| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF048G21 | Sequence | 547 | 009531 (7) | ref|XP_009631478.1| | 2e-84 | PREDICTED: root phototropism protein 3-like [Nicotiana tomentosiformis] | 559 | 013842 (7) | ref|XP_009631478.1| | 6e-39 | PREDICTED: root phototropism protein 3-like [Nicotiana tomentosiformis] |
| JMSF006F09 | Sequence | 466 | 009531 (7) | ref|XP_009803877.1| | 1e-64 | PREDICTED: root phototropism protein 3-like [Nicotiana sylvestris] ref|XP_009803 | 390 | 024465 | gb|EYU38254.1| | 2e-05 | hypothetical protein MIMGU_mgv1a016328mg [Erythranthe guttata] |
| JMSF010E01 | Sequence | 394 | 009531 (7) | ref|XP_009631478.1| | 4e-41 | PREDICTED: root phototropism protein 3-like [Nicotiana tomentosiformis] | 704 | 013842 (7) | ref|XP_009631478.1| | 1e-108 | PREDICTED: root phototropism protein 3-like [Nicotiana tomentosiformis] |
| JMSF020J06 | Sequence | 664 | 009531 (7) | ref|XP_009631478.1| | 2e-113 | PREDICTED: root phototropism protein 3-like [Nicotiana tomentosiformis] | 701 | 013842 (7) | ref|XP_009631478.1| | 3e-106 | PREDICTED: root phototropism protein 3-like [Nicotiana tomentosiformis] |
| JMSF022M24 | Sequence | 634 | 009531 (7) | ref|XP_009631478.1| | 3e-107 | PREDICTED: root phototropism protein 3-like [Nicotiana tomentosiformis] | 722 | 013842 (7) | ref|XP_009631478.1| | 2e-131 | PREDICTED: root phototropism protein 3-like [Nicotiana tomentosiformis] |
| JMSF040H14 | Sequence | 660 | 009531 (7) | ref|XP_009631478.1| | 2e-94 | PREDICTED: root phototropism protein 3-like [Nicotiana tomentosiformis] | 770 | 013842 (7) | ref|XP_009631478.1| | 1e-125 | PREDICTED: root phototropism protein 3-like [Nicotiana tomentosiformis] |
| JMSF046C04 | Sequence | 777 | 009531 (7) | ref|XP_009631478.1| | 2e-106 | PREDICTED: root phototropism protein 3-like [Nicotiana tomentosiformis] | 745 | 013842 (7) | ref|XP_009803877.1| | 9e-130 | PREDICTED: root phototropism protein 3-like [Nicotiana sylvestris] ref|XP_009803 |
This contig is upended
. : . : . : . : . : . :
JMSF020J06+ CACTGCACNTCCTCACAATCTGGA
____________________________________________________________
consensus CACTGCACNTCCTCACAATCTGGA
. : . : . : . : . : . :
JMSF022M24+ CTCCGCCCATGGGGATAGCTTTTCGCAGCTTTTTAGCACCACTATGGAGTCCCTCC
JMSF020J06+ GATTCTCCGCCCATGGGGATAGCTTTTCGCAGCTTTTTAGCACCACTATGGAGTCCCTCC
JMSF040H14+ TCC
JMSF046C04+ CTCCGCCCATGGGGATAGCTTTTCGCAGCTTTTTAGCACCACTATGGAGTCCCTCC
____________________________________________________________
consensus GATTCTCCGCCCATGGGGATAGCTTTTCGCAGCTTTTTAGCACCACTATGGAGTCCCTCC
. : . : . : . : . : . :
JMFF048G21+ TTCAGTCTGGAATATCAGGTGGCCTTCTT
JMSF022M24+ ATGATGACAAGACTACATAGCTGAGAAAAGCTTCAGTCTTGAATATCAGGTTGCCTTCTT
JMSF020J06+ ATGATGACAAGACTACATAGCTGAGAAAAGCTTCAGTCTTGAATATCAGGTTGCCTTCTT
JMSF040H14+ ATGATGACAAGACTACATAGCTGAGAAAAGCTTCAGTCTTGAATATCAGGTTGCCTTCTT
JMSF046C04+ ATGATGACAAGACTACATAGCTGAGAAAAGCTTCAGTCTTGAATATCAGGTTGCCTTCTT
____________________________________________________________
consensus ATGATGACAAGACTACATAGCTGAGAAAAGCTTCAGTCTTGAATATCAGGTTGCCTTCTT
. : . : . : . : . : . :
JMFF048G21+ CCAAATCCTCTGTCATTTCAAGATACTCCGCTGCACATCTTAAGCCGGATATATTAGTCG
JMSF022M24+ CCAAATCCTCTGTCATTTCAAGATACTCCGCTGCACATCTTAAGCCGGATATATTAGTCG
JMSF006F09+ TTAGTCG
JMSF020J06+ CCAAATCCTCTGTCATTTCAAGATACTCCGCTGCACATCTTAAGCCGGATATATTAGTCG
JMSF040H14+ CCAAATCCTCTGTCATTTCAAGATACTCCGCTGCACATCTTAAGCCGGATATATTAGTCG
JMSF046C04+ CCAAATCCTCTGTCATTTCAAGATACTCCGCTGCACATCTTAAGCCGGATATATTAGTCG
____________________________________________________________
consensus CCAAATCCTCTGTCATTTCAAGATACTCCGCTGCACATCTTAAGCCGGATATATTAGTCG
. : . : . : . : . : . :
JMFF048G21+ CTGTTAGATCAACAGCGATTCCATAGCAGAACTTTGCAGCTAGCTCAAAGGCCTCAGGCC
JMSF022M24+ CTGTTAGATCAACAGCGATTCCATAGCAGAACTTTGCAGCTAGCTCAAAGGCCTCAGGCC
JMSF006F09+ CTGTTAGATCAACAGCGATTCCATAGCAGAACTTTGCAGCTAGCTCAAAGGCNTCAGGCC
JMSF020J06+ CTGTTAGATCAACAGCGATTCCATAGCAGAACTTTGCAGCTAGCTCAAAGGCCTCAGGCC
JMSF040H14+ CTGTTAGATCAACAGCGATTCCATAGCAGAACTTTGCAGCTAGCTCAAAGGCCTCAGGCC
JMSF046C04+ CTGTTAGATCAACAGCGATTCCATAGCAGAACTTTGCAGCTAGCTCAAAGGCCTCAGGCC
____________________________________________________________
consensus CTGTTAGATCAACAGCGATTCCATAGCAGAACTTTGCAGCTAGCTCAAAGGCCTCAGGCC
. : . : . : . : . : . :
JMFF048G21+ CCCCAGGAAGATCATCTAGGACTATCTTGCTCAAATCTGCTTCCCTCGATTCGTATATAA
JMSF022M24+ CCCCAGGAAGATCATCTAGGACTATCTTGCTCAAATCTGCTTCCCTCGATTCGTATATAA
JMSF006F09+ CCCCAGGAAGATCATCTAGGACTATCTTGCTCAAATCTGCTTCCCTCGATTCGTATATAA
JMSF020J06+ CCCCAGGAAGATCATCTAGGACTATCTTGCTCAAATCTGCTTCCCTCGATTCGTATATAA
JMSF010E01+ TTCCCTCGATTCGTATATAA
JMSF040H14+ CCCCAGGAAGATCATCTAGGACTATCTTGCTCAAATCTGCTTCCCTCGATTCGTATATAA
JMSF046C04+ CCCCAGGAAGATCATCTAGGACTATCTTGCTCAAATCTGCTTCCCTCGATTCGTATATAA
____________________________________________________________
consensus CCCCAGGAAGATCATCTAGGACTATCTTGCTCAAATCTGCTTCCCTCGATTCGTATATAA
. : . : . : . : . : . :
JMFF048G21+ CTCTGTTCATCTTTCCACTCCTCGAAAGCAGTGGATACTTGTGTAAATGGAAATTAGCAT
JMSF022M24+ CTCTGTTCATCTTTCCACTCCTCGAAAGCAGTGGATACTTGTGTAAATGGAAATTAGCAT
JMSF006F09+ CTCTGTTCATCTTTCCACTCCTCGAAAGCAGTGGATACTTGTGTAAATGGAAATTAGCAT
JMSF020J06+ CTCTGTTCATCTTTCCACTCCTCGAAAGCAGTGGATACTTGTGTAAATGGAAATTAGCAT
JMSF010E01+ CTCTGTTCATCTTTCCACTCCTCGAAAGCAGTGGATACTTGTGTAAATGGAAATTAGCAT
JMSF040H14+ CTCTGTTCATCTTTCCACTCCTCGAAAGCAGTGGATACTTGTGTAAATGGAAATTAGCAT
JMSF046C04+ CTCTGTTCATCTTTCCACTCCTCGAAAGCAGTGGATACTTGTGTAAATGGAAATTAGCAT
____________________________________________________________
consensus CTCTGTTCATCTTTCCACTCCTCGAAAGCAGTGGATACTTGTGTAAATGGAAATTAGCAT
. : . : . : . : . : . :
JMFF048G21+ CTCCAATTTGGACCAACAAGTCACTTGGGATATCAGTTGCAACATACCAAGATTGACCTC
JMSF022M24+ CTCCAATTTGGACCAACAAGTCACTTGGGATATCAGTTGCAACATACCAAGATTGACCTC
JMSF006F09+ CTCCAATTTGGACCAACAAGTCACTTGGGATATCAGTTGCAACATACCAAGATTGACCTC
JMSF020J06+ CTCCAATTTGGACCAACAAGTCACTTGGGATATCAGTTGCAACATACCAAGATTGACCTC
JMSF010E01+ CTCCAATTTGGACCAACAAGTCACTTGGGATATCAGTTGCAACATACCAAGATTGACCTC
JMSF040H14+ CTCCAATTTGGACCAACAAGTCACTTGGGATATCAGTTGCAACATACCAAGATTGACCTC
JMSF046C04+ CTCCAATTTGGACCAACAAGTCACTTGGGATATCAGTTGCAACATACCAAGATTGACCTC
____________________________________________________________
consensus CTCCAATTTGGACCAACAAGTCACTTGGGATATCAGTTGCAACATACCAAGATTGACCTC
. : . : . : . : . : . :
JMFF048G21+ TTTGCTCAAAACCATCAGTCTTGACACCGGGCTTGGTTGCAGTGACGACTCCATTGCCAT
JMSF022M24+ TTTGCTCAAAACCATCAGTCTTGACACCGGGCTTGGTTGCAGTGACGACTCCATTGCCAT
JMSF006F09+ TTTGCTCAAAACCATCAGTCTTGACACCGGGCTTGGTTGCAGTGACGACTCCATTGCCAT
JMSF020J06+ TTTGCTCAAAACCATCAGTCTTGACACCGGGCTTGGTTGCAGTGACGACTCCATTGCCAT
JMSF010E01+ TTTGCTCAAAACCATCAGTCTTGACACCGGGCTTGGTTGCAGTGACGACTCCATTGCCAT
JMSF040H14+ TTTGCTCAAAACCATCAGTCTTGACACCGGGCTTGGTTGCAGTGACGACTCCATTGCCAT
JMSF046C04+ TTTGCTCAAAACCATCAGTCTTGACACCGGGCTTGGTTGCAGTGACGACTCCATTGCCAT
____________________________________________________________
consensus TTTGCTCAAAACCATCAGTCTTGACACCGGGCTTGGTTGCAGTGACGACTCCATTGCCAT
. : . : . : . : . : . :
JMFF048G21+ AGTCTCGGCCACTGACAGACTCACTCTCTGACTCCCACACGGCGAGAAACACGAAAAAAG
JMSF022M24+ AGTCTCGGCCACTGACAGACTCACTCTCTGACTCCCACATGGCGAGAAACACGAAAAAAG
JMSF006F09+ AGTCTCGGCCACTGACAGACTCACTCTCTGACTCCCACATGGCGAGAAACACGAAAAAAG
JMSF020J06+ AGTCTCGGCCACTGACAGACTCACTCTCTGACTCCCACATGGCGAGAAACACGAAAAAAG
JMSF010E01+ AGTCTCGGCCACTGACAGACTCACTCTCTGACTCCCACATGGCGAGAAACACGAAAAAAG
JMSF040H14+ AGTCTCGGCCACTGACAGACTCACTCTCTGACTCCCACATGGCGAGAAACACGAAAAAAG
JMSF046C04+ AGTCTCGGCCACTGACAGACTCACTCTCTGACTCCCACATGGCGAGAAACACGAAAAAAG
____________________________________________________________
consensus AGTCTCGGCCACTGACAGACTCACTCTCTGACTCCCACATGGCGAGAAACACGAAAAAAG
. : . : . : . : . : . :
JMFF048G21+ TAGAGCAGAAATCTCCCAAGAAAGCGGGCACTATTTAGCTCATTCAGAGAGAAAGAACAC
JMSF022M24+ TAGAGCAGAAATCTCCCAAGAAAGCGGGCACTATTTAGCTCATTCAGAGAGAAAGAACAC
JMSF006F09+ TAGAGCAGAAATCTCCCAAGAAAGCGGGCACTATTTAGCTCATTCAGAGAGAAAGAACAC
JMSF020J06+ TAGAGCAGAAATCTCCCAAGAAAGCGGGCACTATTTAGCTCATTCAGAGAGAAAGAACAC
JMSF010E01+ TAGAGCAGAAATCTCCCAAGAAAGCGGGCACTATTTAGCTCATTCAGAGAGAAAGAACAC
JMSF040H14+ TAGAGCAGAAATCTCCCAAGAAAGCGGGCACTATTTAGCTCATTCAGAGAGAAAGAACAC
JMSF046C04+ TAGAGCAGAAATCTCCCAAGAAAGCGGGCACTATTTAGCTCATTCAGAGAGAAAGAACAC
____________________________________________________________
consensus TAGAGCAGAAATCTCCCAAGAAAGCGGGCACTATTTAGCTCATTCAGAGAGAAAGAACAC
. : . : . : . : . : . :
JMFF048G21+ AAGTTGAGATAAAGGGGAGCAGAAGAAGAAGCATA
JMSF022M24+ AAGTTGAGATAAAGGGGAGCAGAAGAAGAAGCATAGC
JMSF006F09+ AAGTTGAGATAAAGGGGAGCAGAAGAAGAAGCATAGC
JMSF020J06+ AAGTTGAGATAAAGGGGAGCAGAAGAAGAAGCATAGCT
JMSF010E01+ AAGTTGAGATAAAGGGGAGCAGAAGAAGAAGCATAGCTGAGAAGCAGGCAAGCAAGAGTG
JMSF040H14+ AAGTTGAGATAAAGGGGAGCAGAAGAAGAAGCATAGCTGAGAAGCAGGCAAGCAAGAGTG
JMSF046C04+ AAGTTGAGATAAAGGGGAGCAGAAGAAGAAGCATAGCTGAGAAGCAGGCAAGCAAGAGTG
____________________________________________________________
consensus AAGTTGAGATAAAGGGGAGCAGAAGAAGAAGCATAGCTGAGAAGCAGGCAAGCAAGAGTG
. : . : . : . : . : . :
JMSF010E01+ ATGAGTTAAAAAG
JMSF040H14+ ATGAGTTAAAAAGGAAGAATCCCACATGGGGATGCTTGCAATTATCTCTAAATGTC
JMSF046C04+ ATGAGTTAAAAAGGAAGAATCCCACATGGGGATGCTTGCAATTATCTCTAAATGTCGGCT
____________________________________________________________
consensus ATGAGTTAAAAAGGAAGAATCCCACATGGGGATGCTTGCAATTATCTCTAAATGTCGGCT
. : . : . : . : . : . :
JMSF046C04+ TCTCACTTGATTTTTGAGGCTTCTTACAGGCTGTGAAGTCATGGGCAGACACTCCAACGC
____________________________________________________________
consensus TCTCACTTGATTTTTGAGGCTTCTTACAGGCTGTGAAGTCATGGGCAGACACTCCAACGC