clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF044D04 | Sequence | 429 | 009516 (14) | gb|KCW63894.1| | 5e-12 | hypothetical protein EUGRSUZ_G01572 [Eucalyptus grandis] | 508 | 009516 (14) | ref|XP_004228424.1| | 72.4 | PREDICTED: uncharacterized protein LOC101261845 [Solanum lycopersicum] |
JMFN007A03 | Sequence | 610 | 009516 (14) | ref|XP_004228424.1| | 72.8 | PREDICTED: uncharacterized protein LOC101261845 [Solanum lycopersicum] | |||||
JMFN037C11 | Sequence | 478 | 009516 (14) | ref|XP_004228424.1| | 72.8 | PREDICTED: uncharacterized protein LOC101261845 [Solanum lycopersicum] | |||||
JMSF002N20 | Sequence | 339 | 009516 (14) | gb|KDO70213.1| | 6e-04 | hypothetical protein CISIN_1g047444mg [Citrus sinensis] | 600 | 009516 (14) | ref|XP_004228424.1| | 72.8 | PREDICTED: uncharacterized protein LOC101261845 [Solanum lycopersicum] |
JMSF013N11 | Sequence | 499 | 009516 (14) | ref|XP_004228424.1| | 72.8 | PREDICTED: uncharacterized protein LOC101261845 [Solanum lycopersicum] | 634 | 009516 (14) | ref|XP_004228424.1| | 72.8 | PREDICTED: uncharacterized protein LOC101261845 [Solanum lycopersicum] |
JMSF020P10 | Sequence | 657 | 009516 (14) | ref|XP_004228424.1| | 72.8 | PREDICTED: uncharacterized protein LOC101261845 [Solanum lycopersicum] | 600 | 009516 (14) | ref|XP_004228424.1| | 72.8 | PREDICTED: uncharacterized protein LOC101261845 [Solanum lycopersicum] |
JMSF032N19 | Sequence | 654 | 009516 (14) | ref|XP_004228424.1| | 72.8 | PREDICTED: uncharacterized protein LOC101261845 [Solanum lycopersicum] | 600 | 009516 (14) | ref|XP_004228424.1| | 72.8 | PREDICTED: uncharacterized protein LOC101261845 [Solanum lycopersicum] |
JMSF044B24 | Sequence | 663 | 009516 (14) | ref|XP_004228424.1| | 70.1 | PREDICTED: uncharacterized protein LOC101261845 [Solanum lycopersicum] | 617 | 009516 (14) | ref|XP_004228424.1| | 70.1 | PREDICTED: uncharacterized protein LOC101261845 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMSF032N19+ TGCACATATACTATTTCCCTTATGTTTTGCATTACTTATTTCGAAAAAACAA
rJMSF013N11- CCTTATGTTTTGCATTACTTATTTCGAAAAAACAA
rJMSF020P10- A
rJMSF002N20- A
rJMSF032N19- A
JMFN007A03+ TTTCCCTTATGTTTTGCATTACTTATTTCGAAAAAACAA
rJMFF044D04- TTTCCCTTATGTTTTGCATTACTTATTTCGAAAAAACAA
JMFF044D04+ CCCTTATGTTTTGCATTACTTATTTCGAAAAAACAA
JMSF020P10+ TTTTTTTGCACATATACTATTTCCCTTATGTTTTGCATTACTTATTTCGAAAAAACAA
rJMSF044B24- TTATTTCGAAAAAACAA
JMSF044B24+ TTTCCCTTATGTTTTGCATTACTTATTTCGAAAAAACAA
____________________________________________________________
consensus TTTTTTTGCACATATACTATTTCCCTTATGTTTTGCATTACTTATTTCGAAAAAACAA
. : . : . : . : . : . :
JMSF032N19+ AAATCAAAATACACTTAAGAGCGAAGAGGCTACATACATGATACAACCGCAACCAACACT
rJMSF013N11- AAATCAAAATACACTTAAGAGCGAAGAGGCTACATACATGATACAACCGCAACCAACACT
rJMSF020P10- AAATCAAAATACACTTAAGAGCGAAGAGGCTACATACATGATACAACCGCAACCAACACT
JMFN037C11+ ATCAAAATACACTTAAGAGCGAAGAGGCTACATACATGATACAACCGCAACCAACACT
rJMSF002N20- AAATCAAAATACACTTAAGAGCGAAGAGGCTACATACATGATACAACCGCAACCAACACT
rJMSF032N19- AAATCAAAATACACTTAAGAGCGAAGAGGCTACATACATGATACAACCGCAACCAACACT
JMFN007A03+ AAATCAAAATACACTTAAGAGCGAAGAGGCTACATACATGATACAACCGCAACCAACACT
rJMFF044D04- AAATCAAAATACACTTAAGAGCGAAGAGGCTACATACATGATACAACCGCAACCAACACT
JMFF044D04+ AAATCAAAATACACTTAAGAGCGAAGAGGCTACATACATGATACAACCGCAACCAACACT
JMSF020P10+ AAATCAAAATACACTTAAGAGCGAAGAGGCTACATACATGATACAACCGCAACCAACACT
rJMSF044B24- AAATCAAAATACACTTAAGAGCGAAGAGGCTACATACATGATACAACCGCAACCAACACT
JMSF044B24+ AAATCAAAATACACTTAAGAGCGAAGAGGCTACATACATGATACAACCGCAACCAACACT
____________________________________________________________
consensus AAATCAAAATACACTTAAGAGCGAAGAGGCTACATACATGATACAACCGCAACCAACACT
. : . : . : . : . : . :
JMSF032N19+ ATCAACTGTCGGTATATATTACATCATACCACTCTGTATAAACCGCTAGGATTGAGCTAT
rJMSF013N11- ATCAACTGTCGGTATATATTACATCATACCACTCTGTATAAACCGCTAGGATTGAGCTAT
rJMSF020P10- ATCAACTGTCGGTATATATTACATCATACCACTCTGTATAAACCGCTAGGATTGAGCTAT
JMFN037C11+ ATCAACTGTCGGTATATATTACATCATACCACTCTGTATAAACCGCTAGGATTGAGCTAT
rJMSF002N20- ATCAACTGTCGGTATATATTACATCATACCACTCTGTATAAACCGCTAGGATTGAGCTAT
rJMSF032N19- ATCAACTGTCGGTATATATTACATCATACCACTCTGTATAAACCGCTAGGATTGAGCTAT
JMFN007A03+ ATCAACTGTCGGTATATATTACATCATACCACTCTGTATAAACCGCTAGGATTGAGCTAT
JMSF013N11+ AACCGCTAGGATTGAGCTAT
rJMFF044D04- ATCAACTGTCGGTATATATTACATCATACCACTCTGTATAAACCGCTAGGATTGAGCTAT
JMFF044D04+ ATCAACTGTCGGTATATATTACATCATACCACTCTGTATAAACCGCTAGGATTGAGCTAT
JMSF020P10+ ATCAACTGTCGGTATATATTACATCATACCACTCTGTATAAACCGCTAGGATTGAGCTAT
rJMSF044B24- ATCAACTGTCGGTATATATTACATCATACCACTCTGTATAAACCGCTAGGATTGAGCTAT
JMSF044B24+ ATCAACTGTCGGTATATATTACATCATACCACTCTGTATAAACCGCTAGGATTGAGCTAT
____________________________________________________________
consensus ATCAACTGTCGGTATATATTACATCATACCACTCTGTATAAACCGCTAGGATTGAGCTAT
. : . : . : . : . : . :
JMSF032N19+ TGCCATCGGCGACGAAGGCAACAGCAGAGACACCGTCAAAACTCCGGCGGCCGTCGCAGT
rJMSF013N11- TGCCATCGGCGACGAAGGCAACAGCAGAGACACCGTCAAAACTCCGGCGGCCGTCGCAGT
rJMSF020P10- TGCCATCGGCGACGAAGGCAACAGCAGAGACACCGTCAAAACTCCGGCGGCCGTCGCAGT
JMFN037C11+ TGCCATCGGCGACGAAGGCAACAGCAGAGACACCGTCAAAACTCCGGCGGCCGTCGCAGT
rJMSF002N20- TGCCATCGGCGACGAAGGCAACAGCAGAGACACCGTCAAAACTCCGGCGGCCGTCGCAGT
rJMSF032N19- TGCCATCGGCGACGAAGGCAACAGCAGAGACACCGTCAAAACTCCGGCGGCCGTCGCAGT
JMFN007A03+ TGCCATCGGCGACGAAGGCAACAGCAGAGACACCGTCAAAACTCCGGCGGCCGTCGCAGT
JMSF013N11+ TGCCATCGGCGACGAAGGCAACAGCAGAGACACCGTCAAAACTCCGGCGGCCGTCGCAGT
rJMFF044D04- TGCCATCGGCGACGAAGGCAACAGCAGAGACACCGTCAAAACTCCGGCGGCCGTCGCAGT
JMFF044D04+ TGCCATCGGCGACGAAGGCAACAGCAGAGACACCGTCAAAACTCCGGCGGCCGTCGCAGT
JMSF020P10+ TGCCATCGGCGACGAAGGCAACAGCAGAGACACCGTCAAAACTCCGGCGGCCGTCGCAGT
rJMSF044B24- TGCCATCGGCGACGAAGGCAACAGCAGAGACACCGTCAAAACTCCGGCGGCCGTCGCAGT
JMSF044B24+ TGCCATCGGCGACGAAGGCAACAGCAGAGACACCGTCAAAACTCCGGCGGCCGTCGCAGT
____________________________________________________________
consensus TGCCATCGGCGACGAAGGCAACAGCAGAGACACCGTCAAAACTCCGGCGGCCGTCGCAGT
. : . : . : . : . : . :
JMSF032N19+ CGAACACAGAGCAAGCCAGCGGCAACGTCCGGCGAACTTCGGGTTACTTTCCCGGAAAGA
rJMSF013N11- CGAACACAGAGCAAGCCAGCGGCAACGTCCGGCGAACTTCGGGTTACTTTCCCGGAAAGA
rJMSF020P10- CGAACACAGAGCAAGCCAGCGGCAACGTCCGGCGAACTTCGGGTTACTTTCCCGGAAAGA
JMFN037C11+ CGAACACAGAGCAAGCCAGCGGCAACGTCCGGCGAACTTCGGGTTACTTTCCCGGAAAGA
rJMSF002N20- CGAACACAGAGCAAGCCAGCGGCAACGTCCGGCGAACTTCGGGTTACTTTCCCGGAAAGA
rJMSF032N19- CGAACACAGAGCAAGCCAGCGGCAACGTCCGGCGAACTTCGGGTTACTTTCCCGGAAAGA
JMFN007A03+ CGAACACAGAGCAAGCCAGCGGCAACGTCCGGCGAACTTCGGGTTACTTTCCCGGAAAGA
JMSF013N11+ CGAACACAGAGCAAGCCAGCGGCAACGTCCGGCGAACTTCGGGTTACTTTCCCGGAAAGA
rJMFF044D04- CGAACACAGAGCAAGCCAGCGGCAACGTCCGGCGAACTTCGGGTTACTTTCCCGGAAAGA
JMFF044D04+ CGAACACAGAGCAAGCCAGCGGCAACGTCCGGCGAACTTCGGGTTACTTTCCCGGAAAGA
JMSF020P10+ CGAACACAGAGCAAGCCAGCGGCAACGTCCGGCGAACTTCGGGTTACTTTCCCGGAAAGA
rJMSF044B24- CGAACACAGAGCAAGCCAGCGGCAACGTCCGGCGAACTTCGGGTTACTTTCCCGGAAAGA
JMSF044B24+ CGAACACAGAGCAAGCCAGCGGCAACGTCCGGCGAACTTCGGGTTACTTTCCCGGAAAGA
____________________________________________________________
consensus CGAACACAGAGCAAGCCAGCGGCAACGTCCGGCGAACTTCGGGTTACTTTCCCGGAAAGA
. : . : . : . : . : . :
JMSF032N19+ CATGGTGACGAAGGCGCCGGAAAACGCGACAGCGAGGGACATAAGGAACACGTGAAACAA
rJMSF013N11- CATGGTGACGAAGGCGCCGGAAAACGCGACAGCGAGGGACATAAGGAACACGTGAAACAA
rJMSF020P10- CATGGTGACGAAGGCGCCGGAAAACGCGACAGCGAGGGACATAAGGAACACGTGAAACAA
JMFN037C11+ CATGGTGACGAAGGCGCCGGAAAACGCGACAGCGAGGGACATAAGGAACACGTGAAACAA
rJMSF002N20- CATGGTGACGAAGGCGCCGGAAAACGCGACAGCGAGGGACATAAGGAACACGTGAAACAA
rJMSF032N19- CATGGTGACGAAGGCGCCGGAAAACGCGACAGCGAGGGACATAAGGAACACGTGAAACAA
JMFN007A03+ CATGGTGACGAAGGCGCCGGAAAACGCGACAGCGAGGGACATAAGGAACACGTGAAACAA
JMSF013N11+ CATGGTGACGAAGGCGCCGGAAAACGCGACAGCGAGGGACATAAGGAACACGTGAAACAA
rJMFF044D04- CATGGTGACGAAGGCGCCGGAAAACGCGACAGCGAGGGACATAAGGAACACGTGAAACAA
JMFF044D04+ CATGGTGACGAAGGCGCCGGAAAACGCGACAGCGAGGGACATAAGGAACACGTGAAACAA
JMSF020P10+ CATGGTGACGAAGGCGCCGGAAAACGCGACAGCGAGGGACATAAGGAACACGTGAAACAA
rJMSF044B24- CATGGTGACGAAGGCGCCGGAAAACGCGACAGCGAGGGACATAAGGAACACGTGAAACAA
JMSF002N20+ GGGACATAAGGAACACGTGAAACAA
JMSF044B24+ CATGGTGACGAAGGCGCCGGAAAACGCGACAGCGAGGGACATAAGGAACACGTGAAACAA
____________________________________________________________
consensus CATGGTGACGAAGGCGCCGGAAAACGCGACAGCGAGGGACATAAGGAACACGTGAAACAA
. : . : . : . : . : . :
JMSF032N19+ CGCCGGCCTTCTATTGAAGATGACGGTGGGAACTGGGTTTCCGCCTATCCTCTCGTACGG
rJMSF013N11- CGCCGGCCTTCTATTGAAGATGACGGTGGGAACTGGGTTTCCGCCTATCCTCTCGTACGG
rJMSF020P10- CGCCGGCCTTCTATTGAAGATGACGGTGGGAACTGGGTTTCCGCCTATCCTCTCGTACGG
JMFN037C11+ CGCCGGCCTTCTATTGAAGATGACGGTGGGAACTGGGTTTCCGCCTATCCTCTCGTACGG
rJMSF002N20- CGCCGGCCTTCTATTGAAGATGACGGTGGGAACTGGGTTTCCGCCTATCCTCTCGTACGG
rJMSF032N19- CGCCGGCCTTCTATTGAAGATGACGGTGGGAACTGGGTTTCCGCCTATCCTCTCGTACGG
JMFN007A03+ CGCCGGCCTTCTATTGAAGATGACGGTGGGAACTGGGTTTCCGCCTATCCTCTCGTACGG
JMSF013N11+ CGCCGGCCTTCTATTGAAGATGACGGTGGGAACTGGGTTTCCGCCTATCCTCTCGTACGG
rJMFF044D04- CGCCGGCCTTCTATTGAAGATGACGGTGGGAACTGGGTTTCCGCCTATCCTCTCGTACGG
JMFF044D04+ CGCCGGCCTTCTATTGAAGATGACGGTGGGAACTGGGTTTCCGCCTATCCTCTCGTACGG
JMSF020P10+ CGCCGGCCTTCTATTGAAGATGACGGTGGGAACTGGGTTTCCGCCTATCCTCTCGTACGG
rJMSF044B24- CGCCGGCCTTCTATTGAAGATGACGGTGGGAACTGGGTTTCCGCCTATCCTCCCGTACGG
JMSF002N20+ CGCCGNCCTTCTATTGAAGATGACGGTGGGAACTGGGTTTCCGCCTATCCTCTCGTACGG
JMSF044B24+ CGCCGGCCTTCTATTGAAGATGACGGTGGGAACTGGGTTTCCGCCTATCCTCCCGTACGG
____________________________________________________________
consensus CGCCGGCCTTCTATTGAAGATGACGGTGGGAACTGGGTTTCCGCCTATCCTCTCGTACGG
. : . : . : . : . : . :
JMSF032N19+ CAACGGCAGGAGCAGAAACGCCGCCGCAAATGCTACTCTAAATATTACGTCCTCCGAGCA
rJMSF013N11- CAACGGCAGGAGCAGAAACGCCGCCGCAAATGCTACTCTAAATATTACGTCCTCCGAGCA
rJMSF020P10- CAACGGCAGGAGCAGAAACGCCGCCGCAAATGCTACTCTAAATATTACGTCCTCCGAGCA
JMFN037C11+ CAACGGCAGGAGCAGAAACGCCGCCGCAAATGCTACTCTAAATATTACGTCCTCCGAGCA
rJMSF002N20- CAACGGCAGGAGCAGAAACGCCGCCGCAAATGCTACTCTAAATATTACGTCCTCCGAGCA
rJMSF032N19- CAACGGCAGGAGCAGAAACGCCGCCGCAAATGCTACTCTAAATATTACGTCCTCCGAGCA
JMFN007A03+ CAACGGCAGGAGCAGAAACGCCGCCGCAAATGCTACTCTAAATATTACGTCCTCCGAGCA
JMSF013N11+ CAACGGCAGGAGCAGAAACGCCGCCGCAAATGCTACTCTAAATATTACGTCCTCCGAGCA
rJMFF044D04- CAACGGCAGGAGCAGAAACGCCGCCGCAAATGCTACTCTAAATATTACGTCCTCCGAGCA
JMFF044D04+ CAACGGCAGGAGCAGAAACGCCGCCGCAAATGC
JMSF020P10+ CAACGGCAGGAGCAGAAACGCCGCCGCAAATGCTACTCTAAATATTACGTCCTCCGAGCA
rJMSF044B24- CAACGGCAGGAGCAGAAACGCCGCCGCAAATGCTACTCTAAATATTACGTCCTCCGAGCA
JMSF002N20+ CAACGGCAGGAGCAGAAACGCCGCCGCAAATGCTACTCTAAATATTACGTCCTCCGAGCA
JMSF044B24+ CAACGGCAGGAGCAGAAACGCCGCCGCAAATGCTACTCTAAATATTACGTCCTCCGAGCA
____________________________________________________________
consensus CAACGGCAGGAGCAGAAACGCCGCCGCAAATGCTACTCTAAATATTACGTCCTCCGAGCA
. : . : . : . : . : . :
JMSF032N19+ CGTCGTCCTCGGCATCTCGATCGCCGGTGCTCTCTGATACGAGGTTTTGTGGCGTGTTTT
rJMSF013N11- CGTCGTCCTCGGCATCTCGATCGCCGGTGCTCTCTGATACGAGGTTTTGTGGCGTGTTTT
rJMSF020P10- CGTCGTCCTCGGCATCTCGATCGCCGGTGCTCTCTGATACGAGGTTTTGTGGCGTGTTTT
JMFN037C11+ CGTCGTCCTCGGCATCTCGATCGCCGGTGCTCTCTGATACGAGGTTTTGTGGCGTGTTTT
rJMSF002N20- CGTCGTCCTCGGCATCTCGATCGCCGGTGCTCTCTGATACGAGGTTTTGTGGCGTGTTTT
rJMSF032N19- CGTCGTCCTCGGCATCTCGATCGCCGGTGCTCTCTGATACGAGGTTTTGTGGCGTGTTTT
JMFN007A03+ CGTCGTCCTCGGCATCTCGATCGCCGGTGCTCTCTGATACGAGGTTTTGTGGCGTGTTTT
JMSF013N11+ CGTCGTCCTCGGCATCTCGATCGCCGGTGCTCTCTGATACGAGGTTTTGTGGCGTGTTTT
rJMFF044D04- CGTCGTCCTCGGCATCTCGATCGCCGG
JMSF020P10+ CGTCGTCCTCGGCATCTCGATCGCCGGTGCTCTCTGATACGAGGTTTTGTGGCGTGTTTT
rJMSF044B24- CGTCGTCCTCGGCATCTCGATCGCCGGTGCTCTCTGATACGAGGTTTTGTGGCGTGTTTT
JMSF002N20+ CGTCGTCCTCGGCATCTCGATCGCCGGTGCTCTCTGATACGAGGTTTTGTGGCGTGTTTT
JMSF044B24+ CGTCGTCCTCGGCATCTCGATCGCCGGTGCTCTCTGATACGAGGTTTTGTGGCGTGTTTT
____________________________________________________________
consensus CGTCGTCCTCGGCATCTCGATCGCCGGTGCTCTCTGATACGAGGTTTTGTGGCGTGTTTT
. : . : . : . : . : . :
JMSF032N19+ TCACCACTTTTATGCATACAGAACGGGAGGAAATTGCTCGGAATCTCTGCAAACGGAATC
rJMSF013N11- TCACCACTTTTATGCATACAGAACGGGAGGAAATTGCTCGGAATCTCTGCAAACGGAATC
rJMSF020P10- TCACCACTTTTATGCATACAGAACGGGAGGAAATTGCTCGGAATCTCTGCAAACGGAATC
rJMSF002N20- TCACCACTTTTATGCATACAGAACGGGAGGAAATTGCTCGGAATCTCTGCAAACGGAATC
rJMSF032N19- TCACCACTTTTATGCATACAGAACGGGAGGAAATTGCTCGGAATCTCTGCAAACGGAATC
JMFN007A03+ TCACCACTTTTATGCATACAGAACGGGAGGAAATTGCTCGGAATCTCTGCAAACGGAATC
JMSF013N11+ TCACCACTTTTATGCATACAGAACGGGAGGAAATTGCTCGGAATCTCTGCAAACGGAATC
JMSF020P10+ TCACCACTTTTATGCATACAGAACGGGAGGAAATTGCTCGGAATCTCTGCAAACGGAATC
rJMSF044B24- TCACCACTTTTATGCATACAGAACGGGAGGAAATTGCTCGGAATCTCTGCAAACGGAATC
JMSF002N20+ TCACCACTTTTATGCATACAGAACGGGAGGAAATTGCTCGGAATCTCTGCAAACGGAATC
JMSF044B24+ TCACCACTTTTATGCATACAGAACGGGAGGAAATTGCTCGGAATCTCTGCAAACGGAATC
____________________________________________________________
consensus TCACCACTTTTATGCATACAGAACGGGAGGAAATTGCTCGGAATCTCTGCAAACGGAATC
. : . : . : . : . : . :
JMSF032N19+ TTTCCGAGGAAGGAGAAGAGAAACTACGAGTAACATACCTTGGACTTTGATGATATGCC
rJMSF013N11- TTTCCGAGGAAGGAGAAGAGAAACTACGAGTAACATACCTTGGACTTTGATGATATGCC
rJMSF020P10- TTTCCGAGGAAGGAGAAGAGAAACTACGAGTAACATACCTTGGACTTTGATGATATGCC
rJMSF002N20- TTTCCGAGGAAGGAGAAGAGAAACTACGAGTAACATACCTTGGACTTTGATGATATGCC
rJMSF032N19- TTTCCGAGGAAGGAGAAGAGAAACTACGAGTAACATACCTTGGACTTTGATGATATGCC
JMFN007A03+ TTTCC
JMSF013N11+ TTTCCGAGGAAGGAGAAGAGAAACTACGAGTAACATACCTTGGACTTTGATGATATGCC
JMSF020P10+ TTTCCGAGGAAGGAGAAGAGAAACTACGAGTAACATACCTTGGACTTTGATGATATGCC
rJMSF044B24- TTTCCGAGGAAGGAGAAGAGAAACTACGAGTAACATACCTTGGACTTTGATGATATGCC
JMSF002N20+ TTTCCGAGGAAGGAGAAGAGAAACTACGAGTAACATACCTTGGACTTTGATGATATGCC
JMSF044B24+ TTTCCGAGGAAGGAGAAGAGAAACTACGAGTAACATACCTTGGACTTTGATGATATGCCA
____________________________________________________________
consensus TTTCCGAGGAAGGAGAAGAGAAACTACGAGTAACATACCTTGGACTTTGATGATATGCCA