Contig 009533:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF046D21Sequence792009533 (4)ref|XP_011070022.1|7e-81PREDICTED: membrane steroid-binding protein 2-like [Sesamum indicum]723009533 (4)ref|XP_011070022.1|2e-58PREDICTED: membrane steroid-binding protein 2-like [Sesamum indicum]
JMSF046D22Sequence768009533 (4)ref|XP_011070022.1|5e-81PREDICTED: membrane steroid-binding protein 2-like [Sesamum indicum]719009533 (4)ref|XP_011070022.1|6e-57PREDICTED: membrane steroid-binding protein 2-like [Sesamum indicum]

Alignment

This contig is upended


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rJMSF046D22-                                            ATGACTAGGTAGTAGGGAATGAATAC
rJMSF046D21-                                            ATGACTAGGTAGTAGGGAATGAATAC
                      ____________________________________________________________
consensus                                               ATGACTAGGTAGTAGGGAATGAATAC
 
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rJMSF046D22-          ACAGTCCACAATGGCAGTTCAGAAGAACTATTAACAAATTGTTTGTTCTGCTTTGTAGCT
rJMSF046D21-          ACAG-CCACAATGGCAGTTCAGAAGAACTATTAACAAATTGTTTGTTCTGCTTTGTAGCT
JMSF046D21+                                                           TGCTTTGTAGCT
                      ____________________________________________________________
consensus             ACAGTCCACAATGGCAGTTCAGAAGAACTATTAACAAATTGTTTGTTCTGCTTTGTAGCT
 
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rJMSF046D22-          TATAACCTCAACTAATCAACAATAACTCCATTAACTACATCTCTGATCTTTATGTATACA
rJMSF046D21-          TATAACCTCAACTAATCAACAATAACTCCATTAACTACATCTCTGATCTTTATGTATACA
JMSF046D22+                       TAATCAACAATAACTCCATTAANTACATCTNTGATCTTTATGTATACA
JMSF046D21+           TATAACCTCAANTAATCAACAATAACTCCATTAACTACATCTNTGATCTTTATGTATACA
                      ____________________________________________________________
consensus             TATAACCTCAACTAATCAACAATAACTCCATTAACTACATCTCTGATCTTTATGTATACA
 
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rJMSF046D22-          TTTCCTTCTACCAAGCCATACCAAGTGGACGACAGGGAACCACATCTTGATCACTGAGTT
rJMSF046D21-          TTTCCTTCTACCAAGCCATACCAAGTGGACGACAGGGAACCACATCTTGATCACTGAGTT
JMSF046D22+           TTTCCTTCTACCAAGCCATACCAAGTGGACGACAGGGAACCACATCTTGATCACTGAGTT
JMSF046D21+           TTTCCTTNTACCAAGCCATACCAAGTGGACGACAGGGAACCACATCTTGATCACTGAGTT
                      ____________________________________________________________
consensus             TTTCCTTCTACCAAGCCATACCAAGTGGACGACAGGGAACCACATCTTGATCACTGAGTT
 
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rJMSF046D22-          TCTGGTTGTGCTTCATCATCTTCATTGCTGTTTTTACTTCCCTGGAGTTTATCGTGTTCA
rJMSF046D21-          TCTGGTTGTGCTTCATCATCTTCATTGCTGTTTTTACTTCCCTGGAGTTTATCGTGTTCA
JMSF046D22+           TCTGGTTGTGCTTCATCATCTTCATTGCTGTTTTTACTTCCCTGGAGTTTATCGTGTTCA
JMSF046D21+           TCTGGTTGTGCTTCATCATCTTCATTGCTGTTTTTACTTCCCTGGAGTTTATCGTGTTCA
                      ____________________________________________________________
consensus             TCTGGTTGTGCTTCATCATCTTCATTGCTGTTTTTACTTCCCTGGAGTTTATCGTGTTCA
 
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rJMSF046D22-          TGGTTTTCGTCATTTATACTTCTTCCCACTACCTTGTTGCCAGTTTCTTTACCCTCGAGC
rJMSF046D21-          TGGTTTTCGTCATTTATACTTCTTCCCACTACCTTGTTGCCAGTTTCTTTACCCTCGAGC
JMSF046D22+           TGGTTTTCGTCATTTATACTTCTTCCCACTACCTTGTTGCCAGTTTCTTTACCCTCGAGC
JMSF046D21+           TGGTTTTCGTCATTTATACTTCTTCCCACTACCTTGTTGCCAGTTTCTTTACCCTCGAGC
                      ____________________________________________________________
consensus             TGGTTTTCGTCATTTATACTTCTTCCCACTACCTTGTTGCCAGTTTCTTTACCCTCGAGC
 
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rJMSF046D22-          AACTCACCGACCATCTTCTTTGGAACAAGCTGCCCCACCTTAGCATACTTCTCCATGAAT
rJMSF046D21-          AACTCACCGACCATCTTCTTTGGAACAAGCTGCCCCACCTTAGCATACTTCTCCATGAAT
JMSF046D22+           AACTCACCGACCATCTTCTTTGGAACAAGCTGCCCCACCTTAGCATACTTCTCCATGAAT
JMSF046D21+           AACTCACCGACCATCTTCTTTGGAACAAGCTGCCCCACCTTAGCATACTTCTCCATGAAT
                      ____________________________________________________________
consensus             AACTCACCGACCATCTTCTTTGGAACAAGCTGCCCCACCTTAGCATACTTCTCCATGAAT
 
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rJMSF046D22-          TTATACTCCCAGTCTAGCAGAATTTCAAGCTCATCATCACTTAGGCCTTCAAGGTTCCCA
rJMSF046D21-          TTATACTCCCAGTCTAGCAGAATTTCAAGCTCATCATCACTTAGGCCTTCAAGGTTCCCA
JMSF046D22+           TTATACTCCCAGTCTAGCAGAATTTCAAGCTCATCATCACTTAGGCCTTCAAGGTTCCCA
JMSF046D21+           TTATACTCCCAGTCTAGCAGAATTTCAAGCTCATCATCACTTAGGCCTTCAAGGTTCCCA
                      ____________________________________________________________
consensus             TTATACTCCCAGTCTAGCAGAATTTCAAGCTCATCATCACTTAGGCCTTCAAGGTTCCCA
 
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rJMSF046D22-          TTAATCTCTCTAGGGTCAAATGACAGTTGAGCTAAGGCTCTGCTTGCATCCTTCCCAGTA
rJMSF046D21-          TTAATCTCTCTAGGGTCAAATGACAGTTGAGCTAAGGCTCTGCTTGCATCCTTCCCAGTA
JMSF046D22+           TTAATCTCTCTAGGGTCAAATGACAGTTGAGCTAAGGCTCTGCTTGCATCCTTCCCAGTA
JMSF046D21+           TTAATCTCTCTAGGGTCAAATGACAGTTGAGCTAAGGCTCTGCTTGCATCCTTCCCAGTA
                      ____________________________________________________________
consensus             TTAATCTCTCTAGGGTCAAATGACAGTTGAGCTAAGGCTCTGCTTGCATCCTTCCCAGTA
 
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rJMSF046D22-          AACATTGCATAAGGCCCACCAGGACCATAGAACATCCTGGAGCTAGAGACATCGTAGATT
rJMSF046D21-          AACATTGCATAAGGCCCACCAGGACCATAGAACATCCTGGAGCTAGAGACATCGTAGATT
JMSF046D22+           AACATTGCATAAGGCCCACCAGGACCATAGAACATCCTGGAGCTAGAGACATCGTAGATT
JMSF046D21+           AACATTGCATAAGGCCCACCAGGACCATAGAACATCCTGGAGCTAGAGACATCGTAGATT
                      ____________________________________________________________
consensus             AACATTGCATAAGGCCCACCAGGACCATAGAACATCCTGGAGCTAGAGACATCGTAGATT
 
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rJMSF046D22-          TGTCGTTTGATAGCCATGAGCAAGGGCTTTTTAGGATCGGAGCCATTGTAAGCTAAAAGC
rJMSF046D21-          TGTCGTTTGATAGCCATGAGCAAGGGCTTTTTAGGATCGGAGCCATTGTAAGCTAAAAGC
JMSF046D22+           TGTCGTTTGATAGCCATGAGCAAGGGCTTTTTAGGATCGGAGCCATTGTAAGCTAAAAGC
JMSF046D21+           TGTCGTTTGATAGCCATGAGCAAGGGCTTTTTAGGATCGGAGCCATTGTAAGCTAAAAGC
                      ____________________________________________________________
consensus             TGTCGTTTGATAGCCATGAGCAAGGGCTTTTTAGGATCGGAGCCATTGTAAGCTAAAAGC
 
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rJMSF046D22-          TCCTCTTCGGTCATATCGCCCATATGTAAGGGCTGCTGGCGGCTGGCGGCCTCCTCGGCC
rJMSF046D21-          TCCTCTTCGGTCATATCGCCCATATGTAAGGGCTGCTGGCGGCTGGCGGCCTCCTCGGCC
JMSF046D22+           TCCTCTTCGGTCATATCGCCCATATGTAAGGGCTGCTGGCGGCTGGCGGCCTCCTCGGCC
JMSF046D21+           TCCTCTTCGGTCATATCGCCCATATGTAAGGGCTGCTGGCGGCTGGCGGCCTCCTCGGCC
                      ____________________________________________________________
consensus             TCCTCTTCGGTCATATCGCCCATATGTAAGGGCTGCTGGCGGCTGGCGGCCTCCTCGGCC
 
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rJMSF046D22-          TTCTTCACATACATGTCGTCATCGTCGGCGCCG                           
rJMSF046D21-          TTCTTCACATACATGTCGTCATCGTCGGCGCCG                           
JMSF046D22+           TTCTTCACATACATGTCGTCATCGTCGGCGCCGAACATCCCGCAAACCACCTTGTAAGTC
JMSF046D21+           TTCTTCACATACATGTCGTCATCGTCGGCGCCGAACATCCCGCAAACCACCTTGTAAGTC
                      ____________________________________________________________
consensus             TTCTTCACATACATGTCGTCATCGTCGGCGCCGAACATCCCGCAAACCACCTTGTAAGTC
 
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JMSF046D22+           ACCACCATCATGGCCGCAATGGTAAAGAACGCCGTCGGCGACAGGCCAGTGTACTGGAAG
JMSF046D21+           ACCACCATCATGGCCGCAATGGTAAAGAACGCCGTCGGCGACAGGCCAGTGTACTGGAAG
                      ____________________________________________________________
consensus             ACCACCATCATGGCCGCAATGGTAAAGAACGCCGTCGGCGACAGGCCAGTGTACTGGAAG
 
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JMSF046D22+           ATAGCTTCCGTGAGCTGCGTCCATAGATTCAGGGCCATTTTTCCCCTCAAGCTCAAGCTC
JMSF046D21+           ATAGCTTCCGTGAGCTGCGTCCATAGATTCAGGGCCATTTTTCCCCTCAAGCTCAAGCTC
                      ____________________________________________________________
consensus             ATAGCTTCCGTGAGCTGCGTCCATAGATTCAGGGCCATTTTTCCCCTCAAGCTCAAGCTC