Contig 009450:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF023I06+                                                               TAAGTGCT
                      ____________________________________________________________
consensus                                                                 TAAGTGCT
 
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JMSF023I06+           AGGGAGGTAGTACCGTTCTGATCTAGATCACTCATTTATCTTAGTACCGACTACGGAGAA
                      ____________________________________________________________
consensus             AGGGAGGTAGTACCGTTCTGATCTAGATCACTCATTTATCTTAGTACCGACTACGGAGAA
 
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JMSF023I06+           AAATAGCAATCAAAATAGCATTTCCTTGGTAAAGTTTTCAAGAATTTTCAATTAAACAAC
                      ____________________________________________________________
consensus             AAATAGCAATCAAAATAGCATTTCCTTGGTAAAGTTTTCAAGAATTTTCAATTAAACAAC
 
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JMSF023I06+           TCTAACAATGAAAAAGACAATACTTGTAATAAATTCACCAACCCGGCCTGCTACTTACCA
                      ____________________________________________________________
consensus             TCTAACAATGAAAAAGACAATACTTGTAATAAATTCACCAACCCGGCCTGCTACTTACCA
 
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JMSF023I06+           GCCTAAACAAAATAGTGTTTCGCATTAATTTGGGGATCGTAAGCTCAATTTCTTTGTTAA
                      ____________________________________________________________
consensus             GCCTAAACAAAATAGTGTTTCGCATTAATTTGGGGATCGTAAGCTCAATTTCTTTGTTAA
 
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JMSF023I06+           ACACAGAGAGAGGACCACAATCAATGTTAAGCACCAAACACCTGTCTTTGGTCTTTGGAC
                      ____________________________________________________________
consensus             ACACAGAGAGAGGACCACAATCAATGTTAAGCACCAAACACCTGTCTTTGGTCTTTGGAC
 
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JMSF023I06+           TTGCTTTTTCCTTCTTTCTTCCAGTGTGAAATTAAGATCTAATTATCTCTTCACTTTACT
                      ____________________________________________________________
consensus             TTGCTTTTTCCTTCTTTCTTCCAGTGTGAAATTAAGATCTAATTATCTCTTCACTTTACT
 
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JMSF023I06+           CGACTCTAAAAAAAAGCTCCAAAAAGAAAACCAAAATTGGATAAAAGTAAAACTTGCTTT
                      ____________________________________________________________
consensus             CGACTCTAAAAAAAAGCTCCAAAAAGAAAACCAAAATTGGATAAAAGTAAAACTTGCTTT
 
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JMSF023I06+           AACTCTATCAGAGCAGATTATACACGATCAACAGTTATATTTTAATCCAACTTTATCTTT
                      ____________________________________________________________
consensus             AACTCTATCAGAGCAGATTATACACGATCAACAGTTATATTTTAATCCAACTTTATCTTT
 
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JMSF023I06+           CACCATAAAACTAAACAAGTCAAAGCACCACAACAAAATAAATCACTAATTATAAGGCGA
                      ____________________________________________________________
consensus             CACCATAAAACTAAACAAGTCAAAGCACCACAACAAAATAAATCACTAATTATAAGGCGA
 
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JMSF023I06+           TTAGCATAATCAAAATTGTTTATGAGAAAAAAAGAAAGATGACTTACAGGTTTAGATCTT
JMSF032L16+                                                          AGGTTTAGATCTT
JMSF035K21+                                                          AGGTTTAGATCTT
                      ____________________________________________________________
consensus             TTAGCATAATCAAAATTGTTTATGAGAAAAAAAGAAAGATGACTTACAGGTTTAGATCTT
 
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JMSF023I06+           TTTGCTCCACAAACTTTGTCAGAAACGACAGC                            
JMSF032L16+           TTTGCTCCACAAACTTTGTCAGAAACGACAGCCTCAGTTTGGGAAGCAGCAGAGGCTTTA
JMSF035K21+           TTTGCTCCACAAACTTTGTCAGAAACGACAGCCTCAGTTTGGGAAGCAGCAGAGGCTTTA
                      ____________________________________________________________
consensus             TTTGCTCCACAAACTTTGTCAGAAACGACAGCCTCAGTTTGGGAAGCAGCAGAGGCTTTA
 
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JMSF032L16+           AGGCTTAAGCAAGCAGAAGTTCTTGAAGGCCATGAAAAAGTCTGACCAAAACACAACTTT
JMSF035K21+           AGGCTTAAGCAAGCAGAAGTTCTTGAAGGCCATGAAAAAGTCTGACCAAAACACAACTTT
                      ____________________________________________________________
consensus             AGGCTTAAGCAAGCAGAAGTTCTTGAAGGCCATGAAAAAGTCTGACCAAAACACAACTTT
 
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JMSF032L16+           GGATTCTTCAAAGAAGAGGTCTTAGCATTGAAGTTTCTGCCAAAACTACAAACCCCAACC
JMSF035K21+           GGATTCTTCAAAGAAGAGGTCTTAGCATTGAAGTTTCTGCCAAAACTACAAACCCCAACC
                      ____________________________________________________________
consensus             GGATTCTTCAAAGAAGAGGTCTTAGCATTGAAGTTTCTGCCAAAACTACAAACCCCAACC
 
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JMSF032L16+           TCTCTAGAACCCAAATCACTCCTGCCCAGATGCACCTTAGAGCTTCCAATCATTGAAACC
JMSF035K21+           TCTCTAGAACCCAAATCACTCCTGCCCAGATGCACCTTAGAGCTTCCAATCATTGAAACC
                      ____________________________________________________________
consensus             TCTCTAGAACCCAAATCACTCCTGCCCAGATGCACCTTAGAGCTTCCAATCATTGAAACC
 
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JMSF032L16+           TCCATAGCTACGGCTCAAAATCTGGAAAAGAACTCAAATTATTTACAAATAAATTCAAGA
JMSF035K21+           TCCATAGCTACGGCTCAAAATCTGGAAAAGAACTCAAATTATTTACAAATAAATTCAAGA
                      ____________________________________________________________
consensus             TCCATAGCTACGGCTCAAAATCTGGAAAAGAACTCAAATTATTTACAAATAAATTCAAGA
 
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JMSF032L16+           TTCAAATACACAACTCGCAAAATATGCAATCTAGGGTTGGTATTGGAAAGATTTGGAGCA
JMSF035K21+           TTCAAATACACAACTCGCAAAATATGCAATCTAGGGTTGGTATTGGAAAGATTTGGAGCA
                      ____________________________________________________________
consensus             TTCAAATACACAACTCGCAAAATATGCAATCTAGGGTTGGTATTGGAAAGATTTGGAGCA
 
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JMSF032L16+           AAGGGTACGGAGAAATTAAATATGGTGTTTGTGAAAAAGATTTGAAATTTTGAGAGCTAG
JMSF035K21+           AAGGGTACGGAGAAATTAAATATGGTGTTTGTGAAAAAGATTTGAAATTTTGAGAGCTAG
                      ____________________________________________________________
consensus             AAGGGTACGGAGAAATTAAATATGGTGTTTGTGAAAAAGATTTGAAATTTTGAGAGCTAG
 
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JMSF032L16+           AAATGCAGAGAATTTAGGGAGAAAAAAGTTGTTTGGATGCTCCTGAGAAATTGTTCCG  
JMSF035K21+           AAATGCAGAGAATTTAGGGAGAAAAAAGTTGTTTGGATGCTCCTGAGAAATTGTTCCGCC
                      ____________________________________________________________
consensus             AAATGCAGAGAATTTAGGGAGAAAAAAGTTGTTTGGATGCTCCTGAGAAATTGTTCCGCC