Contig 009505:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF042K09-                                      GCTGGGATTTTGTCAAATACAAAACTATACAT
                      ____________________________________________________________
consensus                                         GCTGGGATTTTGTCAAATACAAAACTATACAT
 
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rJMSF042K09-          AATCTTTACCTTCAAATGCACATAAAAAAAGTGAACACAAGTTAAGCATTCTGTGTCTTT
                      ____________________________________________________________
consensus             AATCTTTACCTTCAAATGCACATAAAAAAAGTGAACACAAGTTAAGCATTCTGTGTCTTT
 
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rJMSF042K09-          AGAACTCAACTTGTCAAGGCTGTCATCTCTGCATTCATGTAGTTGGGCAAAGATTCTTTG
                      ____________________________________________________________
consensus             AGAACTCAACTTGTCAAGGCTGTCATCTCTGCATTCATGTAGTTGGGCAAAGATTCTTTG
 
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rJMSF042K09-          CTGCTTCTAAAGTCGTGATTCTGTATCTTAGAATGCACGAAGATAACCCGTGTTCAGAGC
                      ____________________________________________________________
consensus             CTGCTTCTAAAGTCGTGATTCTGTATCTTAGAATGCACGAAGATAACCCGTGTTCAGAGC
 
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rJMSF042K09-          CCAGCAATCTGGTGCAAATGATTCAATGAAGATTTATGAACTATAAGCTCCACCAATGAT
                      ____________________________________________________________
consensus             CCAGCAATCTGGTGCAAATGATTCAATGAAGATTTATGAACTATAAGCTCCACCAATGAT
 
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rJMSF042K09-          ATACCTTCAATAGAAACCAAAACATTTGTTATGAGAACAAGCAATGAAACCATAGATAAC
                      ____________________________________________________________
consensus             ATACCTTCAATAGAAACCAAAACATTTGTTATGAGAACAAGCAATGAAACCATAGATAAC
 
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rJMSF042K09-          CCATAGGAAACCGAGTTTACTAACCAAATAACTAAACAACAAAATCGAGCAATCACTAGA
                      ____________________________________________________________
consensus             CCATAGGAAACCGAGTTTACTAACCAAATAACTAAACAACAAAATCGAGCAATCACTAGA
 
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rJMSF042K09-          TCGTGGCATTCCTTTGTGCCACTCGGGCCTTCTCGGCATCAATGATGGCCTCGACCAACT
                      ____________________________________________________________
consensus             TCGTGGCATTCCTTTGTGCCACTCGGGCCTTCTCGGCATCAATGATGGCCTCGACCAACT
 
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rJMSF042K09-          TAACCGAACTCTCCAACTCCCCTTCTCGGTTCACAACAACATAATCGAAGCTCTTCATAT
                      ____________________________________________________________
consensus             TAACCGAACTCTCCAACTCCCCTTCTCGGTTCACAACAACATAATCGAAGCTCTTCATAT
 
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rJMSF042K09-          GCCTCACCTCCTCCCGAGCTGTGGCAATTCTCACAAGCAAAGTCTCCCTCGTCTCCGTCT
                      ____________________________________________________________
consensus             GCCTCACCTCCTCCCGAGCTGTGGCAATTCTCACAAGCAAAGTCTCCCTCGTCTCCGTCT
 
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rJMSF042K09-          TCCTATCTATCAACCTCTTAACGAGCGCTTCCTCGCTCTCCGCTACCAAGAACACAAACA
                      ____________________________________________________________
consensus             TCCTATCTATCAACCTCTTAACGAGCGCTTCCTCGCTCTCCGCTACCAAGAACACAAACA
 
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rJMSF042K09-          CTGCAGCGTTCCCGAGGATCTTCCTCAGAGTTGCAGCTCCTTGAATATCCACTCTCAACA
JMSF042K09+                                                                CTCAACA
                      ____________________________________________________________
consensus             CTGCAGCGTTCCCGAGGATCTTCCTCAGAGTTGCAGCTCCTTGAATATCCACTCTCAACA
 
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rJMSF042K09-          CAATGTCACACCCTTTAGCCATGAAATCCCTAATCTGCTGTTTCGGGATACCCTTATAAT
JMSF042K09+           CAATGTCACACCCTTTAGCCATGAAATCCCTAATCTGCTGTTTCGGGATACCCTTATAAT
                      ____________________________________________________________
consensus             CAATGTCACACCCTTTAGCCATGAAATCCCTAATCTGCTGTTTCGGGATACCCTTATAAT
 
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rJMSF042K09-          CCCCATACACCAATGCATACTCCAAAAGCTCATCCCTTTCAATCATGGACACAAATTCCT
JMSF042K09+           CCCCATACACCAATGCATACTCCAAAAGCTCATCCCTTTCAATCATGGACACAAATTCCT
                      ____________________________________________________________
consensus             CCCCATACACCAATGCATACTCCAAAAGCTCATCCCTTTCAATCATGGACACAAATTCCT
 
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rJMSF042K09-          CTTTGCTCATAAAGTAGT                                          
JMSF042K09+           CTTTGCTCATAAAGTAGTAATCTTTCCCATCTTCCTCACCAGCCCGCTTTTCGCGGCTTG
                      ____________________________________________________________
consensus             CTTTGCTCATAAAGTAGTAATCTTTCCCATCTTCCTCACCAGCCCGCTTTTCGCGGCTTG
 
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JMSF042K09+           TGGCCGTGACAACAAAATGAATGTTTTCTTTAACTTCTCGCAAACGTTTGATCACTGCGT
                      ____________________________________________________________
consensus             TGGCCGTGACAACAAAATGAATGTTTTCTTTAACTTCTCGCAAACGTTTGATCACTGCGT
 
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JMSF042K09+           CCTTGCCAACCCCACTAGGCCCACTGATCACCACGATTAAAGGGTTAGGGTTTGGGGCCA
                      ____________________________________________________________
consensus             CCTTGCCAACCCCACTAGGCCCACTGATCACCACGATTAAAGGGTTAGGGTTTGGGGCCA
 
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JMSF042K09+           ACGGGTCGGAGCTAAAGGGCGACCCTAAAGCGGCCTCAAGGGCACGAATCACCTCGGCCT
                      ____________________________________________________________
consensus             ACGGGTCGGAGCTAAAGGGCGACCCTAAAGCGGCCTCAAGGGCACGAATCACCTCGGCCT
 
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JMSF042K09+           TGTTGGCTGTATCCGGCGAAGGAATAGGCACCGCTTCTGGGCGTCTGGCGTAACTCATTC
                      ____________________________________________________________
consensus             TGTTGGCTGTATCCGGCGAAGGAATAGGCACCGCTTCTGGGCGTCTGGCGTAACTCATTC
 
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JMSF042K09+           GTGAAGTGTACGAAATGCGGCGGTGGGTCGCCGGACTTGGCGGCGGAAACCGCTGCTTCG
                      ____________________________________________________________
consensus             GTGAAGTGTACGAAATGCGGCGGTGGGTCGCCGGACTTGGCGGCGGAAACCGCTGCTTCG
 
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JMSF042K09+           AGATCCTTGGTACGGGCAGAGACTTCGGGTTCCGCTCGAAAACGGCAAAAGGGTTTGTGA
                      ____________________________________________________________
consensus             AGATCCTTGGTACGGGCAGAGACTTCGGGTTCCGCTCGAAAACGGCAAAAGGGTTTGTGA
 
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JMSF042K09+           AATTCCGGGGGAGGAGAAATGGGTTGTGGTTAGAAGTTGCTAACAATGTGCAGAGCCTTC
                      ____________________________________________________________
consensus             AATTCCGGGGGAGGAGAAATGGGTTGTGGTTAGAAGTTGCTAACAATGTGCAGAGCCTTC
 
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JMSF042K09+           GATATAGCATCGAGATTTACAGGGGGTGACAAAAGGGGGATTTGGTTTTTAGGGGATGTA
                      ____________________________________________________________
consensus             GATATAGCATCGAGATTTACAGGGGGTGACAAAAGGGGGATTTGGTTTTTAGGGGATGTA
 
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JMSF042K09+           GTAGGGATTTGAAGAACGTGTTGGAGGAAGATTACAAAGTGACCGCGAAAACTTGCCGGC
                      ____________________________________________________________
consensus             GTAGGGATTTGAAGAACGTGTTGGAGGAAGATTACAAAGTGACCGCGAAAACTTGCCGGC
 
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JMSF042K09+           TCAATGGAGAATTTCAGAATAGTATGTTGGAATGGGGACTAATTTCAATTTTCGACGATC
                      ____________________________________________________________
consensus             TCAATGGAGAATTTCAGAATAGTATGTTGGAATGGGGACTAATTTCAATTTTCGACGATC