Contig 009523:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF042O18+                                                                TCAGTTC
                      ____________________________________________________________
consensus                                                                  TCAGTTC
 
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JMSF042O18+           TAAAATTGCCAACAAAATTTTTCCTTGTGGAAAAGTTTTGATGGGAATGGCCTTCAGAAA
JMSF045A12+                                                             CCTTCAGAAA
                      ____________________________________________________________
consensus             TAAAATTGCCAACAAAATTTTTCCTTGTGGAAAAGTTTTGATGGGAATGGCCTTCAGAAA
 
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JMSF042O18+           ATCCATTAACACCCATGGAACCAGGTGACACATCTGAATTTAGCTTCTCCTCAAAACTGT
JMSF045A12+           ATCCATTAACACCCATGGAACCAGGTGACACATCTGAATTTAGCTTCTCCTCAAAACTGT
                      ____________________________________________________________
consensus             ATCCATTAACACCCATGGAACCAGGTGACACATCTGAATTTAGCTTCTCCTCAAAACTGT
 
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JMSF042O18+           GATCAAAATTCGGACTTTTCCAACTTTCATTCAAATGGTACTCTATGCTTCCAAGCCCAT
JMSF045A12+           GATCAAAATTCGGACTTTTCCAACTTTCATTCAAATGGTACTCTATGCTTCCAAGCCCAT
                      ____________________________________________________________
consensus             GATCAAAATTCGGACTTTTCCAACTTTCATTCAAATGGTACTCTATGCTTCCAAGCCCAT
 
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JMSF042O18+           TAACTAAACTATCACCAATTGAAAAACTGCTAAAACAACAAAAGCCGTGGAGAACCCTTT
JMSF045A12+           TAACTAAACTATCACCAATTGAAAAACTGCTAAAACAACAAAAGCCGTGGAGAACCCTTT
                      ____________________________________________________________
consensus             TAACTAAACTATCACCAATTGAAAAACTGCTAAAACAACAAAAGCCGTGGAGAACCCTTT
 
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JMSF042O18+           GACCAAAAGAGGTGCAGAGTACATGAATTGATAGTTTGGGAAAATGGGGCATACCCTCTA
JMSF045A12+           GACCAAAAGAGGTGCAGAGTACATGAATTGATAGTTTGGGAAAATGGGGCATACCCTCTA
                      ____________________________________________________________
consensus             GACCAAAAGAGGTGCAGAGTACATGAATTGATAGTTTGGGAAAATGGGGCATACCCTCTA
 
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JMSF042O18+           TCTCAGTACTCTCCAATTATATCCAAGACTCGCGGTTTCCGGCATAGAAATACTCATCAA
JMSF045A12+           TCTCAGTACTCTCCAATTATATCCAAGACTCGCGGTTTCCGGCATAGAAATACTCATCAA
                      ____________________________________________________________
consensus             TCTCAGTACTCTCCAATTATATCCAAGACTCGCGGTTTCCGGCATAGAAATACTCATCAA
 
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JMSF042O18+           ACGGAAACCCCGAAAGAACAAGTAAGGATTCGAACAATGTAATGTATGCATTGAAAAAAT
JMSF045A12+           ACGGAAACCCCGAAAGAACAAGTAAGGATTCGAACAATGTAATGTATGCATTGAAAAAAT
                      ____________________________________________________________
consensus             ACGGAAACCCCGAAAGAACAAGTAAGGATTCGAACAATGTAATGTATGCATTGAAAAAAT
 
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JMSF042O18+           ACTCTATCTTTCTGGGTATTCGGATTCGATGAGATCCAAAGTGAAATGACTAGGGTTTTA
JMSF045A12+           ACTCTATCTTTCTGGGTATTCGGATTCGATGAGATCCAAAGTGAAATGACTAGGGTTTTA
                      ____________________________________________________________
consensus             ACTCTATCTTTCTGGGTATTCGGATTCGATGAGATCCAAAGTGAAATGACTAGGGTTTTA
 
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JMSF042O18+           GGGGTTTTTGGTTTTAATAAAGAGCAACGGATTACCTGGTGAAATCGGGCTTTGTATTGC
JMSF045A12+           GGGGTTTTTGGTTTTAATAAAGAGCAACGGATTACCTGGTGAAATCGGGCTTTGTATTGC
                      ____________________________________________________________
consensus             GGGGTTTTTGGTTTTAATAAAGAGCAACGGATTACCTGGTGAAATCGGGCTTTGTATTGC
 
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JMSF042O18+           GGGTCAATTTGTCGTCATTATCGAGTCATGAGATTCAGGTTCCTCAGTTCTGCTTAAAGA
JMSF045A12+           GGGTCAATTTGTCGTCATTATCGAGTCATGAGATTCAGGTTCCTCAGTTCTGCTTAAAGA
                      ____________________________________________________________
consensus             GGGTCAATTTGTCGTCATTATCGAGTCATGAGATTCAGGTTCCTCAGTTCTGCTTAAAGA
 
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JMSF042O18+           TTGAAGATGGCGAGGCTGGGACATACATATC                             
JMSF045A12+           TTGAAGATGGCGAGGCTGGGACATACATATCGCCATAGAGCAGAAAAGAAAAATTCTACC
                      ____________________________________________________________
consensus             TTGAAGATGGCGAGGCTGGGACATACATATCGCCATAGAGCAGAAAAGAAAAATTCTACC