Contig 009515:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN020E22Sequence610009515 (3)emb|CDP11723.1|6e-89unnamed protein product [Coffea canephora]
JMFN031O02Sequence625009515 (3)emb|CDP11723.1|1e-88unnamed protein product [Coffea canephora]
JMSF043N02Sequence804009515 (3)emb|CDP11723.1|1e-127unnamed protein product [Coffea canephora]680017246ref|XP_010276769.1|7e-102PREDICTED: secretory carrier-associated membrane protein 4-like isoform X2 [Nel

Alignment

This contig is upended


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JMSF043N02+                                               TTTCCATGAAAGACAACGGGAGGA
                      ____________________________________________________________
consensus                                                 TTTCCATGAAAGACAACGGGAGGA
 
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JMSF043N02+           GCAATGGCAGCAAATATGCAAAATCCAATATGAAGCATGTAGAACAGAAAAAACCAACCA
                      ____________________________________________________________
consensus             GCAATGGCAGCAAATATGCAAAATCCAATATGAAGCATGTAGAACAGAAAAAACCAACCA
 
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JMSF043N02+           AATTTGAGTGCACTGTCAGTCCTCATTGCATTATAGAGGGGCCTATACCACAAAACATAG
                      ____________________________________________________________
consensus             AATTTGAGTGCACTGTCAGTCCTCATTGCATTATAGAGGGGCCTATACCACAAAACATAG
 
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JMFN031O02+                          AGTAAGGCATATATTACAGCGAGGAAAAAGATTTGNACACCTCCA
JMFN020E22+                          AGTAAGGCATATATTACAGCGAGGANAAAGATTTTGACACCTCCA
JMSF043N02+           GATAAGGGGCACCCAAGTAAGGCATATATTACAGCGAGGAAAAAGATTTTGACACCTCCA
                      ____________________________________________________________
consensus             GATAAGGGGCACCCAAGTAAGGCATATATTACAGCGAGGAAAAAGATTTTGACACCTCCA
 
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JMFN031O02+           CCCTTTATCCAACAAACAATCACCGCAATGATATTGAATGTAAGGCAAAGAACAATGCCC
JMFN020E22+           CCCTTTATCCAACAAACAATCACCGCAATGATATTGAATGTAAGGCAAAGAACAATGCCC
JMSF043N02+           CCCTTTATCCAACAAACAATCACCGCAATGATATTGAATGTAAGGCAAAGAACAATGCCC
                      ____________________________________________________________
consensus             CCCTTTATCCAACAAACAATCACCGCAATGATATTGAATGTAAGGCAAAGAACAATGCCC
 
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JMFN031O02+           AACCAACTAGCAAATGCCAAATACTGCATCCTCTGAGAATGAGCTGGTATTTCATTGGCT
JMFN020E22+           AACCAACTAGCAAATGCCAAATACTGCATCCTCTGAGAATGAGCTGGTATTTCATTGGCT
JMSF043N02+           AACCAACTAGCAAATGCCAAATACTGCATCCTCTGAGAATGAGCTGGTATTTCATTGGCT
                      ____________________________________________________________
consensus             AACCAACTAGCAAATGCCAAATACTGCATCCTCTGAGAATGAGCTGGTATTTCATTGGCT
 
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JMFN031O02+           ATATCATGGTGTATAATTGGCAAAAAGGGAGGCCAGTTCTTATCATTGACAGGCACACCA
JMFN020E22+           ATATCATGGTGTATAATTGGCAAAAAGGGAGGCCAGTTCTTATCATTGACAGGCACACCA
JMSF043N02+           ATATCATGGTGTATAATTGGCAAAAAGGGAGGCCAGTTCTTATCATTGACAGGCACACCA
                      ____________________________________________________________
consensus             ATATCATGGTGTATAATTGGCAAAAAGGGAGGCCAGTTCTTATCATTGACAGGCACACCA
 
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JMFN031O02+           GCACTAGTAACAGCATCTTCTCTGCGTTTGATGTCCCTTTCCCTCCTTTTCAAATCGGCT
JMFN020E22+           GCACTAGTAACAGCATCTTCTCTGCGTTTGATGTCCCTTTCCCTCCTTTTCAAATCGGCT
JMSF043N02+           GCACTAGTAACAGCATCTTCTCTGCGTTTGATGTCCCTTTCCCTCCTTTTCAAATCGGCT
                      ____________________________________________________________
consensus             GCACTAGTAACAGCATCTTCTCTGCGTTTGATGTCCCTTTCCCTCCTTTTCAAATCGGCT
 
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JMFN031O02+           TCCCAATTCGCCAGTTCCCTCTCTTTCTTCTTTGGATCATTCATTGAATCCAACGGTATA
JMFN020E22+           TCCCAATTCGCCAGTTCCCTCTCTTTCTTCTTTGGATCATTCATTGAATCCAACGGTATA
JMSF043N02+           TCCCAATTCGCCAGTTCCCTCTCTTTCTTCTTTGGATCATTCATTGAATCCAACGGTATA
                      ____________________________________________________________
consensus             TCCCAATTCGCCAGTTCCCTCTCTTTCTTCTTTGGATCATTCATTGAATCCAACGGTATA
 
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JMFN031O02+           TCAACAGTAGCATCATGCTTTTGGCCAAAACCAAGAGTATTAGCTACCATTTGAGGAATG
JMFN020E22+           TCAACAGTAGCATCATGCTTTTGGCCAAAACCAAGAGTATTAGCTACCATTTGAGGAATG
JMSF043N02+           TCAACAGTAGCATCATGCTTTTGGCCAAAACCAAGAGTATTAGCTACCATTTGAGGAATG
                      ____________________________________________________________
consensus             TCAACAGTAGCATCATGCTTTTGGCCAAAACCAAGAGTATTAGCTACCATTTGAGGAATG
 
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JMFN031O02+           CGTGATTTTGATCCTGCAGCAGTGCTGCCATTCGAAAATGGATTGACTTCTTGCTCTTCT
JMFN020E22+           CGTGATTTTGATCCTGCAGCAGTGCTGCCATTCGAAAATGGATTGACTTCTTGCTCTTCT
JMSF043N02+           CGTGATTTTGATCCTGCAGCAGTGCTGCCATTCGAAAATGGATTGACTTCTTGCTCTTCT
                      ____________________________________________________________
consensus             CGTGATTTTGATCCTGCAGCAGTGCTGCCATTCGAAAATGGATTGACTTCTTGCTCTTCT
 
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JMFN031O02+           TCGTCAAAAGGATTGGGGTCGTTCCGCCGAT                             
JMFN020E22+           TCGTCAAAAGGATTGGGGTCGTTCCGCCGATTCATG                        
JMSF043N02+           TCGTCAAAAGGATTGGGGTCGTTCCGCCGATTCATGGTCGTCCCGATTTCTCCGACCAGA
                      ____________________________________________________________
consensus             TCGTCAAAAGGATTGGGGTCGTTCCGCCGATTCATGGTCGTCCCGATTTCTCCGACCAGA
 
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JMSF043N02+           TTCTCCGAACAATTTCGCCAAATTAATAACAACTCAGAACTCAGAAGTGGTGGTTCAGTT
                      ____________________________________________________________
consensus             TTCTCCGAACAATTTCGCCAAATTAATAACAACTCAGAACTCAGAAGTGGTGGTTCAGTT
 
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JMSF043N02+           GGACAAACACTCCTGTATTTTAGTTAACACCACGCCGCAAGGAAAGTATTTTGCTTCCCC
                      ____________________________________________________________
consensus             GGACAAACACTCCTGTATTTTAGTTAACACCACGCCGCAAGGAAAGTATTTTGCTTCCCC