Contig 009485:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039P23Sequence691009485 (2)ref|XP_011078840.1|4e-86PREDICTED: UBP1-associated protein 2C-like isoform X1 [Sesamum indicum]852009485 (2)ref|XP_011078841.1|2e-45PREDICTED: UBP1-associated protein 2A-like isoform X2 [Sesamum indicum]

Alignment

This contig is upended


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rJMSF039P23-              TCATTGGCAGTGTTGACATCTATGATCTACCATCAAAAGCTTTCAGATAAACTTAT
                      ____________________________________________________________
consensus                 TCATTGGCAGTGTTGACATCTATGATCTACCATCAAAAGCTTTCAGATAAACTTAT
 
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rJMSF039P23-          TTCCTACTACTAAGAATTGCCTCACTAAATCCAGCTATTTAAAGAAGTTTGCATCCTCTC
                      ____________________________________________________________
consensus             TTCCTACTACTAAGAATTGCCTCACTAAATCCAGCTATTTAAAGAAGTTTGCATCCTCTC
 
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rJMSF039P23-          ATGGGCAAGTATTCTAAAATGATACACCTACAGAAGATGAATAATGATATGAGATATCTT
                      ____________________________________________________________
consensus             ATGGGCAAGTATTCTAAAATGATACACCTACAGAAGATGAATAATGATATGAGATATCTT
 
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rJMSF039P23-          TAACATCCATCGTTTGTCAAATCCTCGGTTATTGCTTTGGCATGTAGTATGGATAACCCC
                      ____________________________________________________________
consensus             TAACATCCATCGTTTGTCAAATCCTCGGTTATTGCTTTGGCATGTAGTATGGATAACCCC
 
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rJMSF039P23-          CGAATGAGGGAAGCGTTGGAGGAGGATCTCTCATAGCAGCATATTGAGGATATGGAATTT
                      ____________________________________________________________
consensus             CGAATGAGGGAAGCGTTGGAGGAGGATCTCTCATAGCAGCATATTGAGGATATGGAATTT
 
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rJMSF039P23-          GAGGTTGCACGGGATATGGAGAAGGTGCAGCTGGTGGACTTAAATATGTGGCATTTGGGT
                      ____________________________________________________________
consensus             GAGGTTGCACGGGATATGGAGAAGGTGCAGCTGGTGGACTTAAATATGTGGCATTTGGGT
 
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rJMSF039P23-          ATGCGGCCATAGACTGAGGATAAGTGTAGCCAACAGGAGTTTCAGAGCCAGGTGGTTTTT
                      ____________________________________________________________
consensus             ATGCGGCCATAGACTGAGGATAAGTGTAGCCAACAGGAGTTTCAGAGCCAGGTGGTTTTT
 
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rJMSF039P23-          GAGTTTGCAGGTATCCAGGCGTCATCGCTAATGGTACTGGAACCATTGATGCTGGTGCCT
                      ____________________________________________________________
consensus             GAGTTTGCAGGTATCCAGGCGTCATCGCTAATGGTACTGGAACCATTGATGCTGGTGCCT
 
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rJMSF039P23-          GTACTTGAGTTACCTTGCCCTTGTAGTTGTCGGCAAGTTTCACGGTAATATTCCTACCCC
JMSF039P23+                                       GTCGGCAAGTTTCACGGTAATATTCCTACCCC
                      ____________________________________________________________
consensus             GTACTTGAGTTACCTTGCCCTTGTAGTTGTCGGCAAGTTTCACGGTAATATTCCTACCCC
 
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rJMSF039P23-          CGAGTATCCTTTGTGGATCATCTATAGCTTTCTTTGCGGACTCCACTGTTTTATAGGTGA
JMSF039P23+           CGAGTATCCTTTGTGGATCATCTATAGCTTTCTTTGCGGACTCCACTGTTTTATAGGTGA
                      ____________________________________________________________
consensus             CGAGTATCCTTTGTGGATCATCTATAGCTTTCTTTGCGGACTCCACTGTTTTATAGGTGA
 
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rJMSF039P23-          CAAAACCAAAACCACTACAAGCAACAAATGCATACTAGTTAGACATGATGCAAAATGGGC
JMSF039P23+           CAAAACCAAAACCACTACAAGCAACAAATGCATACTAGTTAGACATGATGCAAAATGGGC
                      ____________________________________________________________
consensus             CAAAACCAAAACCACTACAAGCAACAAATGCATACTAGTTAGACATGATGCAAAATGGGC
 
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rJMSF039P23-          TTGTCTATCTACAAGCAAGATGTTGATAATGTTACCGAGATTTGTCTGTATCTTTGTCAT
JMSF039P23+           TTGTCTATCTACAAGCAAGATGTTGATAATGTTACCGAGATTTGTCTGTATCTTTGTCAT
                      ____________________________________________________________
consensus             TTGTCTATCTACAAGCAAGATGTTGATAATGTTACCGAGATTTGTCTGTATCTTTGTCAT
 
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rJMSF039P23-          ATGCAACTGAACCCTCCTCTATATCACCGTGNCCTTCTGAAAAAGTTGAGCAGCATCTCA
JMSF039P23+           ATGCAACTGAACCCTCCTCTATATCACCGTG-CCTTCTGAAAAAGTTGAGCAGCATCTCA
                      ____________________________________________________________
consensus             ATGCAACTGAACCCTCCTCTATATCACCGTGNCCTTCTGAAAAAGTTGAGCAGCATCTCA
 
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rJMSF039P23-          GTAGTTGTGTCTGGTGATAAACCCCCAACGTANAGCTTCCTCTGGGCTTGGTCAGGTGTA
JMSF039P23+           GTAGTTGTGTCTGGTGATAAACCCCCAACGTAGAGCTTCCTCTGGGCTTGGTCAGGTGTA
                      ____________________________________________________________
consensus             GTAGTTGTGTCTGGTGATAAACCCCCAACGTAGAGCTTCCTCTGGGCTTGGTCAGGTGTA
 
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rJMSF039P23-          ATACTAGAGCTGCTTA                                            
JMSF039P23+           ATACTAGAGCTGCTTAAGCCTTCAGATGCCAGGTTACAAACTGCCATGCGACCATCAATC
                      ____________________________________________________________
consensus             ATACTAGAGCTGCTTAAGCCTTCAGATGCCAGGTTACAAACTGCCATGCGACCATCAATC
 
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JMSF039P23+           ATTTTGCTAGGTGCTTTTAGAGCTCTCTGAGCTGATTCCATGTCTTTAAAGGTAATAAAT
                      ____________________________________________________________
consensus             ATTTTGCTAGGTGCTTTTAGAGCTCTCTGAGCTGATTCCATGTCTTTAAAGGTAATAAAT
 
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JMSF039P23+           CCATAGCCACGAGATTTTCCAGTTGCTTTGTCAGCAATGACTGCACCCTCCTCAATTTCA
                      ____________________________________________________________
consensus             CCATAGCCACGAGATTTTCCAGTTGCTTTGTCAGCAATGACTGCACCCTCCTCAATTTCA
 
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JMSF039P23+           CCATGCTCTTCAAAAGCAGCTTAGCGAGGAGATCAACGAGCTGCGGTTTGGGTAGCGGGT
                      ____________________________________________________________
consensus             CCATGCTCTTCAAAAGCAGCTTAGCGAGGAGATCAACGAGCTGCGGTTTGGGTAGCGGGT
 
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JMSF039P23+           CAAGCAGAGAGCGTAATTCTTCGGCTGCTGGAGGTGAAATGTTTGAATCCACTTCGCCAT
                      ____________________________________________________________
consensus             CAAGCAGAGAGCGTAATTCTTCGGCTGCTGGAGGTGAAATGTTTGAATCCACTTCGCCAT
 
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JMSF039P23+           TCCATGCACCTTCGTCTAGCTTCCTCTTCTTCACTTCCTCCATCTCCACACACTCTCTCC
                      ____________________________________________________________
consensus             TCCATGCACCTTCGTCTAGCTTCCTCTTCTTCACTTCCTCCATCTCCACACACTCTCTCC