Contig 009512:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS147H05Sequence625009512 (7)ref|XP_011084806.1|1e-129PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chl
JMSF025F06Sequence641009512 (7)ref|XP_006367437.1|8e-84PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chl786009512 (7)ref|XP_006367437.1|5e-131PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chl
JMSF040K16Sequence596009512 (7)ref|XP_004235222.1|3e-95PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chl829009512 (7)ref|XP_011084806.1|3e-146PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chl
JMSF043H01Sequence746009512 (7)ref|XP_004235222.1|1e-124PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chl843009512 (7)ref|XP_011084806.1|8e-122PREDICTED: uncharacterized aarF domain-containing protein kinase At5g05200, chl

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043H01-                   ATTCTTCATCGCATTTAATATATAGACTTTACTGTAAAAAGGGTGTGTTTT
rJMSF025F06-                                                                 GTTTT
rJMSF040K16-                                                                 GTTTT
                      ____________________________________________________________
consensus                      ATTCTTCATCGCATTTAATATATAGACTTTACTGTAAAAAGGGTGTGTTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043H01-          GTCTGCTATAATATTTACAGAAAGAAAGAGGAAGAAGGAAGAAGGTATAATTTCTATTAA
rJMSF025F06-          GTCTGCTATAATATTTACAGAAAGAAAGAGGAAGAAGGAAGAAGGTATAATTTCTATTAA
rJMSF040K16-          GTCTGCTATAATATTTACAGAAAGAAAGAGGAAGAAGGAAGAAGGTATAATTTCTATTAA
                      ____________________________________________________________
consensus             GTCTGCTATAATATTTACAGAAAGAAAGAGGAAGAAGGAAGAAGGTATAATTTCTATTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043H01-          GCATCCTTACTGGTATATGATTCTTTGTCCTCGATTCTGGGTGATGTTGATGCGCTGATC
rJMSF025F06-          GCATCCTTACTGGTATATGATTCTTTGTCCTCGATTCTGGGTGATGTTGATGCGCTGATC
rJMSF040K16-          GCATCCTTACTGGTATATGATTCTTTGTCCTCGATTCTGGGTGATGTTGATGCGCTGATC
                      ____________________________________________________________
consensus             GCATCCTTACTGGTATATGATTCTTTGTCCTCGATTCTGGGTGATGTTGATGCGCTGATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043H01-          GCGGAGCATGTTCATGTTTGGAGCTAACAATCTGGTGTATCTGTCAAAATACAGCAGCTG
rJMSF025F06-          GCGGAGCATGTTCATGTTTGGAGCTAACAATCTGGTGTATCTGTCAAAATACAGCAGCTG
rJMSF040K16-          GCGGAGCATGTTCATGTTTGGAGCTAACAATCTGGTGTATCTGTCAAAATACAGCAGCTG
                      ____________________________________________________________
consensus             GCGGAGCATGTTCATGTTTGGAGCTAACAATCTGGTGTATCTGTCAAAATACAGCAGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043H01-          TTTCATCAGGAGTGCAAACTCCCTGGGAAATCTCAGCCCGTAAGACTCGCTGACTCGAAC
rJMSF025F06-          TTTCATCAGGAGTGCAAACTCCCTGGGAAATCTCAGCCCGTAAGACTCGCTGACTCGAAC
rJMSF040K16-          TTTCATCAGGAGTGCAAACTCCCTGGGAAATCTCAGCCCGTAAGACTCGCTGACTCGAAC
                      ____________________________________________________________
consensus             TTTCATCAGGAGTGCAAACTCCCTGGGAAATCTCAGCCCGTAAGACTCGCTGACTCGAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043H01-          CAAATCGAGAAATAGAGCATTCATTTGTCTCTCGTCAAAAACTACATTGGCAGAGACTGC
rJMSF025F06-          CAAATCGAGAAATAGAGCATTCATTTGTCTCTCGTCAAAAACTACATTGGCAGAGGCTGC
rJMSF040K16-          CAAATCGAGAAATAGAGCATTCATTTGTCTCTCGTCAAAAACTACATTGGCAGAGACTGC
                      ____________________________________________________________
consensus             CAAATCGAGAAATAGAGCATTCATTTGTCTCTCGTCAAAAACTACATTGGCAGAGACTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043H01-          GGTTGCATTTGTGTTTGTATCCCGGGCTGCTGCAACAATGATTTCCGTATCCAATTCCTG
rJMSF025F06-          GGTTGCATTTGTGTTTGTATCCCGGGCTGCTGCAACAATGATTTCCGTATCCAATTCCTG
rJMSF040K16-          GGTTGCATTTGTGTTTGTATCCCGGGCTGCTGCAACAATGATTTCCGTATCCAATTCCTG
                      ____________________________________________________________
consensus             GGTTGCATTTGTGTTTGTATCCCGGGCTGCTGCAACAATGATTTCCGTATCCAATTCCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043H01-          TATTGACGAAAATATCTTCTCTAAATCTCTTGAAAAGGCCTTGGAATCCACATCCTTGCC
rJMSF025F06-          TATTGACGAAAATATCTTCTCTAAATCTCTTGAAAAGGCCTTGGAATCCACATCCTTGCC
rJMSF040K16-          TATTGACGAAAATATCTTCTCTAAATCTCTTGAAAAGGCCTTGGAATCCACATCCTTGCC
                      ____________________________________________________________
consensus             TATTGACGAAAATATCTTCTCTAAATCTCTTGAAAAGGCCTTGGAATCCACATCCTTGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043H01-          CGTAGCGCCCATGTCAATTAAGCCGGAAGCCATTGCATCATAATCTTCGGTCGATATGGA
rJMSF025F06-          CGTAGCGCCCATGTCAATTAAGCCGGAAGCCATTGCATCATAATCTTCGGTCGATATGGA
rJMSF040K16-          CGTAGCGCCCATGTCAATTAAGCCGGAAGCCATTGCATCATAATCTTCGGTCGATATGGA
                      ____________________________________________________________
consensus             CGTAGCGCCCATGTCAATTAAGCCGGAAGCCATTGCATCATAATCTTCGGTCGATATGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043H01-          TGTCAAAAACACTTCCATAGCCGCCCACGTTTTAGGAGATATACGACCAACAATTCCGAA
rJMSF025F06-          TGTCAAAAACACTTCCATAGCCGCCCACGTTTTAGGAGATATACGACCAACAATTCCGAA
rJMSF040K16-          TGTCAAAAACACTTCCATAGCCGCCCACGTTTTAGGAGATATACGACCAACAATTCCGAA
JMFS147H05+                                                              AATTCCGAA
                      ____________________________________________________________
consensus             TGTCAAAAACACTTCCATAGCCGCCCACGTTTTAGGAGATATACGACCAACAATTCCGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043H01-          ATCAAGAAAACCAATGCGTCCATCACGAAGAAGCCACAAGTTGCCAGCATGCACATCAGC
rJMSF025F06-          ATCAAGAAAACCAATGCGTCCATCACGAAGAAGCCACAAGTTGCCAGCATGCACATCAGC
rJMSF040K16-          ATCAAGAAAACCAATGCGTCCATCACGAAGAAGCCACAAGTTGCCAGCATGCACATCAGC
JMFS147H05+           ATCAAGANAACCAATGCGTCCATCACGAAGAAGCCACAAGTTGCCAGCATGCACATCAGC
                      ____________________________________________________________
consensus             ATCAAGAAAACCAATGCGTCCATCACGAAGAAGCCACAAGTTGCCAGCATGCACATCAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043H01-          GTGGAAGGACTCACAAGCAAGCAAGCTTCCAAACCACACATTTAAGGCAGTTATAAGACT
rJMSF025F06-          GTGGAAGGACTCACAAGCAAGCAAGCTTCCAAACCACACATTTAAGGCAGTTATAAGACT
rJMSF040K16-          GTGGAAGGACTCACAAGCAAGCAAGCTTCCAAACCACACATTTAAGGCAGTTATAAGACT
JMFS147H05+           GTGGAAGGACTCACAAGCAAGCAAGCTTCCAAACCACACATTTAAGGCAGTTATAAGACT
                      ____________________________________________________________
consensus             GTGGAAGGACTCACAAGCAAGCAAGCTTCCAAACCACACATTTAAGGCAGTTATAAGACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043H01-          GGCCTCGGGATTAGGAACGAGTGAGTTTATCGAGTCTAAATCAGTGAGGGAAACTCCATA
rJMSF025F06-          GGCCTCGGGATTAGGAACGAGTGAGTTTATCGAGTCTAAATCAGTGAGGGGAACTCCAT-
rJMSF040K16-          GGCCTCGGGATTAGGAACGAGTGAGTTTATCGAGTCTAAATCAGTGAGGGGAACTCCAT-
JMFS147H05+           GGCCTCGGGATTAGGAACGAGTGAGTTTATCGAGTCTAAATCAGTGAGGGGAACTCCAT-
                      ____________________________________________________________
consensus             GGCCTCGGGATTAGGAACGAGTGAGTTTATCGAGTCTAAATCAGTGAGGGGAACTCCAT-
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043H01-          AAAGCCTCTCCATTGTCAGGATCCGTCGTGTGCTGCATTGCCTGTACACTCTTGGTGCTG
rJMSF025F06-          AAAGCCTCTCCATTGTCAGGATCCGTCGTGTGCTGCATNGCCTGTACACTCTNGGTGCTG
rJMSF040K16-          AAAGCCTCTCCATTGTCAGGATCCGTCGTGTGCTGCATTGCCTGTACACTCTTGGTGCTG
JMFS147H05+           AAAGCCTCTCCATTGTCAGGATCCGTCGTGTGCTGCATTGCCTGTACACTCTTGGTGCTG
                      ____________________________________________________________
consensus             AAAGCCTCTCCATTGTCAGGATCCGTCGTGTGCTGCATTGCCTGTACACTCTTGGTGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF043H01-          TAGCCTGCCTAG                                                
rJMSF025F06-          TA                                                          
rJMSF040K16-          TAGCCTGCCTAGTCAGACCCATGGCTTCCAAGTATCTCCTA                   
JMFS147H05+           TAGCCTGCCTAGTCAGACCCATGGCTTCCAAGTATCTCCTAAACGCTTCAATATTTGCCG
                      ____________________________________________________________
consensus             TAGCCTGCCTAGTCAGACCCATGGCTTCCAAGTATCTCCTAAACGCTTCAATATTTGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS147H05+           CTTCTTTAGTGAAGTCAACTTCTTCAAGCATCGACTCCCTTATGTCTTTGACAATCGCAA
                      ____________________________________________________________
consensus             CTTCTTTAGTGAAGTCAACTTCTTCAAGCATCGACTCCCTTATGTCTTTGACAATCGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS147H05+           CCAGAGATGCACGATCTAATTCAGGACTCAAGAACTCCAAAGTGCGAGCCACAACGTATA
                      ____________________________________________________________
consensus             CCAGAGATGCACGATCTAATTCAGGACTCAAGAACTCCAAAGTGCGAGCCACAACGTATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS147H05+           CAAAGTTCAGATCTGCCACTAAAATATCTTCTATCCCGGGTTTCAAGACCTTTATCACAA
JMSF043H01+                                             CCCGGGTTTCAAGACCTTTATCACAA
                      ____________________________________________________________
consensus             CAAAGTTCAGATCTGCCACTAAAATATCTTCTATCCCGGGTTTCAAGACCTTTATCACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS147H05+           CATCATCTTGGGAGCCCTTTAGCCTTGCCCCATGCACCTGAGCTATAGAGGCAGAGGCAA
JMSF025F06+                                                 TGAGCTATAGAGGCAGAGGCAA
JMSF043H01+           CATCATCTTGGGAGCCCTTTAGCCTTGCCCCATGCACCTGAGCTATAGAGGCAGAGGCAA
                      ____________________________________________________________
consensus             CATCATCTTGGGAGCCCTTTAGCCTTGCCCCATGCACCTGAGCTATAGAGGCAGAGGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS147H05+           TTGGTGTAGGATCAACATACTCGAAAACCGTATCAATTGGTCTGCCTAATTCCTCACGTA
JMSF025F06+           TTGGTGTAGGATCAACATACTCGAAAACCGTATCAATTGGTCTGCCTAATTCCTCACGTA
JMSF040K16+                                                           ATTCCTCACGTA
JMSF043H01+           TTGGTGTAGGATCAACATACTCGAAAACCGTATCAATTGGTCTGCCTAATTCCTCACGTA
                      ____________________________________________________________
consensus             TTGGTGTAGGATCAACATACTCGAAAACCGTATCAATTGGTCTGCCTAATTCCTCACGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS147H05+           ATATTGCTTGAATCTGT                                           
JMSF025F06+           ATATTGCTTGAATCTGTTCATAAGGAATTGGTGGAGCCCTATCAAAACAGTACTGGAATT
JMSF040K16+           ATATTGCTTGAATCTGTTCATAAGGAATTGGTGGAGCCCTATCAAAACAGTACTGGAATT
JMSF043H01+           ATATTGCTTGAATCTGTTCATAAGGAATTGGTGGAGCCCTATCAAAACAGTACTGGAATT
                      ____________________________________________________________
consensus             ATATTGCTTGAATCTGTTCATAAGGAATTGGTGGAGCCCTATCAAAACAGTACTGGAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF025F06+           CTTGAACATATTCTGGCGGGAAAATTGTGGGTGCAGATGCTATAAACTGCCCCAATTTTA
JMSF040K16+           CTTGAACATATTCTGGCGGGAAAATTGTGGGTGCAGATGCTATAAACTGCCCCAATTTTA
JMSF043H01+           CTTGAACATATTCTGGCGGGAAAATTGTGGGTGCAGATGCTATAAACTGCCCCAATTTTA
                      ____________________________________________________________
consensus             CTTGAACATATTCTGGCGGGAAAATTGTGGGTGCAGATGCTATAAACTGCCCCAATTTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF025F06+           TATAAGTTGCACCCATGCGTTCGAACAATTTCCTCAAATATAGGGGAGATAATAATCCAA
JMSF040K16+           TATAAGTTGCACCCATGCGTTCGAACAATTTCCTCAAATATAGGGGAGATAATAATCCAA
JMSF043H01+           TATAAGTTGCACCCATGCGTTCGAACAATTTCCTCAAATATAGGGGAGATAATAATCCAA
                      ____________________________________________________________
consensus             TATAAGTTGCACCCATGCGTTCGAACAATTTCCTCAAATATAGGGGAGATAATAATCCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF025F06+           GCTGCATCTCGGTTGGTAATCTAGTGGATGAGTTTGCAGTCTTTGAGACATCGGCCAGCC
JMSF040K16+           GCTGCATCTCGGTTGGTAATCTAGTGGATGAGTTTGCAGTCTTTGAGACATCGGCCAGCC
JMSF043H01+           GCTGCATCTCGGTTGGTAATCTAGTGGATGAGTTTGCAGTCTTTGAGACATCGGCCAGCC
                      ____________________________________________________________
consensus             GCTGCATCTCGGTTGGTAATCTAGTGGATGAGTTTGCAGTCTTTGAGACATCGGCCAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF025F06+           ACTCACTACCAACCCCAATTACAGCTTGGACACCTTGAGCAAACCTTAAAGCCCCACGTG
JMSF040K16+           ACTCACTACCAACCCCAATTACAGCTTGGACACCTTGAGCAAACCTTAAAGCCCCACGTG
JMSF043H01+           ACTCACTACCAACCCCAATTACAGCTTGGACACCTTGAGCAAACCTTAAAGCCCCACGTG
                      ____________________________________________________________
consensus             ACTCACTACCAACCCCAATTACAGCTTGGACACCTTGAGCAAACCTTAAAGCCCCACGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF025F06+           GACCTGTATCTATGGACGTCTGAACAATATCCTCCACAAA-TTAGGCAAGTTCCCAAGAC
JMSF040K16+           GACCTGTATCTATGGACGTCTGAACAATATCCTCCACAAATTTAGGCAAGTTCCCAAGAC
JMSF043H01+           GACCTGTATCTATGGACGTCTGAACAATATCCTCCACAAATTTAGGCAAGTTCCCAAGAC
                      ____________________________________________________________
consensus             GACCTGTATCTATGGACGTCTGAACAATATCCTCCACAAATTTAGGCAAGTTCCCAAGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF025F06+           GATCTTGAAGACGAGTGGTGAAAATCTCCTGGGTCTGCGAATACCGGGCCAAAACAGTGA
JMSF040K16+           GATCTTGAAGACGAGTGGTGAAAATCTCCTGGGTCTGCGAATACCGGGCCAAAACAGTGA
JMSF043H01+           GATCTTGAAGACGAGTGGTGAAAATCTCCTGGGTNTGCGAATACCGGGCCAAAACAGTGA
                      ____________________________________________________________
consensus             GATCTTGAAGACGAGTGGTGAAAATCTCCTGGGTCTGCGAATACCGGGCCAAAACAGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF025F06+           ATCCAGTTCGGCGAATTCGATACTGAAGCTTCATTGGCTTATCCAATCTGTTTATAGTTG
JMSF040K16+           ATCCAGTTCGGCGAATTCGATACTGAAGCTTCATTGGCTTATCCAATCTGTTTATAGTTG
JMSF043H01+           ATCCAGTTCGGCGAATTCGATACTGAAGCTTCATTGGCTTATCCAATCTGTTTATAGTTG
                      ____________________________________________________________
consensus             ATCCAGTTCGGCGAATTCGATACTGAAGCTTCATTGGCTTATCCAATCTGTTTATAGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF025F06+           GAAACTGAGAGTGATGAAGAAGAGATGAACGTCCATGAGCGACGCCTCTTAGCACTGAAA
JMSF040K16+           GAAACTGAGAGTGATGAAGAAGAGATGAACGTCCATGAGCGACGCCTCTTAGCACTGAAA
JMSF043H01+           GAAACTGAGAGTGATGAAGAAGAGATGAACGTCCATGAGCGACGCCTNTTAGCACTGAAA
                      ____________________________________________________________
consensus             GAAACTGAGAGTGATGAAGAAGAGATGAACGTCCATGAGCGACGCCTCTTAGCACTGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF025F06+           CCCCCGCCATTCGTCTTC                                          
JMSF040K16+           CCCCCGCCATTCGTCTTCCACAGAGGGCTAAGAAAACCAGGA                  
JMSF043H01+           CCCCCGCCATTCGTCTTCCACAGAGGGCTAAGAAAACCAGGACAATAGTATCATTACTCC
                      ____________________________________________________________
consensus             CCCCCGCCATTCGTCTTCCACAGAGGGCTAAGAAAACCAGGACAATAGTATCATTACTCC