Contig 009509:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS026C07Sequence631009509 (6)ref|XP_009587166.1|2e-47PREDICTED: probable receptor protein kinase TMK1 [Nicotiana tomentosiformis]
JMFS035B02Sequence419009509 (6)ref|XP_004249911.1|2e-15PREDICTED: probable receptor protein kinase TMK1 [Solanum lycopersicum]
JMFS041D02Sequence645009509 (6)ref|XP_009587166.1|1e-41PREDICTED: probable receptor protein kinase TMK1 [Nicotiana tomentosiformis]
JMFS161E06Sequence315009509 (6)ref|XP_004249911.1|2e-32PREDICTED: probable receptor protein kinase TMK1 [Solanum lycopersicum]
JMSF010F07Sequence308009509 (6)781004206 (2)emb|CBI28627.3|5e-124unnamed protein product [Vitis vinifera]
JMSF043A03Sequence641009509 (6)ref|XP_004249911.1|2e-29PREDICTED: probable receptor protein kinase TMK1 [Solanum lycopersicum]591004206 (2)emb|CBI28627.3|4e-65unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMFS026C07+                                                           CAACAGATTGCA
                      ____________________________________________________________
consensus                                                             CAACAGATTGCA
 
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JMFS026C07+           AAGAAGACATCCCAGCAAAGAAATCAGCAGGAACTGAAGTGAACTGATTGTTACTAAGCA
JMFS041D02+                          CAAAGAAATCAGCAGGANCTGAAGTGAACTGATTGTTACTAAGCA
                      ____________________________________________________________
consensus             AAGAAGACATCCCAGCAAAGAAATCAGCAGGAACTGAAGTGAACTGATTGTTACTAAGCA
 
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JMFS026C07+           TTAACACTCGCAATGAACCCAAACCACTCAAGCTGGGCAATGGTCCAGAAATGTTGTTCC
JMFS041D02+           TTAACACTCGCAATGAACCCAACCCACTCAAGCTGGGCAATGGTCCAGNAATGTTGTTCC
                      ____________________________________________________________
consensus             TTAACACTCGCAATGAACCCAACCCACTCAAGCTGGGCAATGGTCCAGAAATGTTGTTCC
 
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JMFS026C07+           ATTGGAGCTCTAATCGCTCAAGCTGAGTGAGTTTAGAGAGTTCAGAAGGAAGAGTACCTT
JMFS035B02+                                         GTTTAGAGAGTTCAAAAGGAAGAGTACCTT
JMFS161E06+                           CTCAAGCTGAGTGAGTTTAGAGAGTTCAGAAGGAAGAGTACCTT
JMFS041D02+           ATTGGAGCTCTAATCGCTCAAGCTGAGTGAGTTTAGAGAGTTCAGAAGGAAGAGTACCTT
JMSF043A03+                           CTCAAGCTGAGTGAGTTTAGAGAGTTCAGAAGGAAGAGTACCTT
                      ____________________________________________________________
consensus             ATTGGAGCTCTAATCGCTCAAGCTGAGTGAGTTTAGAGAGTTCAGAAGGAAGAGTACCTT
 
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JMFS026C07+           GAA-GGCCATGGTGGCCAATTTGGATCCG-GATAACCCGCTTGTCCTGGCAAACCACATG
JMFS035B02+           GAAGGGCCATGGAGGCCAATTTGGATCCGAGATAACCCGCTTGTCCTGGCAAACCACATG
JMFS161E06+           GAA-GGCCATGGTGGCCAATTTGGATCCG-GATAACCCGCTTGTCCTGGCAAACCACATG
JMFS041D02+           GAA-GGCCATGGTGGCCAATTTGGATCCG-GATAACCCGCTTGTCCTGGCAAACCACATG
JMSF043A03+           GAA-GGCCATGGTGGCCAATTTGGATCCG-GATAACCCGCTTGTCCTGGCAAACCACATG
                      ____________________________________________________________
consensus             GAA-GGCCATGGTGGCCAATTTGGATCCG-GATAACCCGCTTGTCCTGGCAAACCACATG
 
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JMFS026C07+           GTCCCACTTGCATGGATCCGGGTCGGACCACCCCAGCTCCGATGGTGGGTTCAGGCTCTT
JMFS035B02+           GTCCCACTTGCATGGATCCGGGTCGGACCACCCCAGCTCCGATGGTGGGTTCAGGCTCTT
JMFS161E06+           GTCCCACTTGCATGGATCCGGGTCGGACCACCCCAGCTCCGATGGTGGGTTCAGGCTCTT
JMFS041D02+           GTCCCACTTGCATGGATCCGGGTCGGACCACCCCAGCTCCGATGGTGGGTTCAGGCTCTT
JMSF043A03+           GTCCCACTTGCATGGATCCGGGTCGGACCACCCCAGCTCCGATGGTGGGTTCAGGCTCTT
                      ____________________________________________________________
consensus             GTCCCACTTGCATGGATCCGGGTCGGACCACCCCAGCTCCGATGGTGGGTTCAGGCTCTT
 
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JMFS026C07+           CTTGAGAGCCAGCATCACAGAACCATCATCTTCTTGAGACTCTGCGTACAGAAAAACACT
JMFS035B02+           CTTGAGAGCCAGCATCACAGAACCGTGATCTTCTTGAGGCTCTGCGTACAGAAAAACACT
JMFS161E06+           CTTGAGAGCCAGCATCACAGAACCATCATCTTCTTGAGACTCTGCGTACAGAAAAACACT
JMFS041D02+           CTTGAGAGCCAGCATCACAGAACCATCATCTTCTTGAGACTCTGCGTACAGAAAAACACT
JMSF043A03+           CTTGAGAGCCAGCATCACAGAACCATCATCTTCTTGAGACTCTGCGTACAGAAAAACACT
                      ____________________________________________________________
consensus             CTTGAGAGCCAGCATCACAGAACCATCATCTTCTTGAGACTCTGCGTACAGAAAAACACT
 
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JMFS026C07+           GGGAAAAATCCACAGTAACAGTAAAGCTGAAATCTTTATCCCAAAATGTTTCATCTTCTT
JMFS035B02+           GGGAAAAATCCACAGTAACAGTGAAGGTGAAATCTTGATCCCAAAATGTTTCATCTTCTT
JMFS161E06+           GGGAAAAATCCACAGTAACATTAAAGCTGAAATCTTTATCCCAAAATGTTTCATCTTCTT
JMFS041D02+           GGGAAAAATCCACAGTAACAGTAAAGCTGAAATCTTTATCCCAAAATGTTTCATCTTCTT
JMSF010F07+                      ACAGTACCAGTAAAGCTGAAATCTTTATCCCAAAATGTTTCATCTTCTT
JMSF043A03+           GGGAAAAATCCACAGTAACAGTAAAGCTGAAATCTTTATCCCAAAATGTTTCATCTTCTT
                      ____________________________________________________________
consensus             GGGAAAAATCCACAGTAACAGTAAAGCTGAAATCTTTATCCCAAAATGTTTCATCTTCTT
 
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JMFS026C07+           CATCTAGGAAAAGATCCCGATAGCAAAGAGAGCAGATATTGAGACTAAAGGGAGGCTTTT
JMFS035B02+           CATATAGGAAAAGATCCCGATAGCAAAGAGAGCAGATATTGAGACTAAAGGGAGGCTTTT
JMFS161E06+           CATCTAGGAAAAGATCC                                           
JMFS041D02+           CATCTAGGAAAAGATCCCGATAGCAAAGAGAGCAGATATTGAGACTAAAGGGAGGCTTTT
JMSF010F07+           CATCTAGGAAAAGATCCCGATAGCAAAGAGAGCAGATATTGAGACTAAAGGGAGGCTTTT
JMSF043A03+           CATCTAGGAAAAGATCCCGATAGCAAAGAGAGCAGATATTGAGACTAAAGGGAGGCTTTT
                      ____________________________________________________________
consensus             CATCTAGGAAAAGATCCCGATAGCAAAGAGAGCAGATATTGAGACTAAAGGGAGGCTTTT
 
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JMFS026C07+           TAGGCAGAAAAAGAGAGCAGATATTCAAGATTTTAGAG-GTGCATTGAAGGAAAGGAGGA
JMFS035B02+           TAGGCATAAAAAGAGAGCAGATATTCAAGATTTTAGAGAGTGCATTGAAGGAAAGGAGGA
JMFS041D02+           TAGGCAGAAAAAGAGAGCAGATATTCAAGATTTTAGAG-GTGCATTGAAGGAAAGGAGGA
JMSF010F07+           TAGGCAGAAAAAGAGAGCAGATATTCAAGATTTTAGAG-GTGCATTGAAGGAAAGGAGGA
JMSF043A03+           TAGGCAGAAAAAGAGAGCAGATATTCAAGATTTTAGAG-GTGCATTGAAGGAAAGGAGGA
                      ____________________________________________________________
consensus             TAGGCAGAAAAAGAGAGCAGATATTCAAGATTTTAGAG-GTGCATTGAAGGAAAGGAGGA
 
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JMFS026C07+           AGAAGAAAGGGAACAGCAAAGACCAGACCAGAGAGCTTTGGGAGAAGAGAGAGAGCACAT
JMFS035B02+           AGAAGAAAGGGAACAGCAAAGGCCAGACC                               
JMFS041D02+           AGAAGAAAGGGAACAGCAAAGACCAGACCAGAGAGCTTTGGGAGAAGAGAGAGAGCACAT
JMSF010F07+           AGAAGAAAGGGAACAGCAAAGACCAGACCAGAGAGCTTTGGGAGAAGAGAGAGAGCACAT
JMSF043A03+           AGAAGAAAGGGAACAGCAAGGACCAGACCAGAGAGCTTTGGGAGAAGAGAGAGAGCACAT
                      ____________________________________________________________
consensus             AGAAGAAAGGGAACAGCAAAGACCAGACCAGAGAGCTTTGGGAGAAGAGAGAGAGCACAT
 
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JMFS026C07+           GAGGAGAGGGACCCACTTAAAC                                      
JMFS041D02+           GAGGAGAGGGACCCACTTAAACTGGAAAGCTTTT-AGAAATCAGAAAAATGGAGTTGTAT
JMSF010F07+           GAGGAGAGGGACCCACTTAAACTGGAAAGCTTTTAAGAAATCAGAAAAATGGAGTTGTAT
JMSF043A03+           GAGGAGAGGGACCCACTTAAACTGGAAAGCTTTTAAGAAATCAGAAAAATGGAGTTGTAT
                      ____________________________________________________________
consensus             GAGGAGAGGGACCCACTTAAACTGGAAAGCTTTTAAGAAATCAGAAAAATGGAGTTGTAT
 
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JMSF010F07+           GTATCCATGTATGTATTGT                                         
JMSF043A03+           GTATCCATGTATGTATTGTGAGGTTCAGGGAGAGATGAGAGTAACCGTAAAGGCTGGATG
                      ____________________________________________________________
consensus             GTATCCATGTATGTATTGTGAGGTTCAGGGAGAGATGAGAGTAACCGTAAAGGCTGGATG
 
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JMSF043A03+           ATTCTTGGGAACATGCCACACGATGCCAGCTTGTCTGTGTTTGTCAATGGTTTGTCCCTC
                      ____________________________________________________________
consensus             ATTCTTGGGAACATGCCACACGATGCCAGCTTGTCTGTGTTTGTCAATGGTTTGTCCCTC