Contig 009484:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF027N16+                                                      ATCTTACATTATCATGG
                      ____________________________________________________________
consensus                                                        ATCTTACATTATCATGG
 
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JMSF027N16+           TTAGTATAAGTATCTGCATATGAGAGGTCGCCAACAAACAGAACTGTTTGCCCCTTTCTT
                      ____________________________________________________________
consensus             TTAGTATAAGTATCTGCATATGAGAGGTCGCCAACAAACAGAACTGTTTGCCCCTTTCTT
 
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JMSF027N16+           GGATTTAATTCATAATGTGTGAGTGTCCGGTTTGAGGCAAAACTCTGTCCAAGATCCCCT
                      ____________________________________________________________
consensus             GGATTTAATTCATAATGTGTGAGTGTCCGGTTTGAGGCAAAACTCTGTCCAAGATCCCCT
 
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JMSF027N16+           ATAAGACCAAACGTATAGGGAACATCAGGCCCAACTTCAGGAGGTGTCATGAACCAGAAG
                      ____________________________________________________________
consensus             ATAAGACCAAACGTATAGGGAACATCAGGCCCAACTTCAGGAGGTGTCATGAACCAGAAG
 
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JMSF027N16+           GTTCGAGTCGTGTTCCCAATCCCCACCTCATAGTAGTATTTGGTGTTGTACTCAAGATCC
JMSF039L24+                                                                 AGATTC
                      ____________________________________________________________
consensus             GTTCGAGTCGTGTTCCCAATCCCCACCTCATAGTAGTATTTGGTGTTGTACTCAAGATTC
 
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JMSF027N16+           CTAATGGTGCAATGGTGAATGTAACCCGAAGTATAAGTGAAGTATTTATAGGTTTTCATT
JMSF039L24+           CTAATGGTGCAGTGGTGAATGTAACCAGAAGTATAATTGAAGTATCTATAGGTTCTAATA
                      ____________________________________________________________
consensus             CTAATGGTGCAGTGGTGAATGTAACCCGAAGTATAATTGAAGTATTTATAGGTTTTCATT
 
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JMSF027N16+           TTTCCTTTGGCCTC-TTCTTGTGTTTGCTGTTCTCACTCCAGTACAGCACTGTATTCGAA
JMSF039L24+           TTCCCTTTGGCCACTTTCTTGTGTTTGCTATTCTCACTCCAGTACAGGACTTTACTCGAA
                      ____________________________________________________________
consensus             TTTCCTTTGGCCTCTTTCTTGTGTTTGCTGTTCTCACTCCAGTACAGGACTTTATTCGAA
 
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JMSF027N16+           CCCGGTTCATCCACAGTCACCCATGAAACAATCATTGCTTTCCCCGCAACATCTCCTTGT
JMSF039L24+           CCCGGTTCATCCACAGTCACCCATGACACAATCATTCCTTTCCCCACATGATCTCCTTGT
                      ____________________________________________________________
consensus             CCCGGTTCATCCACAGTCACCCATGACACAATCATTGCTTTCCCCGCATGATCTCCTTGT
 
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JMSF027N16+           GTGATATGAACCTGTTGAGGCGCATTATATCCGGGAGGCACGCGGAAGACATCACTGTCG
JMSF039L24+           GTGATATGAACCTGTTGAGGCGCATTATATCCAGGCGGCACGCGGAAGACATCACTGTCG
                      ____________________________________________________________
consensus             GTGATATGAACCTGTTGAGGCGCATTATATCCGGGCGGCACGCGGAAGACATCACTGTCG
 
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JMSF027N16+           AGCGGCATATCCGCACTTTTCTCGACCTTCCGAACATAACTGCTGCTGATTCCGGCGCTG
JMSF039L24+           AGCGGCATATCCACAGTTTTCTCCACCTTCCGGACAAAGCTGCTGGTGGTTCCGGCGCTG
                      ____________________________________________________________
consensus             AGCGGCATATCCGCAGTTTTCTCGACCTTCCGGACATAGCTGCTGGTGGTTCCGGCGCTG
 
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JMSF027N16+           CACAGAATGGCGGCACTGAGAACC                                    
JMSF039L24+           CACAGAACGGCGGCATTGAGAACCGCCGCCAAAACAACCGCGAGCGCGTAGCATCCACCC
                      ____________________________________________________________
consensus             CACAGAATGGCGGCATTGAGAACCGCCGCCAAAACAACCGCGAGCGCGTAGCATCCACCC
 
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JMSF018E19+                          CGCAGCGCACAAAGCTCAACCCTGTCTGAGTGTCTGTCCCTGAGC
JMSF039L24+           ATCTTTCTCGTCATTCGCAGCGCACAAAGCTCAACCCTGTCTGAGTGTCTGTCCCTGAGC
                      ____________________________________________________________
consensus             ATCTTTCTCGTCATTCGCAGCGCACAAAGCTCAACCCTGTCTGAGTGTCTGTCCCTGAGC
 
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JMSF018E19+           AGCACACCTGTGTATATATACACCGTATAATACTATTGTAATACCGGCGCGAGCGGGAAA
JMSF039L24+           AGCACACCTGTGTATATATACACCGTATAATACTATTGTAATACCGGCGCGAGCGGGAAA
                      ____________________________________________________________
consensus             AGCACACCTGTGTATATATACACCGTATAATACTATTGTAATACCGGCGCGAGCGGGAAA
 
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JMSF018E19+           TACGGGGAATATCCAAGATTAATATACGAATATGCAGTCCAGTGTCAACAGCTGGAGCGT
JMSF039L24+           TACGGGGAATATCCAAGATTAATATACGAATATGCAGTCCAGTGTCAACAGCTGGAGCGT
                      ____________________________________________________________
consensus             TACGGGGAATATCCAAGATTAATATACGAATATGCAGTCCAGTGTCAACAGCTGGAGCGT
 
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JMSF018E19+           GTTCGGCACGGATTGAGCTCTGTGTCTTGTGATTTGTGAAGGCAGTGTGGAAAGCAT   
JMSF039L24+           GTTCGGCACGGATTGAGCTCTGTGTCTTGTGATTTGTGAAGGCAGTGTGGAAAGCATACT
                      ____________________________________________________________
consensus             GTTCGGCACGGATTGAGCTCTGTGTCTTGTGATTTGTGAAGGCAGTGTGGAAAGCATACT
 
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JMSF039L24+           TTGCAGAAAATCGTATGAGATTTAAATACAGGGTTGACTGGTGAAGATTGCGGCACAGTC
                      ____________________________________________________________
consensus             TTGCAGAAAATCGTATGAGATTTAAATACAGGGTTGACTGGTGAAGATTGCGGCACAGTC