Contig 009514:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF043K07Sequence727009514 (2)ref|XP_006343561.1|233PREDICTED: uncharacterized protein LOC102588202 [Solanum tuberosum]704009514 (2)ref|XP_002270456.1|263PREDICTED: uncharacterized protein LOC100246646 [Vitis vinifera] emb|CBI36618.3|

Alignment

This contig is upended


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rJMSF043K07-                                         TTGAGTTCTTTACTCAAGTACAAGAATAA
                      ____________________________________________________________
consensus                                            TTGAGTTCTTTACTCAAGTACAAGAATAA
 
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rJMSF043K07-          ATGCTACATTTGCTTTTCCACCTTTTTCCATCTGAATTTCATTATGGTCGTGTTGGGAGT
                      ____________________________________________________________
consensus             ATGCTACATTTGCTTTTCCACCTTTTTCCATCTGAATTTCATTATGGTCGTGTTGGGAGT
 
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rJMSF043K07-          GAGGGCCATTGGGGAGGCCAGGAAGGAAAACAATTGGATGTCTGTACATTGTACTTACAA
                      ____________________________________________________________
consensus             GAGGGCCATTGGGGAGGCCAGGAAGGAAAACAATTGGATGTCTGTACATTGTACTTACAA
 
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rJMSF043K07-          GTCATAGGAAACAGGGAGGCCCATCCACAAAAGAAGCCTCCGGGGCCGATCTAAGAACCT
                      ____________________________________________________________
consensus             GTCATAGGAAACAGGGAGGCCCATCCACAAAAGAAGCCTCCGGGGCCGATCTAAGAACCT
 
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rJMSF043K07-          GGCTTGCCACGCAGGTTCCTCGCTCTCGTAAACGAAACCACATTTCTTGTAGAGGTTAAG
                      ____________________________________________________________
consensus             GGCTTGCCACGCAGGTTCCTCGCTCTCGTAAACGAAACCACATTTCTTGTAGAGGTTAAG
 
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rJMSF043K07-          TGCAGGCTCATTGTCGATGGCAACATGGACATACAAATCACTCATTCCCCACTCTTCAGC
JMSF043K07+                                                               TCTTCAGC
                      ____________________________________________________________
consensus             TGCAGGCTCATTGTCGATGGCAACATGGACATACAAATCACTCATTCCCCACTCTTCAGC
 
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rJMSF043K07-          AACCATCCTTGCCTGCGCAATGAGTGCATAACCCAACCCATTTCTACGCAGTTCTTTAGC
JMSF043K07+           AACCATCCTTGCCTGCGCAATGAGTGCATAACCCAACCCATTTCTACGCAGTTCTTTAGC
                      ____________________________________________________________
consensus             AACCATCCTTGCCTGCGCAATGAGTGCATAACCCAACCCATTTCTACGCAGTTCTTTAGC
 
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rJMSF043K07-          AACACATACATTACTAAGGTATGCTCTTGCAAAATCAGCTCCAATTCCCTTAGGTTTCGT
JMSF043K07+           AACACATACATTACTAAGGTATGCTCTTGCAAAATCAGCTCCAATTCCCTTAGGTTTCGT
                      ____________________________________________________________
consensus             AACACATACATTACTAAGGTATGCTCTTGCAAAATCAGCTCCAATTCCCTTAGGTTTCGT
 
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rJMSF043K07-          TCCTATTATTTCATCTGGAAGGCTGATGCACTGGTTAAGATCTAGAGACCCAATCACTAC
JMSF043K07+           TCCTATTATTTCATCTGGAAGGCTGATGCACTGGTTAAGATCTAGAGACCCAATCACTAC
                      ____________________________________________________________
consensus             TCCTATTATTTCATCTGGAAGGCTGATGCACTGGTTAAGATCTAGAGACCCAATCACTAC
 
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rJMSF043K07-          TCTATTTTCCATATTATCTGGACATTTGTATGATGTACATAAATCATGCGAAACACTTGA
JMSF043K07+           TCTATTTTCCATATTATCTGGACATTTGTATGATGTACATAAATCATGCGAAACACTTGA
                      ____________________________________________________________
consensus             TCTATTTTCCATATTATCTGGACATTTGTATGATGTACATAAATCATGCGAAACACTTGA
 
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rJMSF043K07-          CACTTGAGATAAAGGTACAGTGGCATTGATGCAGGAAACTCTTCC-AAACCCAACCTTTT
JMSF043K07+           CACTTGAGATAAAGGTACAGTGGCATTGATGCAGGAAACTCTTCCAAAACCCAACCTTTT
                      ____________________________________________________________
consensus             CACTTGAGATAAAGGTACAGTGGCATTGATGCAGGAAACTCTTCCAAAACCCAACCTTTT
 
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rJMSF043K07-          CCCTGCAATGCGTTCCTTCAATGCTTCGAATTCACGTTCAGCCCAAGTACTTTTTATGTT
JMSF043K07+           CCCTGCAATGCGTTCCTTCAATGCTTCGAATTCACGTTCAG-CCAAGTACTTTTTATGTT
                      ____________________________________________________________
consensus             CCCTGCAATGCGTTCCTTCAATGCTTCGAATTCACGTTCAGCCCAAGTACTTTTTATGTT
 
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rJMSF043K07-          CCTAATATCACTCGAT                                            
JMSF043K07+           CCTAATATCACTCGATGTTGATAGAGTCATTGTGGGTGACATAGAAAGTCTGTACGCGAA
                      ____________________________________________________________
consensus             CCTAATATCACTCGATGTTGATAGAGTCATTGTGGGTGACATAGAAAGTCTGTACGCGAA
 
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JMSF043K07+           GTGAAGCAGCAGCCCATAGCTCACTCTCGGATTTGGCTTCTGAGACATTGAGCAAAGACC
                      ____________________________________________________________
consensus             GTGAAGCAGCAGCCCATAGCTCACTCTCGGATTTGGCTTCTGAGACATTGAGCAAAGACC
 
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JMSF043K07+           TGTCGATTACAACGGGCGGCGGCGGCGGTTGGTGGTGGTGGGAGACCTGAGAGAGGATAA
                      ____________________________________________________________
consensus             TGTCGATTACAACGGGCGGCGGCGGCGGTTGGTGGTGGTGGGAGACCTGAGAGAGGATAA
 
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JMSF043K07+           CGCGAGAGCGGTAGCGATAGGGGGCGAGGGTGAGGGTGGGCTTGGGGGAAAGAGATGAAA
                      ____________________________________________________________
consensus             CGCGAGAGCGGTAGCGATAGGGGGCGAGGGTGAGGGTGGGCTTGGGGGAAAGAGATGAAA
 
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JMSF043K07+           GAGAAGGGAAGGTATATTGGAGTGAAGAAGAGGATAGTAATGGAGAAAGGACGGCCATGT
                      ____________________________________________________________
consensus             GAGAAGGGAAGGTATATTGGAGTGAAGAAGAGGATAGTAATGGAGAAAGGACGGCCATGT
 
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JMSF043K07+           TTTCCCCCCTCTGGATTTCCTCCTTCAGTTCCAAGATTTTCTTGAGATAGCCTCTTTCCC
                      ____________________________________________________________
consensus             TTTCCCCCCTCTGGATTTCCTCCTTCAGTTCCAAGATTTTCTTGAGATAGCCTCTTTCCC