Contig 009536:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011M06Sequence408009536 (4)ref|XP_009785266.1|79.3PREDICTED: uncharacterized protein LOC104233553 [Nicotiana sylvestris]779011270 (4)ref|XP_009785266.1|293PREDICTED: uncharacterized protein LOC104233553 [Nicotiana sylvestris]
JMSF033E02Sequence724009536 (4)ref|XP_009785266.1|219PREDICTED: uncharacterized protein LOC104233553 [Nicotiana sylvestris]666011270 (4)ref|XP_009595166.1|261PREDICTED: uncharacterized protein LOC104091513 [Nicotiana tomentosiformis]
JMSF043A17Sequence684009536 (4)ref|XP_009785266.1|276PREDICTED: uncharacterized protein LOC104233553 [Nicotiana sylvestris]648011270 (4)ref|XP_009595166.1|197PREDICTED: uncharacterized protein LOC104091513 [Nicotiana tomentosiformis]
JMSF046G03Sequence764009536 (4)ref|XP_009595166.1|237PREDICTED: uncharacterized protein LOC104091513 [Nicotiana tomentosiformis]736011270 (4)ref|XP_009595166.1|288PREDICTED: uncharacterized protein LOC104091513 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF033E02+                                  CAATGAAGCCTGCNAATCCAAGGCTGCAGCAACAGGC
                      ____________________________________________________________
consensus                                    CAATGAAGCCTGCNAATCCAAGGCTGCAGCAACAGGC
 
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JMSF043A17+               TCTTATCCATGAACTCCAATAACCCCCATGGAGTCAAGTTATGTGGCCACTCAAGC
JMSF033E02+           AATATCTTATCCATGAACTCCAATAACCCCCATGGAGTCAAGTTATGTGGCCACTCAAGC
                      ____________________________________________________________
consensus             AATATCTTATCCATGAACTCCAATAACCCCCATGGAGTCAAGTTATGTGGCCACTCAAGC
 
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JMSF043A17+           AAAAATGCAACCACTCTCTTTAGGTCCTTGTTACTCAAATCGGATATCTGCTTCTCAGTA
JMSF033E02+           AAAAATGCAACCACTCTCTTTAGGTCCTTGTTACTCAAATCGGATATCTGCTTCTCAGTA
                      ____________________________________________________________
consensus             AAAAATGCAACCACTCTCTTTAGGTCCTTGTTACTCAAATCGGATATCTGCTTCTCAGTA
 
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JMSF043A17+           GAATGCTTATCCTCCCCGGTAGCATTATTATCAGCATCATCAATCACACAAGACGGAACA
JMSF033E02+           GAATGCTTATCCT-CCCGGTAGCATTATTATCAGCATCATCAATCACACAAGACGGAACA
                      ____________________________________________________________
consensus             GAATGCTTATCCTCCCCGGTAGCATTATTATCAGCATCATCAATCACACAAGACGGAACA
 
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JMSF043A17+           TTGAAAGGAACCAAAGGCATAGAAGCATTAGTAAATGAAGCATTGGGTTTTAACTTAACA
JMSF033E02+           TTGAAAGGAACCAAAGGCATAGAAGCATTAGTAAATGAAGCATTGGGTTTTAACTTAACA
                      ____________________________________________________________
consensus             TTGAAAGGAACCAAAGGCATAGAAGCATTAGTAAATGAAGCATTGGGTTTTAACTTAACA
 
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JMSF043A17+           ATGTTCGCAACTACGGTGGCTAGTAACAGCGCATAGCTCTGACCGGCATGAGTTCTCTCG
JMSF033E02+           ATGTTCGCAACTACGGTGGCTAGTAACAGCGCATAGCTCTGACCGGCATGAGTTCTCTCG
JMSF046G03+                           TGGCTAGTAACAGCGCATAGCTCTGACCGGCATGAGTTCTCTCG
                      ____________________________________________________________
consensus             ATGTTCGCAACTACGGTGGCTAGTAACAGCGCATAGCTCTGACCGGCATGAGTTCTCTCG
 
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JMSF043A17+           CTTTGTGATAAAGCCCATAGTTGCGATGCAACGTCCGAGAGTAAGCAAGGGAAAGCGATT
JMSF033E02+           CTTTGTGATAAAGCCCATAGTTGCGATGCAACGTCCGAGAGTAAGCAAGGGAAAGCGATT
JMSF046G03+           CTTTGTGATAAAGCCCATAGTTGCGATGCAACGTCCGAGAGTAAGCAAGGGAAAGCGATT
                      ____________________________________________________________
consensus             CTTTGTGATAAAGCCCATAGTTGCGATGCAACGTCCGAGAGTAAGCAAGGGAAAGCGATT
 
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JMSF043A17+           TCGAGCTCGCGTAAGCAATCGCAGGTCACGGACCGGGTTTGCCGGTCCACGCTGTGATTC
JMSF033E02+           TCGAGCTCGCGTAAGCAATCGCAGGTCACGGACCGGGTTTGCCGGTCCACGCTGTGATTC
JMSF046G03+           TCGAGCTCGCGTAAGCAATCGCAGGTCACGGACCGGGTTTGCCGGTCCACGCTGTGATTC
                      ____________________________________________________________
consensus             TCGAGCTCGCGTAAGCAATCGCAGGTCACGGACCGGGTTTGCCGGTCCACGCTGTGATTC
 
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JMSF043A17+           GGTCGGTTGATTATCGTCAACAGAAGCTCGATTAGGCCTTCGAAATGCGGCACGAGACCC
JMSF033E02+           GGTCGGTTGATTATCGTCAACAGAAGCTCGATTAGGCCTTCGAAATGCGGCACGAGACCC
JMSF046G03+           GGTCGGTTGATTATCGTCAACAGAAGCTCGATTAGGCCTTCGAAATGCGGCACGAGACCC
                      ____________________________________________________________
consensus             GGTCGGTTGATTATCGTCAACAGAAGCTCGATTAGGCCTTCGAAATGCGGCACGAGACCC
 
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JMSF043A17+           GAACTGATAGTATTTGATCCGCTATCACCATTGGCGTTCGTCGTAACGAAGATGGAGGTG
JMSF033E02+           GAACTGATAGTATTTGATCCGCTATCACCATTGGCGTTCGTCGTAACGAAGATGGAGGTG
JMSF046G03+           GAACTGATAGTATTTGATCCGCTATCACCATTGGCGTTCGTCGTAACGAAGATGGAGGTG
                      ____________________________________________________________
consensus             GAACTGATAGTATTTGATCCGCTATCACCATTGGCGTTCGTCGTAACGAAGATGGAGGTG
 
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JMSF043A17+           GTGGAGATGAGGAACTGTTCCTTGAGAGGGAAAGTGATCGAAACGCCGTCATTTGGGGAT
JMSF033E02+           GTGGAGATGAGGAACTGTTCCTTGAGAGGGAAAGTGATCGAAACGCCGTCATTTGGGGAT
JMSF046G03+           GTGGAGATGAGGAACTGTTCCTTGAGAGGGAAAGTGATCGAAACGCCGTCATTTGGGGAT
                      ____________________________________________________________
consensus             GTGGAGATGAGGAACTGTTCCTTGAGAGGGAAAGTGATCGAAACGCCGTCATTTGGGGAT
 
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JMSF043A17+           TGAACAACGGAGCGGAGGGTGTCGATGAGTCGACTGAAGGAGGCGGAGGCGGAGGCTGCG
JMSF033E02+           TGAACAACGGAGCGGAGGGTGTCGATGAGTCGACTGAAGGAGGCGGAGGCGGAGGCTGCG
JMSF011M06+             AACAACGGAGCGGAGGGTGTCGATGAGTCGACTGAAGGAGGCGGAGGCGGAGGCTGCG
JMSF046G03+           TGAACAACGGAGCGGAGGGTGTCGATGAGTCGACTGAAGGAGGCGGAGGCGGAGGCTGCG
                      ____________________________________________________________
consensus             TGAACAACGGAGCGGAGGGTGTCGATGAGTCGACTGAAGGAGGCGGAGGCGGAGGCTGCG
 
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JMSF043A17+           GCGGATGGAATAACAGTGGAGGAGTGCT                                
JMSF033E02+           GCGGATGGAATAACAGTGGAGGAGTGCT                                
JMSF011M06+           GCGGATGGAATAACAGTGGAGGAGTGCTCCTCGAGGAAGATGAGGAGCTGGAGCTTGAGG
JMSF046G03+           GCGGATGGAATAACAGTGGAGGAGTGCTCCTCGAGGAAGATGAGGAGCTGGAGCTTGAGG
                      ____________________________________________________________
consensus             GCGGATGGAATAACAGTGGAGGAGTGCTCCTCGAGGAAGATGAGGAGCTGGAGCTTGAGG
 
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JMSF011M06+           TTGAGAGGGAGGTCTTTGCGGACGACGGAGGAGAGAGCGAGCTCAAAGAGGAGCGTGCCG
JMSF046G03+           TTGAGAGGGAGGTCTTTGCGGACGACGGAGGAGAGAGCGAGCTCAAAGAGGAGCGTGCCG
                      ____________________________________________________________
consensus             TTGAGAGGGAGGTCTTTGCGGACGACGGAGGAGAGAGCGAGCTCAAAGAGGAGCGTGCCG
 
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JMSF011M06+           GAGTAATGGGCGGCGGTCCAGCGAAACAGACGCGCGCCGCCGTGGTTATAGTCGTCGATT
JMSF046G03+           GAGTAATGGGCGGCGGTCCAGCGAAACAGACGCGCGCCGCCGTGGTTATAGTCGTCGATT
                      ____________________________________________________________
consensus             GAGTAATGGGCGGCGGTCCAGCGAAACAGACGCGCGCCGCCGTGGTTATAGTCGTCGATT
 
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JMSF011M06+           AGAGATTCCCATTCTTGAGGGCTTAACGGTTTCAGCTGACTGTGAGATGACATCGCCGAG
JMSF046G03+           AGAGATTCCCATTCTTGAGGGCTTAACGGTTTCAGCTGACTGTGAGATGACATCGCCGAG
                      ____________________________________________________________
consensus             AGAGATTCCCATTCTTGAGGGCTTAACGGTTTCAGCTGACTGTGAGATGACATCGCCGAG
 
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JMSF011M06+           TTGATTCAGTTCCTATACGCAATTCGCCGATCAAGGCCCGGTCACAAGGTGCCTGTCTCT
JMSF046G03+           TTGATTCAGTTCCTATACGCAATTCGCCGATCAAGGCCCGGTCACAAGGTGCCTGTCTCT
                      ____________________________________________________________
consensus             TTGATTCAGTTCCTATACGCAATTCGCCGATCAAGGCCCGGTCACAAGGTGCCTGTCTCT
 
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JMSF011M06+           GCTCATTTTCAGCCCCGCCGGAAAACCAAAAAGGGGGAAATTCAACCCT           
JMSF046G03+           GCTCATTTTCAGCCCCGCCGGAAAACCAAAAAGGGGGAAATTCAACCCTGTTTTCTAACC
                      ____________________________________________________________
consensus             GCTCATTTTCAGCCCCGCCGGAAAACCAAAAAGGGGGAAATTCAACCCTGTTTTCTAACC