGTGCCATAACGCCCCACCAAATCTTCTTCTGCTTCAACAAATATGGAAC
                      ____________________________________________________________
consensus             AAGTACTTCTAGTGCCATAACGCCCCACCAAATCTTCTTCTGCTTCAACAAATATGGAAC
 
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rJMSF046I23-          TATATTGGTACTCCCTTTCAGGTGCATAGATGCCAGGAAGAAGGTTCCTTTCCTCATCTT
                      ____________________________________________________________
consensus             TATATTGGTACTCCCTTTCAGGTGCATAGATGCCAGGAAGAAGGTTCCTTTCCTCATCTT
 
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rJMSF046I23-          TTGTTGTGTCTTTCATCAATTGTTTCCCCACTGACTCCAATGGAATTTCAGATTCACCAT
                      ____________________________________________________________
consensus             TTGTTGTGTCTTTCATCAATTGTTTCCCCACTGACTCCAATGGAATTTCAGATTCACCAT
 
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rJMSF046I23-          ATTCTTCCAACACCAACTTGAAACCTTTTTGTAACCGTTGAGCCTTAGGCCACGGAGAGT
                      ____________________________________________________________
consensus             ATTCTTCCAACACCAACTTGAAACCTTTTTGTAACCGTTGAGCCTTAGGCCACGGAGAGT
 
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rJMSF046I23-          CTAGTGATGCATTTGTCAAGACATGAATACCAGGCGATACCTCTGTCACTGATACACCTC
                      ____________________________________________________________
consensus             CTAGTGATGCATTTGTCAAGACATGAATACCAGGCGATACCTCTGTCACTGATACACCTC
 
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rJMSF046I23-          TGTCTTTTGGTCTGTTGGTTATATAAAACATGGTCATGGAACAGATATCAACTACTATCA
                      ____________________________________________________________
consensus             TGTCTTTTGGTCTGTTGGTTATATAAAACATGGTCATGGAACAGATATCAACTACTATCA
 
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rJMSF046I23-          GGTTAAACCCACCAAAATGGTCAGCTTCTGCCATAAGTTCCTCCGCGAAATCACGAGGGC
JMSF046I23+                                                         GAAATCACGAGGGC
                      ____________________________________________________________
consensus             GGTTAAACCCACCAAAATGGTCAGCTTCTGCCATAAGTTCCTCCGCGAAATCACGAGGGC
 
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rJMSF046I23-          TCTTATTGCTCCGTAAGAAGCGAACAGGAAGGTCTCCTCTGCTCTTGGTATGAGAAGACG
JMSF046I23+           TCTTATTGCTCCGTAAGAAGCGAACAGGAAGGTCTCCTCTGCTCTTGGTATGAGAAGACG
                      ____________________________________________________________
consensus             TCTTATTGCTCCGTAAGAAGCGAACAGGAAGGTCTCCTCTGCTCTTGGTATGAGAAGACG
 
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rJMSF046I23-          GCAAATCGACGACCTCCCGGACATTGGTAAGGAAAGCGATTTTTCCCTTGAGGTTACAGC
JMSF046I23+           GCAAATCGACGACCTCCCGGACATTGGTAAGGAAAGCGATTTTTCCCTTGAGGTTACAGC
                      ____________________________________________________________
consensus             GCAAATCGACGACCTCCCGGACATTGGTAAGGAAAGCGATTTTTCCCTTGAGGTTACAGC
 
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rJMSF046I23-          CTAGCCAAGTCCCACCGGCGAGAACGTCTCTTCCTC                        
JMSF046I23+           CTAGCCAAGTCCCACCGGCGAGAACGTCTCTTCCTCCAAGAATCACACCATCCTCCCACC
                      ____________________________________________________________
consensus             CTAGCCAAGTCCCACCGGCGAGAACGTCTCTTCCTCCAAGAATCACACCATCCTCCCACC
 
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JMSF046I23+           ACGCCAAAGCCTTCGTCGGCCGATCATAGTATTCGTCCCGGTTGAGGAACAGAAGAAAGG
                      ____________________________________________________________
consensus             ACGCCAAAGCCTTCGTCGGCCGATCATAGTATTCGTCCCGGTTGAGGAACAGAAGAAAGG
 
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JMSF046I23+           GGTAGATCGGATGAGCTTTCCATTGGAATGCAGCTATACACATTGTGTTTCATCAATTCA
                      ____________________________________________________________
consensus             GGTAGATCGGATGAGCTTTCCATTGGAATGCAGCTATACACATTGTGTTTCATCAATTCA
 
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JMSF046I23+           CACCAAAGCTAGAAGCGTTGACCTGAGGAAGCTGAATGGTCACTTTGTTTGGGAATAGGC
                      ____________________________________________________________
consensus             CACCAAAGCTAGAAGCGTTGACCTGAGGAAGCTGAATGGTCACTTTGTTTGGGAATAGGC
 
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JMSF046I23+           GACAAGGGGAGTGAGCAGTTTCACAGTCTTGGGTGTCTCTTTGCTTCTTTCATGCAATCT
                      ____________________________________________________________
consensus             GACAAGGGGAGTGAGCAGTTTCACAGTCTTGGGTGTCTCTTTGCTTCTTTCATGCAATCT
 
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JMSF046I23+           CCCAAAACTATCCAGGAAAGCAAGATCAAGTAGTGCTGTCTGGTTCCTTCAACCTTGGCT
                      ____________________________________________________________
consensus             CCCAAAACTATCCAGGAAAGCAAGATCAAGTAGTGCTGTCTGGTTCCTTCAACCTTGGCT
 
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JMSF046I23+           ACCGATTCTCATATGAGCGTCGTAAAAGATGTTAGATTAATGGCTAGACGAGTATGAACG
                      ____________________________________________________________
consensus             ACCGATTCTCATATGAGCGTCGTAAAAGATGTTAGATTAATGGCTAGACGAGTATGAACG
 
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JMSF046I23+           GAGGTCGAAACCGTTTGTTCTTGTGACTGGAGAAGTGATCGATAGAGGAGAGAGCGTTCA
                      ____________________________________________________________
consensus             GAGGTCGAAACCGTTTGTTCTTGTGACTGGAGAAGTGATCGATAGAGGAGAGAGCGTTCA
 
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JMSF046I23+           GACATGCGAGGGAGGCAACGGGAGAAGAAGATGAATGGAGGATGATGTCTGCGCAGAGAC
                      ____________________________________________________________
consensus             GACATGCGAGGGAGGCAACGGGAGAAGAAGATGAATGGAGGATGATGTCTGCGCAGAGAC