Contig 009459:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038O06Sequence525009459 (3)ref|XP_009589155.1|1e-21PREDICTED: probable beta-1,3-galactosyltransferase 6 [Nicotiana tomentosiformis500002648 (4)ref|XP_010104914.1|1e-66putative beta-1,3-galactosyltransferase 6 [Morus notabilis] gb|EXC02150.1| putat
JMFN045I21Sequence412009459 (3)ref|XP_009589155.1|1e-16PREDICTED: probable beta-1,3-galactosyltransferase 6 [Nicotiana tomentosiformis
JMSF036M04Sequence605009459 (3)ref|XP_009589155.1|2e-23PREDICTED: probable beta-1,3-galactosyltransferase 6 [Nicotiana tomentosiformis708002648 (4)ref|XP_007039333.1|7e-138Galactosyltransferase family protein isoform 2 [Theobroma cacao] gb|EOY23834.1|

Alignment

This contig is upended


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JMSF036M04+                                                                GTCTGCT
                      ____________________________________________________________
consensus                                                                  GTCTGCT
 
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JMSF036M04+           TGAGTAGCTCTGGCTGAAGCAAGCTGCATTTCCAGTGAAGATATTGTTTTATCCAATTCC
                      ____________________________________________________________
consensus             TGAGTAGCTCTGGCTGAAGCAAGCTGCATTTCCAGTGAAGATATTGTTTTATCCAATTCC
 
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JMFN045I21+                                          ATAGGATATCCCTTTCCTGAAAAGAAGCT
JMFF038O06+           ATGATCACGTCATGTGTTTNGGAAACTCGAGATAGGATATCCCTTTCCTGAAAAGAAGCT
JMSF036M04+           ATGATCACGTCATGTGTTTTGGAAACTCGAGATAGGATATCCCTTTCCTGAAAAGAAGCT
                      ____________________________________________________________
consensus             ATGATCACGTCATGTGTTTTGGAAACTCGAGATAGGATATCCCTTTCCTGAAAAGAAGCT
 
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JMFN045I21+           TCCTTTTGTTGGCACTTAGGAACAGGGAGCGAATCTCCTGAGTTGAGTTGTTTTGGAGAA
JMFF038O06+           TCCTTTTGTTGGCACTTAGGAACAGGGAGCGAATCTCCTGAGTTGAGTTGTTTTGGAGAA
JMSF036M04+           TCCTTTTGTTGGCACTTAGGAACAGGGAGCGAATCTCCTGAGTTGAGTTGTTTTGGAGAA
                      ____________________________________________________________
consensus             TCCTTTTGTTGGCACTTAGGAACAGGGAGCGAATCTCCTGAGTTGAGTTGTTTTGGAGAA
 
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JMFN045I21+           AAACCATGTGCTGTTTTGATGGGTCCATGAACTGACCACAACCTGTTAACAACAAGAACA
JMFF038O06+           AAACCATGTGCTGTTTTGATGGGTCCATGAACTGACCACAACCTGTTAACAACAAGAACA
JMSF036M04+           AAACCATGTGCTGTTTTGATGGGTCCATGAACTGACCACAACCTGTTA--AACAAGAACA
                      ____________________________________________________________
consensus             AAACCATGTGCTGTTTTGATGGGTCCATGAACTGACCACAACCTGTTAACAACAAGAACA
 
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JMFN045I21+           CCCAAGCAAAAGCTGGCAATGCAAAGCAAGAAGACCCATCTTGAAGATACACCCTGAGCC
JMFF038O06+           CCCAAGCAAAAGCTGGCAATGCAAAGCAAGAAGACCCATCTTGAAGATACACCCTGAGCC
JMSF036M04+           CCCAAGCAAAAGCTGGCAATGCAAAGCAAGAAGACCCATCTTGAAGATACACCCTGAGCC
                      ____________________________________________________________
consensus             CCCAAGCAAAAGCTGGCAATGCAAAGCAAGAAGACCCATCTTGAAGATACACCCTGAGCC
 
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JMFN045I21+           TTCCCGGACTTATACAGAGGCGGCCTAGTCCCCGGAATCAACCCCATTTTTACCAATCCA
JMFF038O06+           TTCCCGGACTTATACAGAGGCGGCCTAGTCCCCGGAATCAACCCCATTTTTACCAATCCA
JMSF036M04+           TTCCCGGACTTATACAGAGGCGGCCTAGTCCCCGGAATCAACCCCATTTTTACCAATCCA
                      ____________________________________________________________
consensus             TTCCCGGACTTATACAGAGGCGGCCTAGTCCCCGGAATCAACCCCATTTTTACCAATCCA
 
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JMFN045I21+           CACAGTACAACGCCTGAGACAAGAACCCAGCTCACAGCTGTACAAGTTTAACCGCTCCTT
JMFF038O06+           CACAGTACAACGCCTGAGACAAGAACCCAGCTCACAGCTGTACAAGTTTAACCGCTCCTT
JMSF036M04+           CACAGTACAACGCCTGAGACAAGAACCCAGCTCACAGCTGTACAAGTTTAACCGCTCCTT
                      ____________________________________________________________
consensus             CACAGTACAACGCCTGAGACAAGAACCCAGCTCACAGCTGTACAAGTTTAACCGCTCCTT
 
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JMFN045I21+           AAACCCCTTAAATTACAGCCATTAAACAAAAACAGGGAACTAATGGCTTCATTAAGCCCA
JMFF038O06+           AAACCCCTTAAATTACAGCCATTAAACAAAAACAGGGAACTAATGGCTTCATTAAGCCCA
JMSF036M04+           AAACCCCTTAAATTACAGCCATTAAACAAAAACAGGGAACTAATGGCTTCATTAAGCCCA
                      ____________________________________________________________
consensus             AAACCCCTTAAATTACAGCCATTAAACAAAAACAGGGAACTAATGGCTTCATTAAGCCCA
 
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JMFN045I21+           ACATTGAAGATGAAACACCGAAG                                     
JMFF038O06+           ACATTGAAGATGAAACACCGAAGAAGAAGAAAAAACGGTGGGGGGACGAAAAAGGAAGAA
JMSF036M04+           ACATTGAAGATGAAACACCGAAGAAGAAGAAAAAACGGTGGGGGGACGAAAAAGGAAGAA
                      ____________________________________________________________
consensus             ACATTGAAGATGAAACACCGAAGAAGAAGAAAAAACGGTGGGGGGACGAAAAAGGAAGAA
 
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JMFF038O06+           TCTTGATTCTATGCTACCACGTCTCGGAGCCAAAGTAGCAAAATT               
JMSF036M04+           TCTTGATTCTATGCTACCACGTCTCGGAGCCAAAGTAGCACAATTGAAAATGACTTCACC
                      ____________________________________________________________
consensus             TCTTGATTCTATGCTACCACGTCTCGGAGCCAAAGTAGCACAATTGAAAATGACTTCACC