Contig 009477:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS023H06Sequence589009477 (4)ref|XP_009769856.1|266PREDICTED: uncharacterized protein LOC104220662 [Nicotiana sylvestris]
JMFS050C11Sequence545009477 (4)ref|XP_009769856.1|211PREDICTED: uncharacterized protein LOC104220662 [Nicotiana sylvestris]
JMFS107E11Sequence627009477 (4)ref|XP_009769856.1|234PREDICTED: uncharacterized protein LOC104220662 [Nicotiana sylvestris]
JMSF038J08Sequence366009477 (4)ref|XP_009769856.1|52.4PREDICTED: uncharacterized protein LOC104220662 [Nicotiana sylvestris]897001877 (3)ref|XP_009770953.1|209PREDICTED: uncharacterized protein LOC104221573, partial [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS023H06+                                     GTCCTCGTAAATTTGTTTCCAGCAGCGTCTGTAC
                      ____________________________________________________________
consensus                                       GTCCTCGTAAATTTGTTTCCAGCAGCGTCTGTAC
 
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JMFS023H06+           AGAAACTTTTACCCGTCACTATGGTCACCTTTCCAAATTGAGAACTTGTCGGCAAACTCA
JMFS107E11+                                                TTGAGAACTTGTCGGCAAACTCA
                      ____________________________________________________________
consensus             AGAAACTTTTACCCGTCACTATGGTCACCTTTCCAAATTGAGAACTTGTCGGCAAACTCA
 
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JMFS023H06+           CAACAATAGAAAATGTGAGGTTCGGGTGAATGACACGAAGTGTACTTGGCAAAACTTGGC
JMFS050C11+                                                AAGTGTACTTGGCAAAACTTGGC
JMFS107E11+           CAACAATAGAAAATGTGAGGTTCGGGTGAATGACACGAAGTGTACTTGGCAAAACTTGGC
                      ____________________________________________________________
consensus             CAACAATAGAAAATGTGAGGTTCGGGTGAATGACACGAAGTGTACTTGGCAAAACTTGGC
 
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JMFS023H06+           CCGAACCATAGACAATAAGATTGCACGAATTTACAGAGGGGCATCCAAAACCGCAAGGTT
JMFS050C11+           CCGAACCATAGACAATAAGATTGCACGAATTTACAGAGGGGCATCCAAAACCGCAAGGTT
JMFS107E11+           CCGAACCATAGACAATAAGATTGCACGAATTTACAGAGGGGCATCCAAAACCGCAAGGTT
                      ____________________________________________________________
consensus             CCGAACCATAGACAATAAGATTGCACGAATTTACAGAGGGGCATCCAAAACCGCAAGGTT
 
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JMFS023H06+           CGGTGAAGGATATATTTACGGTAATATTTGAAGCATTTGTAAAAGATGTTGGGGCCATAA
JMFS050C11+           CGGTGAAGGATATATTTACGGTAATATTTGAAGCATTTGTAAAAGATGTTGGGGCCATAA
JMFS107E11+           CGGTGAAGGATATATTTACGGTAATATTTGAAGCATTTGTAAAAGATGTTGGGGCCATAA
                      ____________________________________________________________
consensus             CGGTGAAGGATATATTTACGGTAATATTTGAAGCATTTGTAAAAGATGTTGGGGCCATAA
 
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JMFS023H06+           GGTAAGCTGTAGGGGGAACTGTGTCAACTGTCCAGTTGTGGCTAGCGCACCCAACGCCAC
JMFS050C11+           GGTAAGCTGTAGGGGGAACTGTGTCAACTGTCCAGTTGTGGCTAGCGCACCCAACGCCAC
JMFS107E11+           GGTAAGCTGTAGGGGGAACTGTGTCAACTGTCCAGTTGTGGCTAGCGCACCCAACGCCAC
                      ____________________________________________________________
consensus             GGTAAGCTGTAGGGGGAACTGTGTCAACTGTCCAGTTGTGGCTAGCGCACCCAACGCCAC
 
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JMFS023H06+           GAGACCCATTCGTGCAAGCTTCAAAGGTATGAAATCCATCCTGCAATGCTGCATAAGAAA
JMFS050C11+           GAGACCCATTCGTGCAAGCTTCAAAGGTATGAAATCCATCCTGCAATGCTGCATAAGAAA
JMFS107E11+           GAGACCCATTCGTGCAAGCTTCAAAGGTATGAAATCCATCCTGCAATGCTGCATAAGAAA
                      ____________________________________________________________
consensus             GAGACCCATTCGTGCAAGCTTCAAAGGTATGAAATCCATCCTGCAATGCTGCATAAGAAA
 
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JMFS023H06+           CCATCCCGCCATGACAATCCGAAGGTACGTGGTCATCCAGCTTGCAAGTTGTGGGACAAT
JMFS050C11+           CCATCCCGCCATGACAATCCGAAGGTACGTGGTCATCCAGCTTGCAAGTTGTGGGACAAT
JMFS107E11+           CCATCCCGCCATGACAATCCGAAGGTACGTGGTCATCCAGCTTGCAAGTTGTGGGACAAT
JMSF038J08+                                                                 GACAAT
                      ____________________________________________________________
consensus             CCATCCCGCCATGACAATCCGAAGGTACGTGGTCATCCAGCTTGCAAGTTGTGGGACAAT
 
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JMFS023H06+           CTTTACAAACATCACTGTTGTTGCCTCCAACCAAGACTTGAAAAACAAATTTGGTTGAAT
JMFS050C11+           CTTTACAAACATCACTGTTGTTGCCTCCAACCAAGACTTGAAAAACAAATTTGGTTGAAT
JMFS107E11+           CTTTACAAACATCACTGTTGTTGCCTCCAACCAAGACTTGAAAAACAAATTTGGTTGAAT
JMSF038J08+           CTTTACAAACATCNCTGTTGTNGCCTCCAACCAAGACTTGAAAAACAAATTTGGTTGAAT
                      ____________________________________________________________
consensus             CTTTACAAACATCACTGTTGTTGCCTCCAACCAAGACTTGAAAAACAAATTTGGTTGAAT
 
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JMFS023H06+           TTTGATTTGAAAAGGGTGAAGGGGTCTTCAAGAACCTAAGAGAGACCTCGGAAGCAGCAT
JMFS050C11+           TTTGATTTGAAAAGGGTGAAGGGGTCTTCAAGAACCTAAGAGAGACCTCGGAAGCAGCAN
JMFS107E11+           TTTGATTTGAAAAGGGTGAAGGGGTCTTCAAGAACCTAAGAGAGACCTCGGAAGCAGCAT
JMSF038J08+           TTTGATTTGAAAAGGGTGAAGGGGTCTTCAAGAACCTAAGAGAGACCTCGGAAGCAGCAT
                      ____________________________________________________________
consensus             TTTGATTTGAAAAGGGTGAAGGGGTCTTCAAGAACCTAAGAGAGACCTCGGAAGCAGCAT
 
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JMFS023H06+           TAGGTTGAGCTCTCA                                             
JMFS050C11+           TAGGTTGAGCTCTCAGACTCAAAACAAGACAAACCCAGCAAAGCAGAACCAACCATGAAC
JMFS107E11+           TAGGTTGAGCTCTCAGACTCAAAACAAGACAAACCCAGCAATGCAGAACCAACCATGAAC
JMSF038J08+           TAGGTTGAGCTCTCAGACTCAAAACAAGACAAACCCAGCAATGCAGAACCAACCATGAAC
                      ____________________________________________________________
consensus             TAGGTTGAGCTCTCAGACTCAAAACAAGACAAACCCAGCAATGCAGAACCAACCATGAAC
 
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JMFS050C11+           TCTTG                                                       
JMFS107E11+           TCTTGCTAAAAAATCCCATTTCAGCAAAAAATGGGATTTTTACATGTCTCAATTTTCAAC
JMSF038J08+           TCTTGCTAAAAAATCCCATTTCAGCAAAAAATGGGATTTTTACATGTCTCAATTTTCAAC
                      ____________________________________________________________
consensus             TCTTGCTAAAAAATCCCATTTCAGCAAAAAATGGGATTTTTACATGTCTCAATTTTCAAC
 
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JMFS107E11+           CAAA                                                        
JMSF038J08+           CAAATTTGCTCTTAGCTTGCATGGAGGTGTGGGATATGATTTGGAGAAATGGGATTTTAG
                      ____________________________________________________________
consensus             CAAATTTGCTCTTAGCTTGCATGGAGGTGTGGGATATGATTTGGAGAAATGGGATTTTAG
 
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JMSF038J08+           TGGCTGGTGAAGGCTGTGAGAGGATATAAGACATGAAACTGATAGTGCAACCGCAGTGCC
                      ____________________________________________________________
consensus             TGGCTGGTGAAGGCTGTGAGAGGATATAAGACATGAAACTGATAGTGCAACCGCAGTGCC