Contig 009508:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF037G13-                                                               GGGTTTT
                      ____________________________________________________________
consensus                                                                  GGGTTTT
 
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rJMSF037G13-          TGTAGTAATAATCTTTGGAATACAAAGTTGAAAGTGATGGCGGTTGTAATATCATCCCAA
                      ____________________________________________________________
consensus             TGTAGTAATAATCTTTGGAATACAAAGTTGAAAGTGATGGCGGTTGTAATATCATCCCAA
 
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rJMSF037G13-          GCTCTTAGAAGTAAATTGAGTGCTATTTGAAAGAGCAAAATCTCAGGTGCCTAAAGCCCC
                      ____________________________________________________________
consensus             GCTCTTAGAAGTAAATTGAGTGCTATTTGAAAGAGCAAAATCTCAGGTGCCTAAAGCCCC
 
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rJMSF037G13-          TAAGAGGAATCAAAATAATTAAACTTGCATCTCAATCAAAGCAAAAGGATATGACTAATT
                      ____________________________________________________________
consensus             TAAGAGGAATCAAAATAATTAAACTTGCATCTCAATCAAAGCAAAAGGATATGACTAATT
 
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rJMSF037G13-          TTGGTGGGCAAACTTGATTCCCTTTTCAATGGATGCTTTCAGCTCAGGTTTAAGCTTTTC
rJMSF042O01-           TGGTGGGCAAACTTGATTCCCTTTTCAATGGATGCTTTCAGCTCAGGTTTAAGCTTTTC
                      ____________________________________________________________
consensus             TTGGTGGGCAAACTTGATTCCCTTTTCAATGGATGCTTTCAGCTCAGGTTTAAGCTTTTC
 
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rJMSF037G13-          AAGTCCTTCCTTCTCAAAGTCCGAAAGTGTGCCCAACCCTAGGACTTCGTCAACACCATT
rJMSF042O01-          AAGTCCTTCCTTCTCAAAGTCCGAAAGTGTGCCCAACCCTAGGACTTCGTCAACACCATT
                      ____________________________________________________________
consensus             AAGTCCTTCCTTCTCAAAGTCCGAAAGTGTGCCCAACCCTAGGACTTCGTCAACACCATT
 
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rJMSF037G13-          TTTCCCTACTCTCACCTTAGATGCAAAGAAAGGAAGTTCAGTGACAGTAGACTGCACAAA
rJMSF042O01-          TTTCCCTACTCTCACCTTAGATGCAAAGAAAGGAAGTTCAGTGACAGTAGACTGCACAAA
                      ____________________________________________________________
consensus             TTTCCCTACTCTCACCTTAGATGCAAAGAAAGGAAGTTCAGTGACAGTAGACTGCACAAA
 
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rJMSF037G13-          AGAACACTCCACAACATCTGGAGCTCCATTGAGTCCTTTCAAGCAAGCATCCGCAAATAC
rJMSF042O01-          AGAACACTCCACAACATCTGGAGCTCCATTGAGTCCTTTCAAGCAAGCATCCGCAAATAC
                      ____________________________________________________________
consensus             AGAACACTCCACAACATCTGGAGCTCCATTGAGTCCTTTCAAGCAAGCATCCGCAAATAC
 
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rJMSF037G13-          GGCCCCAGCGTAGGCCATAGAGAGGGTGGCTGAACCTTTCCCTGCTTTGGCTTCTACAAC
rJMSF042O01-          GGCCCCAGCGTAGGCCATAGAGAGGGTGGCTGAACCTTTCCCTGCTTTGGCTTCTACAAC
                      ____________________________________________________________
consensus             GGCCCCAGCGTAGGCCATAGAGAGGGTGGCTGAACCTTTCCCTGCTTTGGCTTCTACAAC
 
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rJMSF037G13-          CTCTGTTCCACCATCTTGGGTTCGTTTGGTGAGCGCTACAATCTCATCATCTGACAAGTT
rJMSF042O01-          CTCTGTTCCACCATCTTGGGTTCGTTTGGTGAGCGCTACAATCTCATCATCTGACAAGTT
                      ____________________________________________________________
consensus             CTCTGTTCCACCATCTTGGGTTCGTTTGGTGAGCGCTACAATCTCATCATCTGACAAGTT
 
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rJMSF037G13-          GGCTTTTGGAGTAGCTTGGGAAAACAGTGGGAGAATTGTTATGCCTGCATGACCACCGAC
rJMSF042O01-          GGCTTTTGGAGTAGCTTGGGAAAACAGTGGGAGAATTGTTATGCCTGCATGACCACCGAC
JMSF042O01+                  GGAGTAGCTTGGGAAAACAGTGGGAGAATTGTTATGCCTGCATGACCACCGAC
                      ____________________________________________________________
consensus             GGCTTTTGGAGTAGCTTGGGAAAACAGTGGGAGAATTGTTATGCCTGCATGACCACCGAC
 
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rJMSF037G13-          TACAGGTACATTGACCTCAGCAACATTAACTTTAGCTTTTCCAGCATAGAAAGTCTTGGC
rJMSF042O01-          TACAGGTACATTGACCTCAGCAACATTAACTTTAGCTTTTCCAGCATAGAAAGTCTTGGC
JMSF037G13+                                                TTTCCAGCATAGAAAGTCTTGGC
JMSF042O01+           TACAGGTACATTGACCTCAGCAACATTAACTTTAGCTTTTCCAGCATAGAAAGTCTTGGC
                      ____________________________________________________________
consensus             TACAGGTACATTGACCTCAGCAACATTAACTTTAGCTTTTCCAGCATAGAAAGTCTTGGC
 
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rJMSF037G13-          CCTGACTACATCAAGGGTGGTAACACCAAAGAGTCTCTTTTCATCATAAGTTCC      
rJMSF042O01-          CCTGACTACATCAAGGGTGGTAACACCAAAGAGTCTCTTTTCATCATAAGTTCCAGCCTT
JMSF037G13+           CCTGANTACATCAAGGGTGGTAACACCAAAGAGTCTCTTTTCATCATAAGTTCCAGCCTT
JMSF042O01+           CCTGACTACATCAAGGGTGGTAACACCAAAGAGTCTCTTTTCATCATAAGTTCCAGCCTT
                      ____________________________________________________________
consensus             CCTGACTACATCAAGGGTGGTAACACCAAAGAGTCTCTTTTCATCATAAGTTCCAGCCTT
 
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rJMSF042O01-          TTT                                                         
JMSF037G13+           TTTGAAGACCTCAGCAGCAATTGGGACAGTGGAGTTCACAGGGTTGCTAATCATATTGAC
JMSF042O01+           TTTGAAGACCTCAGCAGCAATTGGGACAGTGGAGTTCACAGGGTTGCTAATCATATTGAC
                      ____________________________________________________________
consensus             TTTGAAGACCTCAGCAGCAATTGGGACAGTGGAGTTCACAGGGTTGCTAATCATATTGAC
 
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JMSF037G13+           AAGTGCATTAGGGCAATACTTGGCAATGGCAGTGCAGAGAGATTTAACAATGCCAGCATT
JMSF042O01+           AAGTGCATTAGGGCAATACTTGGCAATGGCAGTGCAGAGAGATTTAACAATGCCAGCATT
                      ____________________________________________________________
consensus             AAGTGCATTAGGGCAATACTTGGCAATGGCAGTGCAGAGAGATTTAACAATGCCAGCATT
 
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JMSF037G13+           GATGTTGAAGAGATCATCACAGGTCATGCCTGGCTTTCGTGGCACACCAGCTGGAATAAT
JMSF042O01+           GATGTTGAAGAGATCATCACGGGTCATGCCTGGCTTTCGTGGCACACCAGCTGGAATAAT
                      ____________________________________________________________
consensus             GATGTTGAAGAGATCATCACGGGTCATGCCTGGCTTTCGTGGCACACCAGCTGGAATAAT
 
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JMSF037G13+           GACAACATCAGAACCCTCCAAAGCCTTCCCAAGATTTTCATCTCCCATATACCCAACAAC
JMSF042O01+           GACAACATCAGAACCCTCCAAAGCCTTCCCAAGATTTTCATCTCCCATATACCCAACAAC
                      ____________________________________________________________
consensus             GACAACATCAGAACCCTCCAAAGCCTTCCCAAGATTTTCATCTCCCATATACCCAACAAC
 
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JMSF037G13+           CTCAGATCCGGTGTTGATATGGCTGACATCGGCGGCGACGCCAGGAGTACCCGCAATATC
JMSF042O01+           CTCAGATCCGGTGTTGATATGGCTGACATCGGCGGCGACGCCAGGAGTACCCGCAATATC
                      ____________________________________________________________
consensus             CTCAGATCCGGTGTTGATATGGCTGACATCGGCGGCGACGCCAGGAGTACCCGCAATATC
 
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JMSF037G13+           ATAGAGCTCAAGGCGAGTAACTAGAGGATTAAGCTTCATGAGCAGCGAAAGTGGCTGACC
JMSF042O01+           ATAGAGCTCAAGGCGAGTAACTAGAGGATTAAGCTTCATGAGCAGCGAAAGTGGCTGACC
                      ____________________________________________________________
consensus             ATAGAGCTCAAGGCGAGTAACTAGAGGATTAAGCTTCATGAGCAGCGAAAGTGGCTGACC
 
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JMSF037G13+           GATCCCGCCGGCAGCCCCCAAGATTGCAACTTTCCTCTCCGGAGAGGTTCCGGATGCGAA
JMSF042O01+           GATCCCGCCGGCAGCCCCCAAGATTGCAACTTTCCTCTCCGGAGAGGTTCCGGATGCGAA
                      ____________________________________________________________
consensus             GATCCCGCCGGCAGCCCCCAAGATTGCAACTTTCCTCTCCGGAGAGGTTCCGGATGCGAA
 
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JMSF037G13+           CCCTCGGCGAGAAGCATTTGAAGTGGAGCTTCTGAGAATTGATCTCAGCATTGTTGATTT
JMSF042O01+           CCCTCGGCGAGAAGCATTTGAAGTGGAGCTTCTGAGAATTGATCTCAGCATTGTTGATTT
                      ____________________________________________________________
consensus             CCCTCGGCGAGAAGCATTTGAAGTGGAGCTTCTGAGAATTGATCTCAGCATTGTTGATTT
 
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JMSF037G13+           CTAGTCCCCGTTTCTCAACTGCCTATTTTTTGAAGATGAACAAAAAACCAAACTGTAGAT
JMSF042O01+           CTAGTCCCCGTTTCTCAACTGCCTATTTTTTGAAGATGAACAAAAAACCAAACTGTAGAT
                      ____________________________________________________________
consensus             CTAGTCCCCGTTTCTCAACTGCCTATTTTTTGAAGATGAACAAAAAACCAAACTGTAGAT
 
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JMSF037G13+           TTTTTATTTTCCTAAGAAAAGTGGAGAAGAAGAGTCAAGACTCCTGCACAGCTT      
JMSF042O01+           TTTTTATTTTCCTAAGAAAAGTGGAGAAGAAGAGTCAAGACTCCTGCACAGCTTATGACC
                      ____________________________________________________________
consensus             TTTTTATTTTCCTAAGAAAAGTGGAGAAGAAGAGTCAAGACTCCTGCACAGCTTATGACC