Contig 009524:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011E24Sequence374009524 (2)747004382 (2)ref|XP_006365693.1|7e-21PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum
JMSF045D02Sequence500009524 (2)839004382 (2)ref|XP_006365693.1|4e-21PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum

Alignment

This contig is upended


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JMSF045D02+                                                   CTCATGCCTGTAATTAAAAC
                      ____________________________________________________________
consensus                                                     CTCATGCCTGTAATTAAAAC
 
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JMSF045D02+           AACTTCTCTCTCCTTTGACCCTTTAATAAGCTGATTTATGATTGTTTCTGCTTCATTCTT
                      ____________________________________________________________
consensus             AACTTCTCTCTCCTTTGACCCTTTAATAAGCTGATTTATGATTGTTTCTGCTTCATTCTT
 
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JMSF045D02+           GAAACCCACGACTTTATCAGAGATGTTTGGCATCTTTCTAATCTCAAATGCGTTGTATTA
                      ____________________________________________________________
consensus             GAAACCCACGACTTTATCAGAGATGTTTGGCATCTTTCTAATCTCAAATGCGTTGTATTA
 
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JMSF045D02+           TGTCTTTGTAAATGCCCACAAACTTTAATCTCTAGATAAAAACACTTTGAGTTGATTGGA
                      ____________________________________________________________
consensus             TGTCTTTGTAAATGCCCACAAACTTTAATCTCTAGATAAAAACACTTTGAGTTGATTGGA
 
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JMSF011E24+                                                             GAAATGAATT
JMSF045D02+           AGAAGTAACTTGGCAAAGATTATAATTTGCTTCTGATCGGATCTGTAAGTGAAATGAATT
                      ____________________________________________________________
consensus             AGAAGTAACTTGGCAAAGATTATAATTTGCTTCTGATCGGATCTGTAAGTGAAATGAATT
 
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JMSF011E24+           TCAGAGCGACTATCCAATATCTTTAATCAGACTGCAGATTTGTTAAAGTAGAAAAAAGAG
JMSF045D02+           TCAGAGCGACTATCCAATATCTTTAATCAGACTGCAGATTTGTTAAAGTAGAAAAAAGAG
                      ____________________________________________________________
consensus             TCAGAGCGACTATCCAATATCTTTAATCAGACTGCAGATTTGTTAAAGTAGAAAAAAGAG
 
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JMSF011E24+           GAAGCTACGAAATAGAGATCAAAGAAGAGACAGCGCGCATTTGGTAGAAGAAGGAAGTTC
JMSF045D02+           GAAGCTACGAAATAGAGATCAAAGAAGAGACAGCGCGCATTTGGTAGAAGAAGGAAGTTC
                      ____________________________________________________________
consensus             GAAGCTACGAAATAGAGATCAAAGAAGAGACAGCGCGCATTTGGTAGAAGAAGGAAGTTC
 
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JMSF011E24+           TTTATATGAAAAGAGATAATTGAGTGAGAAAGGCTTATTTGATGAGAGATTGATTTTTGG
JMSF045D02+           TTTATATGAAAAGAGATAATTGAGTGAGAAAGGCTTATTTGATGAGAGATTGATTTTTGG
                      ____________________________________________________________
consensus             TTTATATGAAAAGAGATAATTGAGTGAGAAAGGCTTATTTGATGAGAGATTGATTTTTGG
 
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JMSF011E24+           TCTGTAATGGTTGAATCTTTGGGTGTAAGGCAACATGCTTTTAGCCCATGTGAAACCT  
JMSF045D02+           TCTGTAATGGTTGAATCTTTGGGTGTAAGGCAACATGCTTTTAGCCCATGTGAAACCTTC
                      ____________________________________________________________
consensus             TCTGTAATGGTTGAATCTTTGGGTGTAAGGCAACATGCTTTTAGCCCATGTGAAACCTTC