Contig 009534:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014G11Sequence483009534 (6)ref|XP_009608019.1|4e-17PREDICTED: calmodulin-like protein 3 [Nicotiana tomentosiformis]747009534 (6)ref|XP_006358302.1|7e-19PREDICTED: calmodulin-like protein 5-like [Solanum tuberosum]
JMFF015K04Sequence496009534 (6)ref|XP_009778097.1|2e-47PREDICTED: calmodulin-like protein 3 [Nicotiana sylvestris]677009534 (6)ref|XP_006358302.1|1e-20PREDICTED: calmodulin-like protein 5-like [Solanum tuberosum]
JMSF046E13Sequence741009534 (6)ref|XP_009608019.1|2e-43PREDICTED: calmodulin-like protein 3 [Nicotiana tomentosiformis]766009534 (6)ref|XP_006358302.1|6e-49PREDICTED: calmodulin-like protein 5-like [Solanum tuberosum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF015K04-                                              CTTTACTTGATGAAACGTAACCCT
rJMFF014G11-                                     ATGGCCTAACTTTACTTGATGAAACGTAACCCT
                      ____________________________________________________________
consensus                                        ATGGCCTAACTTTACTTGATGAAACGTAACCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF015K04-          TACAGAAAGTCACAACCTACATTTGCATCTCCAATCAACCAACAAAAAAAAAGAACATAA
rJMFF014G11-          TACAGAAAGTCACAACCTACATTTGCATCTCCAATCAACCAACAAAAAAAAAGAACATAA
                      ____________________________________________________________
consensus             TACAGAAAGTCACAACCTACATTTGCATCTCCAATCAACCAACAAAAAAAAAGAACATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF015K04-          TTTGATTCCAAACTTGTATTGCCCCTAAATAGGTGATCGAGAAAACACAACTAAAACAAA
rJMFF014G11-          TTTGATTCCAAACTTGTATTGCCCCTAAATAGGTGATCGAGAAAACACAACTAAAACAAA
rJMSF046E13-                                                     AACACAACTAAAACAAA
                      ____________________________________________________________
consensus             TTTGATTCCAAACTTGTATTGCCCCTAAATAGGTGATCGAGAAAACACAACTAAAACAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF015K04-          AATCTAATAAGCTAAACTAGATCCATTCTCAGGATCAAAACCAAGAATAAAAATATAACT
rJMFF014G11-          AATCTAATAAGCTAAACTAGATCCATTCTCAGGATCAAAACCAAGAATAAAAATATAACT
rJMSF046E13-          AATCTAATAAGCTAAACTAGATCCATTCTCAGGATCAAAACCAAGAATAAAAATATAACT
                      ____________________________________________________________
consensus             AATCTAATAAGCTAAACTAGATCCATTCTCAGGATCAAAACCAAGAATAAAAATATAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF015K04-          ACATAGTTGTTGATGCAAATATGTATGCTACCTGTACAGCCTAAGCAGAATTTCGTCTTT
rJMFF014G11-          ACATAGTTGTTGATGCAAATATGTATGCTACCTGTACAGCCTAAGCAGAATTTCGTCTTT
rJMSF046E13-          ACATAGTTGTTGATGCAAATATGTATGCTACCTGTACAGCCTAAGCAGAATTTCGTCTTT
                      ____________________________________________________________
consensus             ACATAGTTGTTGATGCAAATATGTATGCTACCTGTACAGCCTAAGCAGAATTTCGTCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF015K04-          CGTGGGCAAGTTTAAATGGAAATTAGCGTGATCTGATCTGATCAGAGATGGCAACAAAAC
rJMFF014G11-          CGTGGGCAAGTTTAAATGGAAATTAGCGTGATCTGATCTGATCAGAGATGGCAACAAAAC
rJMSF046E13-          CGTGGGCAAGTTTAAATGGAAATTAGCGTGATCTGATCTGATCAGAGATGGCAACAAAAC
                      ____________________________________________________________
consensus             CGTGGGCAAGTTTAAATGGAAATTAGCGTGATCTGATCTGATCAGAGATGGCAACAAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF015K04-          ATTACTTTTGGTGACTTTTGGTGTAATGTTTTTGAGTTAATACCAGGAAACGTATAAAGT
rJMFF014G11-          ATTACTTTTGGTGACTTTTGGTGTAATGTTTTTGAGTTAATACCAGGAAACGTATAAAGT
rJMSF046E13-          ATTACTTTTGGTGACTTTTGGTGTAATG-TTTTGAGTTAATACCAGGAAACGTATAAAGT
                      ____________________________________________________________
consensus             ATTACTTTTGGTGACTTTTGGTGTAATGTTTTTGAGTTAATACCAGGAAACGTATAAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF015K04-          AATATTAATGAAAAACTGAGGCCGGAGTCTTGGTTGGGCGACTTGCGATTTACCTCAAGA
rJMFF014G11-          AATATTAATGAAAAACTGAGGCCGGAGTCTTGGTTGGGCGACTTGCGATTTACCTTAAGA
rJMSF046E13-          AATATTAATGAAAAACTGAGGCCGGAGTCTTGGTTGGGCGACTTGCGATTTACCTTAAGA
                      ____________________________________________________________
consensus             AATATTAATGAAAAACTGAGGCCGGAGTCTTGGTTGGGCGACTTGCGATTTACCTTAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF015K04-          AACTGGAATGAGGCTTGGAGTAGAACCACCTCTCATCATCCTCTTGAACTCATCAAAGTT
rJMFF014G11-          AACTGGAATGAGGCTTGGAGTANAACCACCTCTCATCATCCTCTTGAACTCATCAAAGTT
rJMSF046E13-          AACTGGAATGAGGCTTGGAGTAGAACCACCTCTCATCATCCTCTTGAACTCATCAAAGTT
                      ____________________________________________________________
consensus             AACTGGAATGAGGCTTGGAGTAGAACCACCTCTCATCATCCTCTTGAACTCATCAAAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF015K04-          AACCATTCCATCTCCATCAACATCCACACTTCTAATCATCTCCTTGCAGGCCTCTAATCT
rJMFF014G11-          AACCATTCCATCTCCATCAACATCCACACTTCTAATCATCTCCTTGCAGGCCTCTAATCT
rJMSF046E13-          AACCATTCCATCTCCATCAACATCCACACTTCTAATCATCTCCTTGCAGGCCTCTAATCT
JMSF046E13+                                                 TCTCCTTGCAGGCCTCTAATCT
                      ____________________________________________________________
consensus             AACCATTCCATCTCCATCAACATCCACACTTCTAATCATCTCCTTGCAGGCCTCTAATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF015K04-          CTTCCCTTGGTTCAAGCCCAGAGATGAAAGAACCCCTGCTAAGCTCCTCTTCACTGATCA
rJMFF014G11-          CTTCCCTTGGTTCAAGCCCAGAGATGAAAGAA-CCCTGCTAAGCTCCTCTTCACTGATCA
rJMSF046E13-          CTTCCCTTGGTTCAAGCCCAGAGATGAAAGAA-CCCTGCTAAGCTCCTCTTCACTGATCA
JMFF015K04+                                                     GCTCCTCTTCACTGATCA
JMSF046E13+           CTTCCCTTGGTTCAAGCCCAGAGATGAAAGAA-CCCTGCTAAGCTCCTCTTCACTGATCA
                      ____________________________________________________________
consensus             CTTCCCTTGGTTCAAGCCCAGAGATGAAAGAA-CCCTGCTAAGCTCCTCTTCACTGATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF015K04-          GCCCATCTTTGTCCCCATCAAACACATCAAACGCCTCTCTCANATCATCATCA       
rJMFF014G11-          GCCCATCTTTGTCCCCATCAAACACATCAAACGCCTCTCTCAGATCATCATCACCATATC
rJMSF046E13-          GCCCATCTTTGTCCCCATCAAACACATCAAACGCCTCTCTCAGATCATCATCACCATCTC
JMFF015K04+           GCCCATCTTTGTCCCCATCAAACACATCAAACGCCTCTCTCAGATCATCATCACCATCTC
JMSF046E13+           GCCCATCTTTGTCCCCATCAAACACATCAAACGCCTCTCTCAGATCATCATCACCATCTC
                      ____________________________________________________________
consensus             GCCCATCTTTGTCCCCATCAAACACATCAAACGCCTCTCTCAGATCATCATCACCATCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF014G11-          CGGCGGCGCCGCCGCCGCCAGCCGCCATTTCCACGCCCAAGAAGGAGTTGCAGAG     
rJMSF046E13-          CGGCGGCGCCGCCGCCGCCAGCCGCCATTTCCACGCCCAAGAAGGAGTTGCAGAGCTCGC
JMFF015K04+           CGGCGGCGCCGCCGCCGCCAGCCGCCATTTCCACGCCCAAGAAGGAGTTGCAGAGCTCGC
JMSF046E13+           CGGCGGCGCCGCCGCCGCCAGCCGCCATTTCCACGCCCAAGAAGGAGTTGCAGAGCTCGC
                      ____________________________________________________________
consensus             CGGCGGCGCCGCCGCCGCCAGCCGCCATTTCCACGCCCAAGAAGGAGTTGCAGAGCTCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF046E13-          AGAACTCGTCAAGATCCACCAGCCCATCATTGTTCTCGTCCACCTTCTCCACCATCTCCG
JMFF015K04+           AGAACTCGTCAAGATCCACCAGCCCATCATTGTTCTCGTCCACCTTCTCCACCATCTCCG
JMFF014G11+                                                                ATCTCCG
JMSF046E13+           AGAACTCGTCAAGATCCACCAGCCCATCATTGTTCTCGTCCACCTTCTCCACCATCTCCG
                      ____________________________________________________________
consensus             AGAACTCGTCAAGATCCACCAGCCCATCATTGTTCTCGTCCACCTTCTCCACCATCTCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF046E13-          CTATCTCGCCGTCCTCCATCACTATCCCAATGTTCCTCAGCGACTCCTTCAGCTCCTGCT
JMFF015K04+           CTATCTCGCCGTCCTCCATCACTATCCCAATGTTCCTCAGCGACTCCTTCAGCTCCTGCT
JMFF014G11+           CTATCTCGCCGTCCTCCATCACTATCCCAATGTTCCTCAGCGACTCCTTCAGCTCCTGCT
JMSF046E13+           CTATCTCGCCGTCCTCCATCACTATCCCAATGTTCCTCAGCGACTCCTTCAGCTCCTGCT
                      ____________________________________________________________
consensus             CTATCTCGCCGTCCTCCATCACTATCCCAATGTTCCTCAGCGACTCCTTCAGCTCCTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF046E13-          TCGTTATGAACCCATCGCTGTTCTTGTCGAA                             
JMFF015K04+           TCGTTATGAACCCATCGCTGTTCTTGTCGAAAGTCGCGAAAACGCCCTTCAATTCCACCT
JMFF014G11+           TCGTTATGAACCCATCGCTGTTCTTGTCGAAAGTCGCGAAAACGCCCTTCAATTCCACCT
JMSF046E13+           TCGTTATGAACCCATCGCTGTTCTTGTCGAAAGTCGCGAAAACGCCCTTCAATTCCACCT
                      ____________________________________________________________
consensus             TCGTTATGAACCCATCGCTGTTCTTGTCGAAAGTCGCGAAAACGCCCTTCAATTCCACCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015K04+           TGCTGCGATTATTGCTCCCAGTACTCCTAACCACCTTCTTCTCTTCCGCCATGGATTTCT
JMFF014G11+           TGCTGCGATTATTGCTCCCAGTACTCCTAACCACCTTCTTCTCTTCCGCCATGGATTTCT
JMSF046E13+           TGCTGCGATTATTGCTCCCAGTACTCCTAACCACCTTCTTCTCTTCCGCCATGGATTTCT
                      ____________________________________________________________
consensus             TGCTGCGATTATTGCTCCCAGTACTCCTAACCACCTTCTTCTCTTCCGCCATGGATTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015K04+           TGGGCGGTGGGGCTTTTGAAGACGCGGTTTTGGCAGAGATGGAGTGAAGCCATGAAAGGA
JMFF014G11+           TGGGCGGTGGGGCTTTTGAAGACGCGGTTTTGGCAGAGATGGAGTGAAGCCATGAAAGGA
JMSF046E13+           TGGGCGGTGGGGCTTTTGAAGACGCGGTTTTGGCAGAGATGGAGTGAAGCCATGAAAGGA
                      ____________________________________________________________
consensus             TGGGCGGTGGGGCTTTTGAAGACGCGGTTTTGGCAGAGATGGAGTGAAGCCATGAAAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015K04+           ACTTCTTGGTAGGGAAATTGAAGAAAGTGGCGATGAAACCAAGGGCGAAGAGAAGTGC  
JMFF014G11+           ACTTCTTGGTAGGGAAATTGAAGAAAGTGGCGATGAAACCAAGGGCGAAGAGAAGTGCCA
JMSF046E13+           ACTTCTTGGTAGGGAAATTGAAGAAAGTGGCGATGAAACCAAGGGCGAAGAGAAGTGCCA
                      ____________________________________________________________
consensus             ACTTCTTGGTAGGGAAATTGAAGAAAGTGGCGATGAAACCAAGGGCGAAGAGAAGTGCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF014G11+           ACAACACTGTGCTCATCAACATCTTTAATGGAACAGAAAGAGCAAAACAGAAGAACACAG
JMSF046E13+           ACAACACTGTGCTCATCAACATCTTTAATGGAACAGAAAGAGCAAAACAGAAGAACACAG
                      ____________________________________________________________
consensus             ACAACACTGTGCTCATCAACATCTTTAATGGAACAGAAAGAGCAAAACAGAAGAACACAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF014G11+           TGGGGGCTGAGGAAATTGCTGGGAATCTGGGAATGGAAGATAGATAAA-CGCGTTGTTTG
JMSF046E13+           TGGGGGCTGAGGAAATTGCTGGGAATCTGGGAATGGAAGATAGATAAANCGCGTTGTTTG
                      ____________________________________________________________
consensus             TGGGGGCTGAGGAAATTGCTGGGAATCTGGGAATGGAAGATAGATAAANCGCGTTGTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF014G11+           ATGGATATTGGTGGTTGGGTGGGTGAGTTGAATGTTAATGGCGCAAAACCGCGTGGA   
JMSF046E13+           ATGGATATTGGTGGTTGGGTGGGTGAGTTGAATGTTAATGGCGCAAAACCGCGTGGAATC
                      ____________________________________________________________
consensus             ATGGATATTGGTGGTTGGGTGGGTGAGTTGAATGTTAATGGCGCAAAACCGCGTGGAATC