Contig 009510:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF043D17Sequence814009510 (2)ref|XP_009614542.1|2e-33PREDICTED: uncharacterized protein LOC104107441 isoform X1 [Nicotiana tomentosi839009510 (2)ref|XP_009789573.1|4e-49PREDICTED: uncharacterized protein LOC104237132 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF043D17- GTCAGTTTGGCCAAGGAA
                      ____________________________________________________________
consensus GTCAGTTTGGCCAAGGAA
 
. : . : . : . : . : . :
rJMSF043D17- GGCAAAATGTCACCATTACAAATAACTTAAGGTCTCTGGCAATACTGCCATATGGCTGTA
                      ____________________________________________________________
consensus GGCAAAATGTCACCATTACAAATAACTTAAGGTCTCTGGCAATACTGCCATATGGCTGTA
 
. : . : . : . : . : . :
rJMSF043D17- TTGCACAGGCAAAAAGAGAAAGAAACTACAGTTCTCATGGGGCCGGAGTGGATATCCGAA
                      ____________________________________________________________
consensus TTGCACAGGCAAAAAGAGAAAGAAACTACAGTTCTCATGGGGCCGGAGTGGATATCCGAA
 
. : . : . : . : . : . :
rJMSF043D17- TTTTGAATTCCAAAGTTTTCAATCAGATAGCCATCCAAAAATGTTCAAATTTTAGTTTAG
                      ____________________________________________________________
consensus TTTTGAATTCCAAAGTTTTCAATCAGATAGCCATCCAAAAATGTTCAAATTTTAGTTTAG
 
. : . : . : . : . : . :
rJMSF043D17- GATACAGGACAACAAAGTTGGTGAAGCTTATGGCATGCTGCCGGTAATGCTTTTGGAAAA
                      ____________________________________________________________
consensus GATACAGGACAACAAAGTTGGTGAAGCTTATGGCATGCTGCCGGTAATGCTTTTGGAAAA
 
. : . : . : . : . : . :
rJMSF043D17- ACTCAGTTTCTGGGTACGCTTTTGTAAGAAGTCAGTTTCTGGCGATCTATATCCTCCACC
                      ____________________________________________________________
consensus ACTCAGTTTCTGGGTACGCTTTTGTAAGAAGTCAGTTTCTGGCGATCTATATCCTCCACC
 
. : . : . : . : . : . :
rJMSF043D17- TTGATCACCAAAACCTTTCCATTCTCTTCCTCTGTCCATGGTATTGAGCGTTTATCGAAA
                      ____________________________________________________________
consensus TTGATCACCAAAACCTTTCCATTCTCTTCCTCTGTCCATGGTATTGAGCGTTTATCGAAA
 
. : . : . : . : . : . :
rJMSF043D17- TACTTTGCAACCAAACGCTTCCGAGGTCCATTGGTGGCATCATCATCATTGACCCCAACA
                      ____________________________________________________________
consensus TACTTTGCAACCAAACGCTTCCGAGGTCCATTGGTGGCATCATCATCATTGACCCCAACA
 
. : . : . : . : . : . :
rJMSF043D17- ATCACACGAAAGCACTGGAAAGGTGGAAGTGGGAGTCCCACATAAGTATTGAACTGCCCT
                      ____________________________________________________________
consensus ATCACACGAAAGCACTGGAAAGGTGGAAGTGGGAGTCCCACATAAGTATTGAACTGCCCT
 
. : . : . : . : . : . :
rJMSF043D17- TTCAGAAAGTCAATTGCATCTTTTGGCGCAAAATGGTGCACATCAAAGGACAACTCTTCA
                      ____________________________________________________________
consensus TTCAGAAAGTCAATTGCATCTTTTGGCGCAAAATGGTGCACATCAAAGGACAACTCTTCA
 
. : . : . : . : . : . :
rJMSF043D17- CACTTATATCTGGGTTGAAGAAGCTTTTGAGCAGACTTTTCATCTGCTTCCCGAGCCTTC
                      ____________________________________________________________
consensus CACTTATATCTGGGTTGAAGAAGCTTTTGAGCAGACTTTTCATCTGCTTCCCGAGCCTTC
 
. : . : . : . : . : . :
rJMSF043D17- TTCATAAAAAAATTTCCCTCCTCTAGAAGCCTGTATGCTCTTACGCGGTCTTCTTTAACA
                      ____________________________________________________________
consensus TTCATAAAAAAATTTCCCTCCTCTAGAAGCCTGTATGCTCTTACGCGGTCTTCTTTAACA
 
. : . : . : . : . : . :
rJMSF043D17- AATGCCTCAATAGCAGCCTTATAGTACTCTTTCATTGTAGTCCAGTGCTCCTTTACTGCT
                      ____________________________________________________________
consensus AATGCCTCAATAGCAGCCTTATAGTACTCTTTCATTGTAGTCCAGTGCTCCTTTACTGCT
 
. : . : . : . : . : . :
rJMSF043D17- TCTCGCANAACTTCATAACTTTCCTCATTATCATCATCATCATCATCATTCATTTGGGTA
JMSF043D17+ ATTATCATCATCATCATCATCATTCATTTGGGTA
                      ____________________________________________________________
consensus TCTCGCANAACTTCATAACTTTCCTCATTATCATCATCATCATCATCATTCATTTGGGTA
 
. : . : . : . : . : . :
rJMSF043D17- ACATGAGGTCTTATAATGACAGTGCGATGTTCTATCTCTGG
JMSF043D17+ ACATGAGGTCTTATAATGACAGTGCGATGTTCTATCTCTGGTAATTCTAGCGGTTTATCA
                      ____________________________________________________________
consensus ACATGAGGTCTTATAATGACAGTGCGATGTTCTATCTCTGGTAATTCTAGCGGTTTATCA
 
. : . : . : . : . : . :
JMSF043D17+ ACAACAAATCTACTTCTCCGAGATTCCTTTGAAGGTCGAGCTACTACTTCATCATCATAT
                      ____________________________________________________________
consensus ACAACAAATCTACTTCTCCGAGATTCCTTTGAAGGTCGAGCTACTACTTCATCATCATAT
 
. : . : . : . : . : . :
JMSF043D17+ CTTCCAGGGTGAGAAAACAATGACTGTAAAATTTCTTTTTGAAGTTCATTTTTCCTTTTC
                      ____________________________________________________________
consensus CTTCCAGGGTGAGAAAACAATGACTGTAAAATTTCTTTTTGAAGTTCATTTTTCCTTTTC
 
. : . : . : . : . : . :
JMSF043D17+ ATCTTTTGTAACTGAAGTTCATCTGCAGCTGTGTTATTTGTTTTGGTCCTTTTGGAACTT
                      ____________________________________________________________
consensus ATCTTTTGTAACTGAAGTTCATCTGCAGCTGTGTTATTTGTTTTGGTCCTTTTGGAACTT
 
. : . : . : . : . : . :
JMSF043D17+ TCAGCAGAATCTCGAGATGAATTTGATTTCAGATTTGGAAATTCTTCAGAATCTATGCTG
                      ____________________________________________________________
consensus TCAGCAGAATCTCGAGATGAATTTGATTTCAGATTTGGAAATTCTTCAGAATCTATGCTG
 
. : . : . : . : . : . :
JMSF043D17+ ACAATATCATCAGACTTCTCCAAAGTTGCTGCTGACAAATCTATGAGTGACTCCATACTC
                      ____________________________________________________________
consensus ACAATATCATCAGACTTCTCCAAAGTTGCTGCTGACAAATCTATGAGTGACTCCATACTC
 
. : . : . : . : . : . :
JMSF043D17+ TTGTTCACATCAAATCCACATTGACCAACAACATTGTGGATTGTACTCATATTGAGTGAA
                      ____________________________________________________________
consensus TTGTTCACATCAAATCCACATTGACCAACAACATTGTGGATTGTACTCATATTGAGTGAA
 
. : . : . : . : . : . :
JMSF043D17+ AAGCCATCTCCAAGCATTTTAAACAGAAATTCCTCAACATCATTGTGAAGTGTGTCACTC
                      ____________________________________________________________
consensus AAGCCATCTCCAAGCATTTTAAACAGAAATTCCTCAACATCATTGTGAAGTGTGTCACTC
 
. : . : . : . : . : . :
JMSF043D17+ TTCTCTGTATTCTCAGAACTTGAAGTTGTAGATGTGCTAGCTTGCAGATTGCAGATTATG
                      ____________________________________________________________
consensus TTCTCTGTATTCTCAGAACTTGAAGTTGTAGATGTGCTAGCTTGCAGATTGCAGATTATG
 
. : . : . : . : . : . :
JMSF043D17+ TCACCAGCAATAGAAGGATCGCGACCTGCTTTACAATAAGCTGAAGCAATATCTTCAAGT
                      ____________________________________________________________
consensus TCACCAGCAATAGAAGGATCGCGACCTGCTTTACAATAAGCTGAAGCAATATCTTCAAGT
 
. : . : . : . : . : . :
JMSF043D17+ GAAACGACAGAACCAAATGCTTCAAGCAGCTGCTGAAGATTCTTACGGTCCTCATCACCA
                      ____________________________________________________________
consensus GAAACGACAGAACCAAATGCTTCAAGCAGCTGCTGAAGATTCTTACGGTCCTCATCACCA
 
. : . : . : . : . : . :
JMSF043D17+ TAAGAAAAGTTTGAAGGAAGCATTTCCATTTTCATCATCTTGAGCGAGCAAAGCTTCCTT
                      ____________________________________________________________
consensus TAAGAAAAGTTTGAAGGAAGCATTTCCATTTTCATCATCTTGAGCGAGCAAAGCTTCCTT
 
. : . : . : . : . : . :
JMSF043D17+ TCTTCTCCTTCACCTCTGCGAACTGTAGACTTTAGTATTCAGCGTCCCACGCTCTCCAAC
                      ____________________________________________________________
consensus TCTTCTCCTTCACCTCTGCGAACTGTAGACTTTAGTATTCAGCGTCCCACGCTCTCCAAC