Contig 009510:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF043D17-                                                    GTCAGTTTGGCCAAGGAA
                      ____________________________________________________________
consensus                                                       GTCAGTTTGGCCAAGGAA
 
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rJMSF043D17-          GGCAAAATGTCACCATTACAAATAACTTAAGGTCTCTGGCAATACTGCCATATGGCTGTA
                      ____________________________________________________________
consensus             GGCAAAATGTCACCATTACAAATAACTTAAGGTCTCTGGCAATACTGCCATATGGCTGTA
 
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rJMSF043D17-          TTGCACAGGCAAAAAGAGAAAGAAACTACAGTTCTCATGGGGCCGGAGTGGATATCCGAA
                      ____________________________________________________________
consensus             TTGCACAGGCAAAAAGAGAAAGAAACTACAGTTCTCATGGGGCCGGAGTGGATATCCGAA
 
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rJMSF043D17-          TTTTGAATTCCAAAGTTTTCAATCAGATAGCCATCCAAAAATGTTCAAATTTTAGTTTAG
                      ____________________________________________________________
consensus             TTTTGAATTCCAAAGTTTTCAATCAGATAGCCATCCAAAAATGTTCAAATTTTAGTTTAG
 
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rJMSF043D17-          GATACAGGACAACAAAGTTGGTGAAGCTTATGGCATGCTGCCGGTAATGCTTTTGGAAAA
                      ____________________________________________________________
consensus             GATACAGGACAACAAAGTTGGTGAAGCTTATGGCATGCTGCCGGTAATGCTTTTGGAAAA
 
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rJMSF043D17-          ACTCAGTTTCTGGGTACGCTTTTGTAAGAAGTCAGTTTCTGGCGATCTATATCCTCCACC
                      ____________________________________________________________
consensus             ACTCAGTTTCTGGGTACGCTTTTGTAAGAAGTCAGTTTCTGGCGATCTATATCCTCCACC
 
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rJMSF043D17-          TTGATCACCAAAACCTTTCCATTCTCTTCCTCTGTCCATGGTATTGAGCGTTTATCGAAA
                      ____________________________________________________________
consensus             TTGATCACCAAAACCTTTCCATTCTCTTCCTCTGTCCATGGTATTGAGCGTTTATCGAAA
 
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rJMSF043D17-          TACTTTGCAACCAAACGCTTCCGAGGTCCATTGGTGGCATCATCATCATTGACCCCAACA
                      ____________________________________________________________
consensus             TACTTTGCAACCAAACGCTTCCGAGGTCCATTGGTGGCATCATCATCATTGACCCCAACA
 
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rJMSF043D17-          ATCACACGAAAGCACTGGAAAGGTGGAAGTGGGAGTCCCACATAAGTATTGAACTGCCCT
                      ____________________________________________________________
consensus             ATCACACGAAAGCACTGGAAAGGTGGAAGTGGGAGTCCCACATAAGTATTGAACTGCCCT
 
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rJMSF043D17-          TTCAGAAAGTCAATTGCATCTTTTGGCGCAAAATGGTGCACATCAAAGGACAACTCTTCA
                      ____________________________________________________________
consensus             TTCAGAAAGTCAATTGCATCTTTTGGCGCAAAATGGTGCACATCAAAGGACAACTCTTCA
 
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rJMSF043D17-          CACTTATATCTGGGTTGAAGAAGCTTTTGAGCAGACTTTTCATCTGCTTCCCGAGCCTTC
                      ____________________________________________________________
consensus             CACTTATATCTGGGTTGAAGAAGCTTTTGAGCAGACTTTTCATCTGCTTCCCGAGCCTTC
 
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rJMSF043D17-          TTCATAAAAAAATTTCCCTCCTCTAGAAGCCTGTATGCTCTTACGCGGTCTTCTTTAACA
                      ____________________________________________________________
consensus             TTCATAAAAAAATTTCCCTCCTCTAGAAGCCTGTATGCTCTTACGCGGTCTTCTTTAACA
 
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rJMSF043D17-          AATGCCTCAATAGCAGCCTTATAGTACTCTTTCATTGTAGTCCAGTGCTCCTTTACTGCT
                      ____________________________________________________________
consensus             AATGCCTCAATAGCAGCCTTATAGTACTCTTTCATTGTAGTCCAGTGCTCCTTTACTGCT
 
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rJMSF043D17-          TCTCGCANAACTTCATAACTTTCCTCATTATCATCATCATCATCATCATTCATTTGGGTA
JMSF043D17+                                     ATTATCATCATCATCATCATCATTCATTTGGGTA
                      ____________________________________________________________
consensus             TCTCGCANAACTTCATAACTTTCCTCATTATCATCATCATCATCATCATTCATTTGGGTA
 
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rJMSF043D17-          ACATGAGGTCTTATAATGACAGTGCGATGTTCTATCTCTGG                   
JMSF043D17+           ACATGAGGTCTTATAATGACAGTGCGATGTTCTATCTCTGGTAATTCTAGCGGTTTATCA
                      ____________________________________________________________
consensus             ACATGAGGTCTTATAATGACAGTGCGATGTTCTATCTCTGGTAATTCTAGCGGTTTATCA
 
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JMSF043D17+           ACAACAAATCTACTTCTCCGAGATTCCTTTGAAGGTCGAGCTACTACTTCATCATCATAT
                      ____________________________________________________________
consensus             ACAACAAATCTACTTCTCCGAGATTCCTTTGAAGGTCGAGCTACTACTTCATCATCATAT
 
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JMSF043D17+           CTTCCAGGGTGAGAAAACAATGACTGTAAAATTTCTTTTTGAAGTTCATTTTTCCTTTTC
                      ____________________________________________________________
consensus             CTTCCAGGGTGAGAAAACAATGACTGTAAAATTTCTTTTTGAAGTTCATTTTTCCTTTTC
 
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JMSF043D17+           ATCTTTTGTAACTGAAGTTCATCTGCAGCTGTGTTATTTGTTTTGGTCCTTTTGGAACTT
                      ____________________________________________________________
consensus             ATCTTTTGTAACTGAAGTTCATCTGCAGCTGTGTTATTTGTTTTGGTCCTTTTGGAACTT
 
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JMSF043D17+           TCAGCAGAATCTCGAGATGAATTTGATTTCAGATTTGGAAATTCTTCAGAATCTATGCTG
                      ____________________________________________________________
consensus             TCAGCAGAATCTCGAGATGAATTTGATTTCAGATTTGGAAATTCTTCAGAATCTATGCTG
 
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JMSF043D17+           ACAATATCATCAGACTTCTCCAAAGTTGCTGCTGACAAATCTATGAGTGACTCCATACTC
                      ____________________________________________________________
consensus             ACAATATCATCAGACTTCTCCAAAGTTGCTGCTGACAAATCTATGAGTGACTCCATACTC
 
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JMSF043D17+           TTGTTCACATCAAATCCACATTGACCAACAACATTGTGGATTGTACTCATATTGAGTGAA
                      ____________________________________________________________
consensus             TTGTTCACATCAAATCCACATTGACCAACAACATTGTGGATTGTACTCATATTGAGTGAA
 
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JMSF043D17+           AAGCCATCTCCAAGCATTTTAAACAGAAATTCCTCAACATCATTGTGAAGTGTGTCACTC
                      ____________________________________________________________
consensus             AAGCCATCTCCAAGCATTTTAAACAGAAATTCCTCAACATCATTGTGAAGTGTGTCACTC
 
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JMSF043D17+           TTCTCTGTATTCTCAGAACTTGAAGTTGTAGATGTGCTAGCTTGCAGATTGCAGATTATG
                      ____________________________________________________________
consensus             TTCTCTGTATTCTCAGAACTTGAAGTTGTAGATGTGCTAGCTTGCAGATTGCAGATTATG
 
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JMSF043D17+           TCACCAGCAATAGAAGGATCGCGACCTGCTTTACAATAAGCTGAAGCAATATCTTCAAGT
                      ____________________________________________________________
consensus             TCACCAGCAATAGAAGGATCGCGACCTGCTTTACAATAAGCTGAAGCAATATCTTCAAGT
 
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JMSF043D17+           GAAACGACAGAACCAAATGCTTCAAGCAGCTGCTGAAGATTCTTACGGTCCTCATCACCA
                      ____________________________________________________________
consensus             GAAACGACAGAACCAAATGCTTCAAGCAGCTGCTGAAGATTCTTACGGTCCTCATCACCA
 
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JMSF043D17+           TAAGAAAAGTTTGAAGGAAGCATTTCCATTTTCATCATCTTGAGCGAGCAAAGCTTCCTT
                      ____________________________________________________________
consensus             TAAGAAAAGTTTGAAGGAAGCATTTCCATTTTCATCATCTTGAGCGAGCAAAGCTTCCTT
 
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JMSF043D17+           TCTTCTCCTTCACCTCTGCGAACTGTAGACTTTAGTATTCAGCGTCCCACGCTCTCCAAC
                      ____________________________________________________________
consensus             TCTTCTCCTTCACCTCTGCGAACTGTAGACTTTAGTATTCAGCGTCCCACGCTCTCCAAC