Contig 009528:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF045M08+                                         TCAGACATGCAGATCAATTTAAAATCTTGT
                      ____________________________________________________________
consensus                                           TCAGACATGCAGATCAATTTAAAATCTTGT
 
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JMFS013A11+                                                           GATGCTGAAGTT
JMFS133D04+                                                           GATGCTGAAGTT
JMSF045M08+           TCAAGTAGCATGCAGAGCATCTCTAGGCAGGCCTTTCTAGATTTCTCTGATGCTGAAGTT
                      ____________________________________________________________
consensus             TCAAGTAGCATGCAGAGCATCTCTAGGCAGGCCTTTCTAGATTTCTCTGATGCTGAAGTT
 
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JMFS013A11+           ACAAAAGAAAGGGCACCAAGTAGAAGAACACCTTCAGAGTAGAAAACAGAGATTTTTTCA
JMFS133D04+           ACAAAAGAAAGGGCACCAAGTAGAAGAACACCTTCAGAGTAGAAAACAGAGATTTTTTCA
JMSF045M08+           ACAAAAGAAAGGGCACCAAGTAGAAGAACACCTTCAGAGTAGAAAACAGAGATTTTTTCA
                      ____________________________________________________________
consensus             ACAAAAGAAAGGGCACCAAGTAGAAGAACACCTTCAGAGTAGAAAACAGAGATTTTTTCA
 
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JMFS013A11+           GAATGCAAATGTACAGAGAAAAGGTTCAAGAGAACCTCAACAGCATAATCAACAACAAGA
JMFS133D04+           GAATGCAAATGTACAGAGAAAAGGTTCAAGAGAACCTCAACAGCATAATCAACAACAAGA
JMSF045M08+           GAATGCAAATGTACAGAGAAAAGGTTCAAGAGAACCTCAACAGCATAATCAACAACAAGA
                      ____________________________________________________________
consensus             GAATGCAAATGTACAGAGAAAAGGTTCAAGAGAACCTCAACAGCATAATCAACAACAAGA
 
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JMFS013A11+           GAAGAGGGTCTGGATGATTTCCTAATCCAGATATACAGAAGTTTCAGAAGTAAAGAATAA
JMFS133D04+           GAAGAGGGTCTGGATGATTTCCTAATCCAGATATACAGAAGTTTCAGAAGTAAAGAATAA
JMSF045M08+           GAAGAGGGTCTGGATGATTTCCTAATCCAGATATACAGAAGTTTCAGAAGTAAAGAATAA
                      ____________________________________________________________
consensus             GAAGAGGGTCTGGATGATTTCCTAATCCAGATATACAGAAGTTTCAGAAGTAAAGAATAA
 
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JMFS013A11+           GATTCCTGTGGGAGGGAGATTTTAGGTGAGGACATAAGAGAGAGTAGAAGTTTTGCTTGT
JMFS133D04+           GATTCCTGTGGGAGGGAGATTTTAGGTGAGGACATAAGAGAGAGTAGAAGTTTTGCTTGT
JMSF045M08+           GATTCCTGTGGGAGGGAGATTTTAGGTGAGGACATAAGAGAGAGTAGAAGTTTTGCTTGT
                      ____________________________________________________________
consensus             GATTCCTGTGGGAGGGAGATTTTAGGTGAGGACATAAGAGAGAGTAGAAGTTTTGCTTGT
 
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JMFS013A11+           GGATCAGCAATATACAGTGAGTTTTGAGAGGTAACAAGAGTATGCAAAGATTGGAGGTTA
JMFS133D04+           GGATCAGCAATATACAGTGAGTTTTGAGAGGTAACAAGAGTATGCAAAGATTGGAGGTTA
JMSF045M08+           GGATCAGCAATATACAGTGAGTTTTGAGAGGTAACAAGAGTATGCAAAGATTGGAGGTTA
                      ____________________________________________________________
consensus             GGATCAGCAATATACAGTGAGTTTTGAGAGGTAACAAGAGTATGCAAAGATTGGAGGTTA
 
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JMFS013A11+           TGAGAATTGAAGGCCTGTTGTTGAACTGAATCCCGCAAATCTGCCCATGCTTGTATTATG
JMFS133D04+           TGAGAATTGAAGGCCTGTTGTTGAACTGAATCCCGCAAATCTGCCCATGCTTGTATTATG
JMSF045M08+           TGAGAATTGAAGGCCTGTTGTTGAACTGAATCCCGCAAATCTGCCCATGCTTGTATTATG
                      ____________________________________________________________
consensus             TGAGAATTGAAGGCCTGTTGTTGAACTGAATCCCGCAAATCTGCCCATGCTTGTATTATG
 
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JMFS013A11+           GCTTGAGCAGATGTCAAAGATGGCTGTCTTGAGCTCACACTGCTGCTGCTCCCACCAATG
JMFS133D04+           GCTTGAGCAGATGTCAAAGATGGCTGTCTTGAGCTCACACTGCTGCTGCTCCCACCAATG
JMSF045M08+           GCTTGAGCAGATGTCAAAGATGGCTGTCTTGAGCTCACACTGCTGCTGCTCCCACCAATG
                      ____________________________________________________________
consensus             GCTTGAGCAGATGTCAAAGATGGCTGTCTTGAGCTCACACTGCTGCTGCTCCCACCAATG
 
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JMFS013A11+           ATGCTTTGCAGCCATACTTCAAGGAAAACTGTTTGAGATTGCTTAGCCATCTTGTGACTT
JMFS133D04+           ATGCTTTGCAGCCATACTTCAAGGAAAACTGTTTGAGATTGCTTAGCCATCTTGTGACTT
JMSF045M08+           ATGCTTTGCAGCCATACTTCAAGGAAAACTGTTTGAGATTGCTTAGCCATCTTGTGACTT
                      ____________________________________________________________
consensus             ATGCTTTGCAGCCATACTTCAAGGAAAACTGTTTGAGATTGCTTAGCCATCTTGTGACTT
 
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JMFS013A11+           CCACCTTACACGGCAGTACTGTCGATGCTGAGCTCCACAAAATTTCTCGCGGGGCAACAA
JMFS133D04+           CCACCTTACACGGCAGTACTGTCGATGCTGAGCTCCACAAAATTTCTCGCGGGGCAACAA
JMSF045M08+           CCACCTTACACGGCAGTACTGTCGATGCTGAGCTCCACAAAATTTCTCGCGGGGCAACAA
                      ____________________________________________________________
consensus             CCACCTTACACGGCAGTACTGTCGATGCTGAGCTCCACAAAATTTCTCGCGGGGCAACAA
 
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JMFS013A11+           GATTCTACTCTCTAACAAAGCAAGCCAAGTTCTGCAACTAAAGCAGT             
JMFS133D04+           GATTCTACTCTCTAACAAAGCAAGCCAAGTTCTGCAACTAAAGCAGTGGGAAACTTCGA 
JMSF045M08+           GATTCTACTCTCTAACAAAGCAAGCCAAGTTCTGCAACTAAAGCAGTGGGAAACTTCGAT
                      ____________________________________________________________
consensus             GATTCTACTCTCTAACAAAGCAAGCCAAGTTCTGCAACTAAAGCAGTGGGAAACTTCGAT
 
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JMSF045M08+           TTCTGTTTTTTTTTCTTCTCCCAGTTTATAATCTATTATCTATATATCAGTCTTTTAGTC
                      ____________________________________________________________
consensus             TTCTGTTTTTTTTTCTTCTCCCAGTTTATAATCTATTATCTATATATCAGTCTTTTAGTC