| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN028P23 | Sequence | 583 | 009504 (6) | ref|XP_011075202.1| | 3e-54 | PREDICTED: small nuclear ribonucleoprotein E-like [Sesamum indicum] ref|XP_01109 | |||||
| JMFN031C20 | Sequence | 591 | 009504 (6) | ref|XP_011075202.1| | 3e-54 | PREDICTED: small nuclear ribonucleoprotein E-like [Sesamum indicum] ref|XP_01109 | |||||
| JMFN039H09 | Sequence | 599 | 009504 (6) | ref|XP_011075202.1| | 2e-54 | PREDICTED: small nuclear ribonucleoprotein E-like [Sesamum indicum] ref|XP_01109 | |||||
| JMSF009C20 | Sequence | 386 | 006786 (8) | 529 | 009504 (6) | ref|XP_011075202.1| | 2e-54 | PREDICTED: small nuclear ribonucleoprotein E-like [Sesamum indicum] ref|XP_01109 | |||
| JMSF042I10 | Sequence | 692 | 009504 (6) | ref|XP_011075202.1| | 1e-53 | PREDICTED: small nuclear ribonucleoprotein E-like [Sesamum indicum] ref|XP_01109 | 649 | 009504 (6) | ref|XP_011075202.1| | 6e-54 | PREDICTED: small nuclear ribonucleoprotein E-like [Sesamum indicum] ref|XP_01109 |
This contig is upended
. : . : . : . : . : . :
JMFN039H09+ GGCTCCAACTTGGTTGATATAA
JMFN031C20+ TAA
JMFN028P23+ GGCTCCAACTTGGTTGATATAA
JMSF042I10+ TTTTTTTTTTGGCTCCAACTTGGTTGATATAA
____________________________________________________________
consensus TTTTTTTTTTGGCTCCAACTTGGTTGATATAA
. : . : . : . : . : . :
rJMSF042I10- GCATCATTTTGTGGCTAAGTATACAAC
JMFN039H09+ TAGAGGTAAATGGTAAACTTCAGTTCAAACCATGCATCATTTTGTGGCTAAGTATACAAC
JMFN031C20+ TAGAGGTAAATGGTAAACTTCAGTTCAAACCATGCATCATTTTGTGGCTAAGTATACAAC
JMFN028P23+ TAGAGGTAAATGGTAAACTTCAGTTCAAACCATGCATCATTTTGTGGCTAAGTATACAAC
JMSF042I10+ TAGAGGTAAATGGTAAACTTCAGTTCAAACCATGCATCATTTTGTGGCTAAGTATACAAC
____________________________________________________________
consensus TAGAGGTAAATGGTAAACTTCAGTTCAAACCATGCATCATTTTGTGGCTAAGTATACAAC
. : . : . : . : . : . :
rJMSF042I10- AACTGGAACAAGATCAATGAAAATGCTACACATCAAAGATAGAACTCTGGCATCTCATAT
JMFN039H09+ AACTGGAACAAGATCAATGAAAATGCTACACATCAAAGATAGAACTCTGGCATCTCATAT
JMFN031C20+ AACTGGAACAAGATCAATGAAAATGCTACACATCAAAGATAGAACTCTGGCATCTCATAT
JMFN028P23+ AACTGGAACAAGATCAATGAAAATGCTACACATCAAAGATAGAACTCTGGCATCTCATAT
rJMSF009C20- TGCTACACATCAAAGATAGAACTCTGGCATCTCATAT
JMSF042I10+ AACTGGAACAAGATCAATGAAAATGCTACACATCAAAGATAGAACTCTGGCATCTCATAT
____________________________________________________________
consensus AACTGGAACAAGATCAATGAAAATGCTACACATCAAAGATAGAACTCTGGCATCTCATAT
. : . : . : . : . : . :
rJMSF042I10- ACTACTCAATCCCTAGAATACATTGGTTATAATAGTTGGAAGTTCAAAGGATTTCCAAGC
JMFN039H09+ ACTACTCAATCCCTAGAATACATTGGTTATAATAGTTGGAAGTTCAAAGGATTTCCAAGC
JMFN031C20+ ACTACTCAATCCCTAGAATACATTGGTTATAATAGTTGGAAGTTCAAAGGATTTCCAAGC
JMFN028P23+ ACTACTCAATCCCTAGAATACATTGGTTATAATAGTTGGAAGTTCAAAGGATTTCCAAGC
rJMSF009C20- ACTACTCAATCCCTAGAATACATTGGTTATAATAGTTGGAAGTTCAAAGGATTTCCAAGC
JMSF042I10+ ACTACTCAATCCCTAGAATACATTGGTTATAATAGTTGGAAGTTCAAAGGATTTCCAAGC
____________________________________________________________
consensus ACTACTCAATCCCTAGAATACATTGGTTATAATAGTTGGAAGTTCAAAGGATTTCCAAGC
. : . : . : . : . : . :
rJMSF042I10- GACCGATAATATGCATTTGAAATATGCTGCTGAGATCCAAATCGCCATCCACGATGTTAC
JMFN039H09+ GACCGATAATATGCATTTGAAATATGCTGCTGAGATCCAAATCGCCATCCACGATGTTAC
JMFN031C20+ GACCGATAATATGCATTTGAAATATGCTGCTGAGATCCAAATCGCCATCCACGATGTTAC
JMFN028P23+ GACCGATAATATGCATTTGAAATATGCTGCTGAGATCCAAATCGCCATCCACGATGTTAC
rJMSF009C20- GACCGATAATATGCATTTGAAATATGCTGCTGAGATCCAAATCGCCATCCACGATGTTAC
JMSF042I10+ GACCGATAATATGCATTTGAAATATGCTGCTGAGATCCAAATCGCCATCCACGATGTTAC
____________________________________________________________
consensus GACCGATAATATGCATTTGAAATATGCTGCTGAGATCCAAATCGCCATCCACGATGTTAC
. : . : . : . : . : . :
rJMSF042I10- TTCCCCGTGTTCATCATCAGGGTGATATTGTCCCCTTTTAGAAGAATGCGACCCAATTGC
JMFN039H09+ TTCCCCGTGTTCATCATCAGGGTGATATTGTCCCCTTTTAGAAGAATGCGACCCAATTGC
JMFN031C20+ TTCCCCGTGTTCATCATCAGGGTGATATTGTCCCCTTTTAGAAGAATGCGACCCAATTGC
JMFN028P23+ TTCCCCGTGTTCATCATCAGGGTGATATTGTCCCCTTTTAGAAGAATGCGACCCAATTGC
rJMSF009C20- TTCCCCGTGTTCATCATCAGGGTGATATTGTCCCCTTTTAGAAGAATGCGACCCAATTGC
JMSF042I10+ TTCCCCGTGTTCATCATCAGGGTGATATTGTCCCCTTTTAGAAGAATGCGACCCAATTGC
____________________________________________________________
consensus TTCCCCGTGTTCATCATCAGGGTGATATTGTCCCCTTTTAGAAGAATGCGACCCAATTGC
. : . : . : . : . : . :
rJMSF042I10- TTTCTGCTATTCTTCTTTACATTGACTTCCTCAGCATCATCCAAAACCAAATTCATGTAC
JMFN039H09+ TTTCTGCTATTCTTCTTTACATTGACTTCCTCAGCATCATCCAAAACCAAATTCATGTAC
JMFN031C20+ TTTCTGCTATTCTTCTTTACATTGACTTCCTCAGCATCATCCAAAACCAAATTCATGTAC
JMFN028P23+ TTTCTGCTATTCTTCTTTACATTGACTTCCTCAGCATCATCCAAAACCAAATTCATGTAC
rJMSF009C20- TTTCTGCTATTCTTCTTTACATTGACTTCCTCAGCATCATCCAAAACCAAATTCATGTAC
JMSF042I10+ TTTCTGCTATTCTTCTTTACATTGACTTCCTCAGCATCATCCAAAACCAAATTCATGTAC
____________________________________________________________
consensus TTTCTGCTATTCTTCTTTACATTGACTTCCTCAGCATCATCCAAAACCAAATTCATGTAC
. : . : . : . : . : . :
rJMSF042I10- TCATCAAACCCAATAATGCGGCCTTCAATCCTCAGATCCTTCTGCTCAAAAAGCCAAATC
JMFN039H09+ TCATCAAACCCAATAATGCGGCCTTCAATCCTCAGATCCTTCTGCTCAAAAAGCCAAATC
JMFN031C20+ TCATCAAACCCAATAATGCGGCCTTCAATCCTCAGATCCTTCTGCTCAAAAAGCCAAATC
JMFN028P23+ TCATCAAACCCAATAATGCGGCCTTCAATCCTCAGATCCTTCTGCTCAAAAAGCCAAATC
rJMSF009C20- TCATCAAACCCAATAATGCGGCCTTCAATCCTCAGATCCTTCTGCTCAAAAAGCCAAATC
JMSF042I10+ TCATCAAACCCAATAATGCGGCCTTCAATCCTCAGATCCTTCTGCTCAAAAAGCCAAATC
____________________________________________________________
consensus TCATCAAACCCAATAATGCGGCCTTCAATCCTCAGATCCTTCTGCTCAAAAAGCCAAATC
. : . : . : . : . : . :
rJMSF042I10- TGAATTCGAGCTTTACTCTGAAGAAACCTGAATATCAGATTAATGGGCTGGGTCATAATC
JMFN039H09+ TGAATTCGAGCTTTACTCTGAAGAAACCTGAATATCAGATTAATGGGCTGGGTCATAATC
JMFN031C20+ TGAATTCGAGCTTTACTCTGAAGAAACCTGAATATCAGATTAATGGGCTGGGTCATAATC
JMFN028P23+ TGAATTCGAGCTTTACTCTGAAGAAACCTGAATATCAGATTAATGGGCTGGGTCATAATC
rJMSF009C20- TGAATTCGAGCTTTACTCTGAAGAAACCTGAATATCAGATTAATGGGCTGGGTCATAATC
JMSF042I10+ TGAATTCGAGCTTTACTCTGAAGAAACCTGAATATCAGATTAATGGGCTGGGTCATAATC
____________________________________________________________
consensus TGAATTCGAGCTTTACTCTGAAGAAACCTGAATATCAGATTAATGGGCTGGGTCATAATC
. : . : . : . : . : . :
rJMSF042I10- CTCTGAACTTTCGTGCTCGCCATGGCTGCTGCTTGTTCTCTGCTACTGAAAATCTCGCTT
JMFN039H09+ CTCTGAACTTTCGTGCTCGCCATGGCTGCTGCTTGTTCTCTGCTACTGAAAATCTCGCTT
JMFN031C20+ CTCTGAACTTTCGTGCTCGCCATGGCTGCTGCTTGTTCTCTGCTACTGAAAATCTCGCTT
JMFN028P23+ CTCTGAACTTTCGTGCTCGCCATGGCTGCTGCTTGTTCTCTGCTACTGAAAATCTCGCTT
rJMSF009C20- CTCTGAACTTTCGTGCTCGCCATGGCTGCTGCTTGTTCTCTGCTACTGAAAATCTCGCTT
JMSF042I10+ CTCTGAACTTTCGTGCTCGCCATGGCTGCTGCTTGTTCTCTGCTACTGAAAATCTCGCTT
____________________________________________________________
consensus CTCTGAACTTTCGTGCTCGCCATGGCTGCTGCTTGTTCTCTGCTACTGAAAATCTCGCTT
. : . : . : . : . : . :
rJMSF042I10- CTATTCCTTCTTCCCTGAGTCGCAAGAGAGCAGCAAAACCCTAACTGGCGAAGTGTTTGT
JMFN039H09+ CTATTCCTTCTTCCCTGAGTCGCAAGAGAGCAGCAAA
JMFN031C20+ CTATTCCTTCTTCCCTGAGTCGCAAGAGAGCAGCAAAACCCTAA
JMFN028P23+ CTATTCCTTCTTCCCTGAGTC
rJMSF009C20- CTATTCCTTCTTCCCTGAGTCGCAAGAGAGCAGCAAAACCCTAACTGGCGAAGTGTTTGT
JMSF042I10+ CTATTCCTTCTTCCCTGAGTCGCAAGAGAGCAGCAAAACCCTAACTGGCGAAGTGTTTGT
____________________________________________________________
consensus CTATTCCTTCTTCCCTGAGTCGCAAGAGAGCAGCAAAACCCTAACTGGCGAAGTGTTTGT
. : . : . : . : . : . :
rJMSF042I10- TAAAAGCCCTACGGTCACTGATACGCACTGCTATTCTACACTTACAGCTGCTAACCCCCC
rJMSF009C20- TAAAAGCCCT
JMSF042I10+ TAAAAGCCCTACGGTCACTGATACGCACTGCTATTCTACACTTACAGCTGCTAACCCCCC
____________________________________________________________
consensus TAAAAGCCCTACGGTCACTGATACGCACTGCTATTCTACACTTACAGCTGCTAACCCCCC