| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF037J16 | Sequence | 357 | 009522 (7) | gb|ADF42513.2| | 2e-42 | gibberellin 2-oxidase 2 [Ipomoea nil] | 312 | 009522 (7) | gb|ADF42513.2| | 1e-42 | gibberellin 2-oxidase 2 [Ipomoea nil] |
| JMFF050K09 | Sequence | 347 | 009522 (7) | gb|ADF42513.2| | 2e-42 | gibberellin 2-oxidase 2 [Ipomoea nil] | 347 | 009522 (7) | gb|ADF42513.2| | 2e-42 | gibberellin 2-oxidase 2 [Ipomoea nil] |
| JMFS131G12 | Sequence | 615 | 009522 (7) | gb|ADF42513.2| | 1e-119 | gibberellin 2-oxidase 2 [Ipomoea nil] | |||||
| JMSF044P24 | Sequence | 694 | 009522 (7) | gb|ADF42513.2| | 2e-136 | gibberellin 2-oxidase 2 [Ipomoea nil] | 746 | 009522 (7) | gb|ADF42513.2| | 5e-137 | gibberellin 2-oxidase 2 [Ipomoea nil] |
This contig is upended
. : . : . : . : . : . :
rJMFF050K09- GGTTGAATCAAA
JMFF050K09+ GGTTGAATCAAA
JMFF037J16+ TTTTTTTTTTGGTTGAATCAAA
____________________________________________________________
consensus TTTTTTTTTTGGTTGAATCAAA
. : . : . : . : . : . :
rJMFF050K09- ATATTATCATTCAAAACCTAATGAAGAATCTAAGTTGACAACCACGTTTCCTAATAACAT
JMFF050K09+ ATATTATCATTCAAAACCTAATGAAGAATCTAAGTTGACAACCACGTTTCCTAATAACAT
rJMFF037J16- AAGAATCTAAGTTGACAACCACGTTTCCTAATAACAT
JMFF037J16+ ATATTATCATTCAAAACCTAATGAAGAATCTAAGTTGACAACCACGTTTCCTAATAACAT
rJMSF044P24- TTTCCTAATAACAT
____________________________________________________________
consensus ATATTATCATTCAAAACCTAATGAAGAATCTAAGTTGACAACCACGTTTCCTAATAACAT
. : . : . : . : . : . :
rJMFF050K09- AGTACACTAGATGATAAAGCAAGGAAAGAAAAGTACAAAACATCATGAAGCTGCAATCTT
JMFF050K09+ AGTACACTAGATGATAAAGCAAGGAAAGAAAAGTACAAAACATCATGAAGCTGCAATCTT
rJMFF037J16- AGTACACTAGATGATAAAGCAAGGAAAGAAAAGTACAAAACATCATGAAGCTGCAATCTT
JMFF037J16+ AGTACACTAGATGATAAAGCAAGGAAAGAAAAGTACAAAACATCATGAAGCTGCAATCTT
rJMSF044P24- AGTACACTAGATGATAAAGCAAGGAAAGAAAAGTACAAAACATCATGAAGCTGCAATCTT
____________________________________________________________
consensus AGTACACTAGATGATAAAGCAAGGAAAGAAAAGTACAAAACATCATGAAGCTGCAATCTT
. : . : . : . : . : . :
rJMFF050K09- CTCGAAGGGAACCAGCCTGTTTACAGCCAACCTAGAACTAAAAGCAGATTTTTTGAACTC
JMFF050K09+ CTCGAAGGGAACCAGCCTGTTTACAGCCAACCTAGAACTAAAAGCAGATTTTTTGAACTC
rJMFF037J16- CTCGAAGGGAACCAGCCTGTTTACAGCCAACCTAGAACTAAAAGCAGATTTTTTGAACTC
JMFF037J16+ CTCGAAGGGAACCAGCCTGTTTACAGCCAACCTAGAACTAAAAGCAGATTTTTTGAACTC
rJMSF044P24- CTCGAAGGGAACCAGCCTGTTTACAGCCAACCTAGAACTAAAAGCAGATTTTTTGAACTC
____________________________________________________________
consensus CTCGAAGGGAACCAGCCTGTTTACAGCCAACCTAGAACTAAAAGCAGATTTTTTGAACTC
. : . : . : . : . : . :
rJMFF050K09- GAACCATGTAAACTCTCTGTACAAGCTATCTTGTTCAGCTTCCATTAATGAAGGCAGGGG
JMFF050K09+ GAACCATGTAAACTCTCTGTACAAGCTATCTTGTTCAGCTTCCATTAATGAAGGCAGGGG
rJMFF037J16- GAACCATGTAAACTCTCTGTACAAGCTATCTTGTTCAGCTTCCATTAATGAAGGCAGGGG
JMFF037J16+ GAACCATGTAAACTCTCTGTACAAGCTATCTTGTTCAGCTTCCATTAATGAAGGCAGGGG
rJMSF044P24- GAACCATGTAAACTCTCTGTACAAGCTATCTTGTTCAGCTTCCATTAATGAAGGCAGGGG
____________________________________________________________
consensus GAACCATGTAAACTCTCTGTACAAGCTATCTTGTTCAGCTTCCATTAATGAAGGCAGGGG
. : . : . : . : . : . :
rJMFF050K09- AGCTATCTTCTCCGTCAATGGCGGCCCTCCGAAGTAAATCATTGACAGCCTCGATTTTGC
JMFF050K09+ AGCTATCTTCTCCGTCAATGGCGGCCCTCCGAAGTAAATCATTGACAGCCTCGATTTTGC
rJMFF037J16- AGCTATCTTCTCCGTCAATGGCGGCCCTCCGAAGTAAATCATTGACAGCCTCGATTTTGC
JMFF037J16+ AGCTATCTTCTCCGTCAATGGCGGCCCTCCGAAGTAAATCATTGACAGCCTCGATTTTGC
rJMSF044P24- AGCTATCTTCTCCGTCAATGGCGGCCCTCCGAAGTAAATCATTGACAGCCTCGATTTTGC
____________________________________________________________
consensus AGCTATCTTCTCCGTCAATGGCGGCCCTCCGAAGTAAATCATTGACAGCCTCGATTTTGC
. : . : . : . : . : . :
rJMFF050K09- GCTGTTCGACAAAACCCTGTGCCTAACGCTCTTAG
JMFF050K09+ GCTGTTCGACAAAACCCTGTGCCTAACGCTCTTAG
rJMFF037J16- GCTGTTCGACAAAACCCTGTGCCTAACGCTCTTAG
JMFF037J16+ GCTGTTCGACAAAACCCTGTGCCTAACGCTCTTAG
rJMSF044P24- GCTGTTCGACAAAACCCTGTGCCTAACGCTCTTAAACCTCCCATTCGTCATAACCTGGAG
____________________________________________________________
consensus GCTGTTCGACAAAACCCTGTGCCTAACGCTCTTAGACCTCCCATTCGTCATAACCTGGAG
. : . : . : . : . : . :
rJMSF044P24- AGAATCTCCGACGTTGATGAAGAAGGAGTGTTGGTCGGGGGGGACAGACATCCAGCTGCC
____________________________________________________________
consensus AGAATCTCCGACGTTGATGAAGAAGGAGTGTTGGTCGGGGGGGACAGACATCCAGCTGCC
. : . : . : . : . : . :
rJMSF044P24- GTCGTTCAACGCGATTTGAAGGCCGGAGGTGTTGTTGGATCTGAGAACGGAGATGATCTG
____________________________________________________________
consensus GTCGTTCAACGCGATTTGAAGGCCGGAGGTGTTGTTGGATCTGAGAACGGAGATGATCTG
. : . : . : . : . : . :
rJMSF044P24- AGGGTCGGTGTGCTCTCCGAAGCCAATCGGGTTTTTCCCGAGCTCCGGGCAGGGCGGGTA
JMSF044P24+ AATCGGGTTTTTCCCGAGCTCCGGGCAGGGCGGGTA
____________________________________________________________
consensus AGGGTCGGTGTGCTCTCCGAAGCCAATCGGGTTTTTCCCGAGCTCCGGGCAGGGCGGGTA
. : . : . : . : . : . :
rJMSF044P24- GTGATTCAGCCGGAAAACAGAGTCGCTCTGTTCATCCATTAGCAGTTTACTAAACACATT
JMFS131G12+ GTTCATCCATTAGCAGTTTACTAAACACATT
JMSF044P24+ GTGATTCAGCCGGAAAACAGAGTCGCTCTGTTCATCCATTAGCAGTTTACTAAACACATT
____________________________________________________________
consensus GTGATTCAGCCGGAAAACAGAGTCGCTCTGTTCATCCATTAGCAGTTTACTAAACACATT
. : . : . : . : . : . :
rJMSF044P24- CCGAGGATGAATCTTTAAACCATCCGCTAATAATTCAAGAATCTCGCAGGCCATTCTCTT
JMFS131G12+ CCGAGGATGAATCTTTAAACCATCCGCTAATAATTCAAGAATCTCGCAGGCCATTCTCTT
JMSF044P24+ CCGAGGATGAATCTTTAAACCATCCGCTAATAATTCAAGAATCTCGCAGGCCATTCTCTT
____________________________________________________________
consensus CCGAGGATGAATCTTTAAACCATCCGCTAATAATTCAAGAATCTCGCAGGCCATTCTCTT
. : . : . : . : . : . :
rJMSF044P24- CACTGCCGTCACATATTCATTCACAGCAGTGCGGAGATTTTTCCGGCGATAAGCCCATGA
JMFS131G12+ CACTGCCGTCACATATTCATTCACAGCAGTGCGGAGA-TTTTCCGGCGATAAGCCCATGA
JMSF044P24+ CACTGCCGTCACATATTCATTCACAGCAGTGCGGAGA-TTTTCCGGCGATAAGCCCATGA
____________________________________________________________
consensus CACTGCCGTCACATATTCATTCACAGCAGTGCGGAGA-TTTTCCGGCGATAAGCCCATGA
. : . : . : . : . : . :
rJMSF044P24- TGGAAGAGAACTTTTTGGAAATTGAGTTGTGGGTGACGGGTAAAAAGGANAATGTATT
JMFS131G12+ TGGAAGAGAAC-TTTTGGAAATTGAGTTGTGGGTGACGGGTAGAGAGGAGAATGTATTCG
JMSF044P24+ TGGAAGAGAAC-TTTTGGAAATTGAGTTGTGGGTGACGGGTAGAGAGGAGAATGTATTCG
____________________________________________________________
consensus TGGAAGAGAAC-TTTTGGAAATTGAGTTGTGGGTGACGGGTAGAGAGGAGAATGTATTCG
. : . : . : . : . : . :
JMFS131G12+ ACCCAGCCGATATCGCCGCAGGCGCCGACGTTCTTATTGCCGTAGCCGAAGGGGTCAGGG
JMSF044P24+ ACCCAGCCGATATCGCCGCAGGCGCCGACGTTCTTATTGCCGTAGCCGAAGGGGTCAGGG
____________________________________________________________
consensus ACCCAGCCGATATCGCCGCAGGCGCCGACGTTCTTATTGCCGTAGCCGAAGGGGTCAGGG
. : . : . : . : . : . :
JMFS131G12+ GGGCCTGCTTTGAGCTTCTCCGACAGGGGAGAGGAGAAGAATCTGAGGGCCTCTGATTCG
JMSF044P24+ GGGCCTGCTTTGAGCTTCTCCGACAGGGGAGAGGAGAAGAATCTGAGGGCCTCTGATTCG
____________________________________________________________
consensus GGGCCTGCTTTGAGCTTCTCCGACAGGGGAGAGGAGAAGAATCTGAGGGCCTCTGATTCG
. : . : . : . : . : . :
JMFS131G12+ AGTGTGGATATGAAGTCAGAAGGGACGCCGTGGTTGACAACCTTAAAGAACCCGAACTCC
JMSF044P24+ AGTGTGGATATGAAGTCAGAAGGGACGCCGTGGTTGACAACCTTAAAGAACCCGAACTCC
____________________________________________________________
consensus AGTGTGGATATGAAGTCAGAAGGGACGCCGTGGTTGACAACCTTAAAGAACCCGAACTCC
. : . : . : . : . : . :
JMFS131G12+ TCGCAGGCCTTGACGAGGAGGTGTTTGGAGTCGGGCTTGGAGAGGTCTATCAACGGCACG
JMSF044P24+ TCGCAGGCCTTGACGAGGAGGTGTTTGGAGTCGGGCTTGGAGAGGTCTATCAACGGCACG
____________________________________________________________
consensus TCGCAGGCCTTGACGAGGAGGTGTTTGGAGTCGGGCTTGGAGAGGTCTATCAACGGCACG
. : . : . : . : . : . :
JMFS131G12+ GCGCCGGCAGGGAAAAGTGCCGGCGGTTTGCAGGTCTTGACGACGGAGGAGAACTTGGAC
JMSF044P24+ GCGCCGGCAGGGAAAAGTGCCGGCGGTTTGCAGGTCTTGACGACGGAGGAGAACTTGGAC
____________________________________________________________
consensus GCGCCGGCAGGGAAAAGTGCCGGCGGTTTGCAGGTCTTGACGACGGAGGAGAACTTGGAC
. : . : . : . : . : . :
JMFS131G12+ AAGACCACCATGGGTGCTGGCTGGGAATTTAATTAAGATGATTGATTGATGGAATGTGAA
JMSF044P24+ AAGACCACCATGGGTGCTGGCTGGGAATTTAATTAAGATGATTGATTGATGGAATGTGAA
____________________________________________________________
consensus AAGACCACCATGGGTGCTGGCTGGGAATTTAATTAAGATGATTGATTGATGGAATGTGAA
. : . : . : . : . : . :
JMFS131G12+ GATGGTTTTTGATGGTTGTGTTGTTGGGAGCTA
JMSF044P24+ GATGGTTTTTGATGGTTGTGTTGTTGGGAGCTATGGATGAGGTAAGAGATGTTTGAGTTC
____________________________________________________________
consensus GATGGTTTTTGATGGTTGTGTTGTTGGGAGCTATGGATGAGGTAAGAGATGTTTGAGTTC