Contig 009513:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS098A08+                                        ACCAGGCGCTTGCCCATCCTCAGAAAACNCA
                      ____________________________________________________________
consensus                                          ACCAGGCGCTTGCCCATCCTCAGAAAACNCA
 
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JMFS098A08+           GTATGGGCACTAAGTCGATTTGTTTGAGGTAACAGAACTCTCTCCCTTCCCTTTCTTGCT
                      ____________________________________________________________
consensus             GTATGGGCACTAAGTCGATTTGTTTGAGGTAACAGAACTCTCTCCCTTCCCTTTCTTGCT
 
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JMFS098A08+           GGTATAAACCCAGAATCAAGTGATGCATTACTAGATGACCTTATAGAGCTTCCATGAAGC
                      ____________________________________________________________
consensus             GGTATAAACCCAGAATCAAGTGATGCATTACTAGATGACCTTATAGAGCTTCCATGAAGC
 
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JMFS098A08+           AATCTCAGATTTCTATCACCGAAGGGCGAGGAATTCAGCCCTCTGGAACTGTCAGACCTC
                      ____________________________________________________________
consensus             AATCTCAGATTTCTATCACCGAAGGGCGAGGAATTCAGCCCTCTGGAACTGTCAGACCTC
 
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JMFS098A08+           TGCCAACCAGACTCAGATGAACCCTCCATTCCTATCTACGTGTAATTGCAAGAAACCCAA
JMSF051I07+                                                  GTGTANTTGCANGAAACCCAA
                      ____________________________________________________________
consensus             TGCCAACCAGACTCAGATGAACCCTCCATTCCTATCTACGTGTAATTGCAAGAAACCCAA
 
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JMFS098A08+           TGCACACTCACACAATCAAGAAATTGGGGAATTTTCAGACTCCTAAAACATTCCTTCACT
JMSF051I07+           TGCACACTCNCACACTCAAGAAATTGGGGNNTTTTCNGACTCTTAAAACANTCNTTCACT
                      ____________________________________________________________
consensus             TGCACACTCACACACTCAAGAAATTGGGGAATTTTCAGACTCTTAAAACATTCCTTCACT
 
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JMFS098A08+           TGCAACATAGCGATGTCTAATAAAGAAAATAGCTTTAACATCAGAAACCACCCAATCCCA
JMSF051I07+           TGCNACATAGCGATGTGTANTAAAGAAAATAGCTTTANCATCNGAAACCACCCANTCNCA
                      ____________________________________________________________
consensus             TGCAACATAGCGATGTGTAATAAAGAAAATAGCTTTAACATCAGAAACCACCCAATCCCA
 
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JMFS098A08+           TCATCTCACAAAACCCATAAGATCACTAGCGACCTTGTGAAAGCAACAAGAATGAGAACA
JMSF051I07+           TCNTCTCNCANAACCCATAAGATCNCTAGCGACCTTGTGANAGCAACANGANTGAGAGCA
                      ____________________________________________________________
consensus             TCATCTCACAAAACCCATAAGATCACTAGCGACCTTGTGAAAGCAACAAGAATGAGAGCA
 
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JMFS098A08+           CGCTAATCTCATCTCTCAAGAAAACAGAAATAACCCCACAGTCAAAAAAAACCAATGAAC
JMSF051I07+           CGCTANTCTCNTCTCTCNNGAAAACAGAAATANCCCCNCAGTCAAAAAAAACCANTGNNC
JMSF043H12+                                 AACAGAAATAACCCCCCNNTCAAAAAAAACCANTGANC
                      ____________________________________________________________
consensus             CGCTAATCTCATCTCTCAAGAAAACAGAAATAACCCCCCAGTCAAAAAAAACCAATGAAC
 
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JMFS098A08+           CACTGAACTGTAATGCTCTTGATCACATTCATATGAGTTTATAA                
JMSF051I07+           CACTGANCTGTAATGCTCTTGATCACANTCATATGAGTTTATAAAGAGAGAGAGAGAGAG
JMSF043H12+           CCCTGAACTGTAATGNTNTTGATCACANTCNTATGAGTTTNTAAAGAGAGAGAGAGAGAG
                      ____________________________________________________________
consensus             CACTGAACTGTAATGCTCTTGATCACATTCATATGAGTTTATAAAGAGAGAGAGAGAGAG
 
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JMSF051I07+           AGAGAGAGAGAGAGAGAGAGCAGTTATAGCAATATCAGAGTATCTCCTAC          
JMSF043H12+           AGAGAGAGAGAGAGAGAGAGCAGTTATAGCAATATCAGNGTATNTCCTACNCAGGNGAAG
                      ____________________________________________________________
consensus             AGAGAGAGAGAGAGAGAGAGCAGTTATAGCAATATCAGAGTATCTCCTACNCAGGNGAAG
 
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JMSF043H12+           GNGNTCAGCTGCTCCTATTTCAGCCAGNGCAAACAAAAGAACAAGAACCNCNCAACAATA
                      ____________________________________________________________
consensus             GNGNTCAGCTGCTCCTATTTCAGCCAGNGCAAACAAAAGAACAAGAACCNCNCAACAATA
 
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JMSF043H12+           CTTCAACTTTTTCAAAAAATAAAAATAAAAATAAAAAAATAAAACCCTGCTTTTATTACG
                      ____________________________________________________________
consensus             CTTCAACTTTTTCAAAAAATAAAAATAAAAATAAAAAAATAAAACCCTGCTTTTATTACG
 
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JMSF043H12+           NGGATGCACCGCAGCCTCACGAATACCATTTGNGGTNTTNTCNCTCGGTATAGTGATCAA
                      ____________________________________________________________
consensus             NGGATGCACCGCAGCCTCACGAATACCATTTGNGGTNTTNTCNCTCGGTATAGTGATCAA
 
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JMSF043H12+           TTTGAAAGTTCAAGNTTAACCTATAAAAATCNCTATACATAACCTCATATGGCATTAACT
                      ____________________________________________________________
consensus             TTTGAAAGTTCAAGNTTAACCTATAAAAATCNCTATACATAACCTCATATGGCATTAACT
 
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JMSF043H12+           TAAAAAAAAAAATCTTTTTTCCAATCCCACAGAAAACACGGACCCCTCATATACTTGATC
                      ____________________________________________________________
consensus             TAAAAAAAAAAATCTTTTTTCCAATCCCACAGAAAACACGGACCCCTCATATACTTGATC