Contig 009514:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF043K07Sequence727009514 (2)ref|XP_006343561.1|233PREDICTED: uncharacterized protein LOC102588202 [Solanum tuberosum]704009514 (2)ref|XP_002270456.1|263PREDICTED: uncharacterized protein LOC100246646 [Vitis vinifera] emb|CBI36618.3|

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF043K07- TTGAGTTCTTTACTCAAGTACAAGAATAA
                      ____________________________________________________________
consensus TTGAGTTCTTTACTCAAGTACAAGAATAA
 
. : . : . : . : . : . :
rJMSF043K07- ATGCTACATTTGCTTTTCCACCTTTTTCCATCTGAATTTCATTATGGTCGTGTTGGGAGT
                      ____________________________________________________________
consensus ATGCTACATTTGCTTTTCCACCTTTTTCCATCTGAATTTCATTATGGTCGTGTTGGGAGT
 
. : . : . : . : . : . :
rJMSF043K07- GAGGGCCATTGGGGAGGCCAGGAAGGAAAACAATTGGATGTCTGTACATTGTACTTACAA
                      ____________________________________________________________
consensus GAGGGCCATTGGGGAGGCCAGGAAGGAAAACAATTGGATGTCTGTACATTGTACTTACAA
 
. : . : . : . : . : . :
rJMSF043K07- GTCATAGGAAACAGGGAGGCCCATCCACAAAAGAAGCCTCCGGGGCCGATCTAAGAACCT
                      ____________________________________________________________
consensus GTCATAGGAAACAGGGAGGCCCATCCACAAAAGAAGCCTCCGGGGCCGATCTAAGAACCT
 
. : . : . : . : . : . :
rJMSF043K07- GGCTTGCCACGCAGGTTCCTCGCTCTCGTAAACGAAACCACATTTCTTGTAGAGGTTAAG
                      ____________________________________________________________
consensus GGCTTGCCACGCAGGTTCCTCGCTCTCGTAAACGAAACCACATTTCTTGTAGAGGTTAAG
 
. : . : . : . : . : . :
rJMSF043K07- TGCAGGCTCATTGTCGATGGCAACATGGACATACAAATCACTCATTCCCCACTCTTCAGC
JMSF043K07+ TCTTCAGC
                      ____________________________________________________________
consensus TGCAGGCTCATTGTCGATGGCAACATGGACATACAAATCACTCATTCCCCACTCTTCAGC
 
. : . : . : . : . : . :
rJMSF043K07- AACCATCCTTGCCTGCGCAATGAGTGCATAACCCAACCCATTTCTACGCAGTTCTTTAGC
JMSF043K07+ AACCATCCTTGCCTGCGCAATGAGTGCATAACCCAACCCATTTCTACGCAGTTCTTTAGC
                      ____________________________________________________________
consensus AACCATCCTTGCCTGCGCAATGAGTGCATAACCCAACCCATTTCTACGCAGTTCTTTAGC
 
. : . : . : . : . : . :
rJMSF043K07- AACACATACATTACTAAGGTATGCTCTTGCAAAATCAGCTCCAATTCCCTTAGGTTTCGT
JMSF043K07+ AACACATACATTACTAAGGTATGCTCTTGCAAAATCAGCTCCAATTCCCTTAGGTTTCGT
                      ____________________________________________________________
consensus AACACATACATTACTAAGGTATGCTCTTGCAAAATCAGCTCCAATTCCCTTAGGTTTCGT
 
. : . : . : . : . : . :
rJMSF043K07- TCCTATTATTTCATCTGGAAGGCTGATGCACTGGTTAAGATCTAGAGACCCAATCACTAC
JMSF043K07+ TCCTATTATTTCATCTGGAAGGCTGATGCACTGGTTAAGATCTAGAGACCCAATCACTAC
                      ____________________________________________________________
consensus TCCTATTATTTCATCTGGAAGGCTGATGCACTGGTTAAGATCTAGAGACCCAATCACTAC
 
. : . : . : . : . : . :
rJMSF043K07- TCTATTTTCCATATTATCTGGACATTTGTATGATGTACATAAATCATGCGAAACACTTGA
JMSF043K07+ TCTATTTTCCATATTATCTGGACATTTGTATGATGTACATAAATCATGCGAAACACTTGA
                      ____________________________________________________________
consensus TCTATTTTCCATATTATCTGGACATTTGTATGATGTACATAAATCATGCGAAACACTTGA
 
. : . : . : . : . : . :
rJMSF043K07- CACTTGAGATAAAGGTACAGTGGCATTGATGCAGGAAACTCTTCC-AAACCCAACCTTTT
JMSF043K07+ CACTTGAGATAAAGGTACAGTGGCATTGATGCAGGAAACTCTTCCAAAACCCAACCTTTT
                      ____________________________________________________________
consensus CACTTGAGATAAAGGTACAGTGGCATTGATGCAGGAAACTCTTCCAAAACCCAACCTTTT
 
. : . : . : . : . : . :
rJMSF043K07- CCCTGCAATGCGTTCCTTCAATGCTTCGAATTCACGTTCAGCCCAAGTACTTTTTATGTT
JMSF043K07+ CCCTGCAATGCGTTCCTTCAATGCTTCGAATTCACGTTCAG-CCAAGTACTTTTTATGTT
                      ____________________________________________________________
consensus CCCTGCAATGCGTTCCTTCAATGCTTCGAATTCACGTTCAGCCCAAGTACTTTTTATGTT
 
. : . : . : . : . : . :
rJMSF043K07- CCTAATATCACTCGAT
JMSF043K07+ CCTAATATCACTCGATGTTGATAGAGTCATTGTGGGTGACATAGAAAGTCTGTACGCGAA
                      ____________________________________________________________
consensus CCTAATATCACTCGATGTTGATAGAGTCATTGTGGGTGACATAGAAAGTCTGTACGCGAA
 
. : . : . : . : . : . :
JMSF043K07+ GTGAAGCAGCAGCCCATAGCTCACTCTCGGATTTGGCTTCTGAGACATTGAGCAAAGACC
                      ____________________________________________________________
consensus GTGAAGCAGCAGCCCATAGCTCACTCTCGGATTTGGCTTCTGAGACATTGAGCAAAGACC
 
. : . : . : . : . : . :
JMSF043K07+ TGTCGATTACAACGGGCGGCGGCGGCGGTTGGTGGTGGTGGGAGACCTGAGAGAGGATAA
                      ____________________________________________________________
consensus TGTCGATTACAACGGGCGGCGGCGGCGGTTGGTGGTGGTGGGAGACCTGAGAGAGGATAA
 
. : . : . : . : . : . :
JMSF043K07+ CGCGAGAGCGGTAGCGATAGGGGGCGAGGGTGAGGGTGGGCTTGGGGGAAAGAGATGAAA
                      ____________________________________________________________
consensus CGCGAGAGCGGTAGCGATAGGGGGCGAGGGTGAGGGTGGGCTTGGGGGAAAGAGATGAAA
 
. : . : . : . : . : . :
JMSF043K07+ GAGAAGGGAAGGTATATTGGAGTGAAGAAGAGGATAGTAATGGAGAAAGGACGGCCATGT
                      ____________________________________________________________
consensus GAGAAGGGAAGGTATATTGGAGTGAAGAAGAGGATAGTAATGGAGAAAGGACGGCCATGT
 
. : . : . : . : . : . :
JMSF043K07+ TTTCCCCCCTCTGGATTTCCTCCTTCAGTTCCAAGATTTTCTTGAGATAGCCTCTTTCCC
                      ____________________________________________________________
consensus TTTCCCCCCTCTGGATTTCCTCCTTCAGTTCCAAGATTTTCTTGAGATAGCCTCTTTCCC