Contig 009530:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF046A06+                                                          TTGGAGTTGCAGA
                      ____________________________________________________________
consensus                                                            TTGGAGTTGCAGA
 
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JMSF029J03+                                     GAGCTAGCAGGAATGGGTGAGGCGGCAGATTCTG
JMSF046A06+           CGACCCGATGTTTGCACTCGAGGCAAGAGCTAGCAGGAATGGGTGAGGCGGCAGATTCTG
                      ____________________________________________________________
consensus             CGACCCGATGTTTGCACTCGAGGCAAGAGCTAGCAGGAATGGGTGAGGCGGCAGATTCTG
 
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JMSF029J03+           TTGCCTCGCGATTTTCAGCACAAACTCTGTCAGCACCACACAAGACGTGTCGTTGGTGAA
JMSF046A06+           TTGCCTCGCGATTTTCAGCACAAACTCTGTCAGCACCACACAAGACGTGTCGTTGGTGAA
                      ____________________________________________________________
consensus             TTGCCTCGCGATTTTCAGCACAAACTCTGTCAGCACCACACAAGACGTGTCGTTGGTGAA
 
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JMSF029J03+           TAGCGCACTGGAAATGGCAGAAATCAAGCAGATTCTGAACAGCAAATCCTTGGCTCCCTT
JMSF046A06+           TAGCGCACTGGAAATGGCAGAAATCAAGCAGATTCTGAACAGCAAATCCTTGGCTCCCTT
                      ____________________________________________________________
consensus             TAGCGCACTGGAAATGGCAGAAATCAAGCAGATTCTGAACAGCAAATCCTTGGCTCCCTT
 
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JMSF029J03+           GCTCTTCCAGGCCAGCAATTTCCCCAGATACTTAAACATGTCTGCTCTTTCAAGATACAC
JMSF046A06+           GCTCTTCCAGGCCAGCAATTTCCCCAGATACTTAAACATGTCTGCTCTTTCAAGATACAC
                      ____________________________________________________________
consensus             GCTCTTCCAGGCCAGCAATTTCCCCAGATACTTAAACATGTCTGCTCTTTCAAGATACAC
 
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JMSF029J03+           ACTCACAACCATTGTCCCAAACAGAAGCCCCAGAATATGAAGATCAATTGCAGCATAGGC
JMSF046A06+           ACTCACAACCATTGTCCCAAACAGAAGCCCCAGAATATGAAGATCAATTGCAGCATAGGC
                      ____________________________________________________________
consensus             ACTCACAACCATTGTCCCAAACAGAAGCCCCAGAATATGAAGATCAATTGCAGCATAGGC
 
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JMSF029J03+           TTGTTCGGGCGTCAAAACCCGAAAAAGAACCATAAGCATAGCCCCAAGAAGAGACCCTGC
JMSF046A06+           TTGTTCGGGCGTCAAAACCCGAAAAAGAACCATAAGCATAGCCCCAAGAAGAGACCCTGC
                      ____________________________________________________________
consensus             TTGTTCGGGCGTCAAAACCCGAAAAAGAACCATAAGCATAGCCCCAAGAAGAGACCCTGC
 
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JMSF029J03+           AGTCCTTCCAACCGGCATAAACGGAACAGCAGGAAAAACAGCCAACACCCAAAAGATTGC
JMFF038J09+                                                 CAGCCAACACCCAAAAGATTGC
JMSF046A06+           AGTCCTTCCAACCGGCATAAACGGAACAGCAGGAAAAACAGCCAACACCCAAAAGATTGC
                      ____________________________________________________________
consensus             AGTCCTTCCAACCGGCATAAACGGAACAGCAGGAAAAACAGCCAACACCCAAAAGATTGC
 
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JMSF029J03+           AAAGGCAATTGACCCAAGAACCACTTTCACAGGTGCGCCCATTGCCATTTTTCTCCCAAC
JMFF038J09+           AAAGGCAATTGACCCAAGAACCACTTTCACAGGTGCGCCCATTGCCATTTTTCTCCCAAC
JMSF046A06+           AAAGGCAATTGACCCAAGAACCACTTTCACAGGTGCGCCCATTGCCATTTTTCTCCCAAC
                      ____________________________________________________________
consensus             AAAGGCAATTGACCCAAGAACCACTTTCACAGGTGCGCCCATTGCCATTTTTCTCCCAAC
 
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JMSF029J03+           TCTTTTCCTCTACAACACTAATATTTCTCACTCCATCAAGAAAATCACTGTTTACACCTC
JMFF038J09+           TCTTTTCCTCTACAACACTAATATTTCTCACTCCATCAAGAAAATCACTGTTTACACCTC
JMSF046A06+           TCTTTTCCTCTACAACACTAATATTTCTCACTCCATCAAGAAAATCACTGTTTACACCTC
                      ____________________________________________________________
consensus             TCTTTTCCTCTACAACACTAATATTTCTCACTCCATCAAGAAAATCACTGTTTACACCTC
 
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JMSF029J03+           TGAAACTG                                                    
JMFF038J09+           TGAAACTGCAAAAAGATTGAATCTTTACTTGTTATTAGAACTATAATCAACAACTCCTAA
JMSF046A06+           TGAAACTGCAAAAAGATTGAATCTTTACTTGTTATTAGAACTATAATCAACAACTCCTAA
                      ____________________________________________________________
consensus             TGAAACTGCAAAAAGATTGAATCTTTACTTGTTATTAGAACTATAATCAACAACTCCTAA
 
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JMFF038J09+           ACTAGGGTTGGCTTTATCATGTGAAGAACACAACATTTGACCATTTGAATCTCGTGTCCT
JMSF046A06+           ACTAGGGTTGGCTTTATCATGTGAAGAACACAACATTTGACCATTTGAATCTCGTGTCCT
                      ____________________________________________________________
consensus             ACTAGGGTTGGCTTTATCATGTGAAGAACACAACATTTGACCATTTGAATCTCGTGTCCT
 
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JMFF038J09+           CTCTCTCTCACACACATAATTTTAATGGCTGAAGATGATGCCACGGCCTCATCTAACACA
JMSF046A06+           CTCTCTCTCACACACATAATTTTAATGGCTGAAGATGATGCCACGGCCTCATCTAACACA
                      ____________________________________________________________
consensus             CTCTCTCTCACACACATAATTTTAATGGCTGAAGATGATGCCACGGCCTCATCTAACACA
 
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JMFF038J09+           TGACAGCACAACCCAAACTCTTTCCAAAGAATAAATGGATCCAGACACCTC         
JMSF046A06+           TGACAGCACAACCCAAACTCTTTCCAAAGAATAAATGGATCCAGACACCTCAATGCCTCA
                      ____________________________________________________________
consensus             TGACAGCACAACCCAAACTCTTTCCAAAGAATAAATGGATCCAGACACCTCAATGCCTCA