Contig 009506:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011P10Sequence226009506 (4)720004359 (5)ref|XP_011081192.1|5e-98PREDICTED: sodium/pyruvate cotransporter BASS2, chloroplastic-like [Sesamum ind
JMSF041N22Sequence762009506 (4)ref|XP_002284920.3|1e-45PREDICTED: sodium/pyruvate cotransporter BASS2, chloroplastic isoform X1 [Vitis613004359 (5)ref|XP_011081192.1|9e-65PREDICTED: sodium/pyruvate cotransporter BASS2, chloroplastic-like [Sesamum ind
JMSF042K19Sequence801009506 (4)ref|XP_002284920.3|3e-71PREDICTED: sodium/pyruvate cotransporter BASS2, chloroplastic isoform X1 [Vitis729004359 (5)ref|XP_011081192.1|6e-98PREDICTED: sodium/pyruvate cotransporter BASS2, chloroplastic-like [Sesamum ind
JMSF049F07Sequence708009506 (4)dbj|BAJ16226.1|9e-27sodium-dependent pyruvate transporter [Flaveria trinervia]777004359 (5)ref|XP_011081192.1|1e-109PREDICTED: sodium/pyruvate cotransporter BASS2, chloroplastic-like [Sesamum ind

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042K19+ CCTCCAGGACAGCATGAAACC
                      ____________________________________________________________
consensus CCTCCAGGACAGCATGAAACC
 
. : . : . : . : . : . :
JMSF042K19+ AGGATAAGACCAGTTGCAAGGGGAGCAGACAATTTTAGAGCCCTTGAAATGGCATAGCCT
                      ____________________________________________________________
consensus AGGATAAGACCAGTTGCAAGGGGAGCAGACAATTTTAGAGCCCTTGAAATGGCATAGCCT
 
. : . : . : . : . : . :
JMSF041N22+ ACAGTCCATGGGTTCCGC
JMSF042K19+ AACAGTGGTTTAATTAAGTATTGTGCCAAAAATCCTACACCCACAGTCCATGGGTTCCGC
                      ____________________________________________________________
consensus AACAGTGGTTTAATTAAGTATTGTGCCAAAAATCCTACACCCACAGTCCATGGGTTCCGC
 
. : . : . : . : . : . :
JMSF041N22+ AGACAGCGTCTGAAGTCATCAAAAGTCAGCGTTAATCCCATCGAGAGCATGAGGAATCCC
JMSF042K19+ AGACAGCGTCTGAAGTCATCAAAAGTCAGCGTTAATCCCATCGAGAGCATGAGGAATCCC
                      ____________________________________________________________
consensus AGACAGCGTCTGAAGTCATCAAAAGTCAGCGTTAATCCCATCGAGAGCATGAGGAATCCC
 
. : . : . : . : . : . :
JMSF041N22+ AAACTAAGAGTGAAAAGGTCAGTTTCCAGCCAAGTCACCGCGGAAGGCTTGTAGATACCA
JMSF042K19+ AAACTAAGAGTGAAAAGGTCAGTTTCCAGCCAAGTCACCGCGGAAGGCTTGTAGATACCA
                      ____________________________________________________________
consensus AAACTAAGAGTGAAAAGGTCAGTTTCCAGCCAAGTCACCGCGGAAGGCTTGTAGATACCA
 
. : . : . : . : . : . :
JMSF041N22+ ATGACAGTACCTAATATAACCCACACAGGAAAAAGTGTTGTCAAAGTCTCAATGATTCTT
JMSF049F07+ ACCCACACAGGAAAAAGTGTTGTCAAAGTCTCAATGATTCTT
JMSF042K19+ ATGACAGTACCTAATATAACCCACACAGGAAAAAGTGTTGTCAAAGTCTCAATGATTCTT
                      ____________________________________________________________
consensus ATGACAGTACCTAATATAACCCACACAGGAAAAAGTGTTGTCAAAGTCTCAATGATTCTT
 
. : . : . : . : . : . :
JMSF041N22+ TCATACTGGCTCATGCCACTAGAAGAATCACCTGGAATATCTCCAGATACATTTGTAGCC
JMSF049F07+ TCATACTGGCTCATGCCACTAGAAGAATCACCTGGAATATCTCCAGATACATTTGTAGCC
JMSF042K19+ TCATACTGGCTCATGCCACTAGAAGAATCACCTGGAATATCTCCAGATACATTTGTAGCC
                      ____________________________________________________________
consensus TCATACTGGCTCATGCCACTAGAAGAATCACCTGGAATATCTCCAGATACATTTGTAGCC
 
. : . : . : . : . : . :
JMSF041N22+ GCCTTGCAAGAAAGTCTTAATTTCCACAAAGCAGGGGTTTTTATAGAAGAAAGCTTTAGC
JMSF049F07+ GCCTTGCAAGAAAGTCTTAATTTCCACAAAGCAGGGGTTTTTATAGAAGAAAGCTTTAGC
JMSF042K19+ GCCTTGCAAGAAAGTCTTAATTTCCACAAAGCAGGGGTTTTTATAGAAGAAAGCTTTAGC
                      ____________________________________________________________
consensus GCCTTGCAAGAAAGTCTTAATTTCCACAAAGCAGGGGTTTTTATAGAAGAAAGCTTTAGC
 
. : . : . : . : . : . :
JMSF041N22+ ATTCCATCAACTGAAACTTGCGGCTTATTTTGAATCCTCAAGCAATTTTTCTTAGGCTCA
JMSF049F07+ ATTCCATCAACTGAAACTTGCGGCTTATTTTGAATCCTCAAGCAATTTTTCTTAGGCTCA
JMSF042K19+ ATTCCATCAACTGAAACTTGCGGCTTATTTTGAATCCTCAAGCAATTTTTCTTAGGCTCA
                      ____________________________________________________________
consensus ATTCCATCAACTGAAACTTGCGGCTTATTTTGAATCCTCAAGCAATTTTTCTTAGGCTCA
 
. : . : . : . : . : . :
JMSF041N22+ GTTTTACTAACCCCATCTCTAAAACATAAATGGGATTGAATCCTCCTGGGAGAAAAACCA
JMSF049F07+ GTTTTACTAACCCCATCTCTAAAACATAAATGGGATTGAATCCTCCTGGGAGAAAAACCA
JMSF042K19+ GTTTTACTAACCCCATCTCTAAAACATAAATGGGATTGAATCCTCCTGGGAGAAAAACCA
                      ____________________________________________________________
consensus GTTTTACTAACCCCATCTCTAAAACATAAATGGGATTGAATCCTCCTGGGAGAAAAACCA
 
. : . : . : . : . : . :
JMSF041N22+ TGACTTGGTTTCTGAGAAGGATCAAACGACAGAAATCTAGAGTCTTTTCCCACAAATCTT
JMSF011P10+ TGAGAAGGATCAAACGACAGAAATCTAGAGTCTTTTCCCACAAATCTT
JMSF049F07+ TGACTTGGTTTCTGAGAAGGATCAAACGACAGAAATCTAGAGTCTTTTCCCACAAATCTT
JMSF042K19+ TGACTTGGTTTCTGAGAAGGATCAAACGACAGAAATCTAGAGTCTTTTCCCACAAATCTT
                      ____________________________________________________________
consensus TGACTTGGTTTCTGAGAAGGATCAAACGACAGAAATCTAGAGTCTTTTCCCACAAATCTT
 
. : . : . : . : . : . :
JMSF041N22+ GAAATAGAGGCCATGGGTTGATTTGATGAAGCTGCAGTGGGGAGTTTTGTGTCCAAGGTG
JMSF011P10+ GAAATAGAGGCCATGGGTTGATTTGATGAAGCTGCAGTGGGGAGTTTTGTGTCCAAGGTG
JMSF049F07+ GAAATAGAGGCCATGGGTTGATTTGATGAAGCTGCAGTGGGGAGTTTTGTGTCCAAGGTG
JMSF042K19+ GAAATAGAGGCCATGGGTTGATTTGATGAAGCTGCAGTGGGGAGTTTTGTGTCCAAGGTG
                      ____________________________________________________________
consensus GAAATAGAGGCCATGGGTTGATTTGATGAAGCTGCAGTGGGGAGTTTTGTGTCCAAGGTG
 
. : . : . : . : . : . :
JMSF041N22+ AGTAAATGAACAGGGCTTTCAGCTGGAAAGTGAAGTGGAACAAGGAAGCCAAGGGGGAAA
JMSF011P10+ AGTAAATGAACAGGGCTTTCAGCTGGAAAGTGAAGTGGAACAAGGAAGCCAAGGGGGAAA
JMSF049F07+ AGTAAATGAACAGGGCTTTCAGCTGGAAAGTGAAGTGGAACAAGGAAGCCAAGGGGGAAA
JMSF042K19+ AGTAAATGAACAGGGCTTTCAGCTGGAAAGTGAAGTGGAACAAGGAAGCCAAGGGGGAAA
                      ____________________________________________________________
consensus AGTAAATGAACAGGGCTTTCAGCTGGAAAGTGAAGTGGAACAAGGAAGCCAAGGGGGAAA
 
. : . : . : . : . : . :
JMSF041N22+ AGTCACAATCTCAGTCTCACGGAGGATGAGGGTCGGGATTGAAGATATTTGGAGG
JMSF011P10+ AGTCACAATCTCAGTCTCACGGAGGATGAGGGTCGGGATTGAAGATATTTGGAGG
JMSF049F07+ AGTCACAATCTCAGTCTCACGGAGGATGAGGGTCGGGATTGAAGATATTTGGAGG
JMSF042K19+ AGTCACAATCTCAGTCTCACGGAGGATGAGGGTCGGGATTGAAGATATTTGGAGGTCGTC
                      ____________________________________________________________
consensus AGTCACAATCTCAGTCTCACGGAGGATGAGGGTCGGGATTGAAGATATTTGGAGGTCGTC