| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015J20 | Sequence | 532 | 009449 (2) | ref|XP_006351757.1| | 5e-37 | PREDICTED: dicarboxylate transporter 2.1, chloroplastic-like [Solanum tuberosum | 680 | 009667 (4) | ref|XP_010315125.1| | 2e-64 | PREDICTED: LOW QUALITY PROTEIN: dicarboxylate transporter 2.1, chloroplastic-li |
| JMSF035H14 | Sequence | 646 | 009449 (2) | ref|XP_006351757.1| | 8e-51 | PREDICTED: dicarboxylate transporter 2.1, chloroplastic-like [Solanum tuberosum | 726 | 009667 (4) | ref|XP_010315125.1| | 8e-98 | PREDICTED: LOW QUALITY PROTEIN: dicarboxylate transporter 2.1, chloroplastic-li |
This contig is upended
. : . : . : . : . : . :
JMSF035H14+ TCCACGAGCAAAGAAGAAAGAAATCACTATAAGCCAGATCACTTCA
____________________________________________________________
consensus TCCACGAGCAAAGAAGAAAGAAATCACTATAAGCCAGATCACTTCA
. : . : . : . : . : . :
JMFF015J20+ CTCCAAAAGCAGCAGAGAAAGGTAATGTTTTAGTTAAAACTGAGGCTGCA
JMSF035H14+ TTGGTGAATGCTCCAAAAGCAGCAGAGAAAGGTAATGTTTTAGTTAAAACTGAGGCTGTA
____________________________________________________________
consensus TTGGTGAATGCTCCAAAAGCAGCAGAGAAAGGTAATGTTTTAGTTAAAACTGAGGCTGTA
. : . : . : . : . : . :
JMFF015J20+ AGCCCCAGGAAAGCCCAAGCTCCGACCGGCAAAGGGCTGAGAACAAGGCCGGCGATGGTG
JMSF035H14+ AGCCCCAGGAAAGCCCAAGCTCCGACCGGCAAAGGGCTGAGAACAAGGCCGGCGATGGTG
____________________________________________________________
consensus AGCCCCAGGAAAGCCCAAGCTCCGACCGGCAAAGGGCTGAGAACAAGGCCGGCGATGGTG
. : . : . : . : . : . :
JMFF015J20+ GAGAGGAAGATGGCGAGCAATTGCCATGCCTGGGGAGAAACCTCGGGAGGTTTGGGGATG
JMSF035H14+ GAGAGGAAGATGGCGAGCAATTGCCATGCCTGGGGAGAAACCTCGGGAGGTTTGGGGATG
____________________________________________________________
consensus GAGAGGAAGATGGCGAGCAATTGCCATGCCTGGGGAGAAACCTCGGGAGGTTTGGGGATG
. : . : . : . : . : . :
JMFF015J20+ GCAAAGCGGACAAGAAGCCCAATAGCGACGGAGATTATCAAAGGAATGGGCTTCGCACCT
JMSF035H14+ GCAAAGCGGACAAGAAGCCCAATAGCGACGGAGATTATCAAAGGAATGGGCTTCGCACCT
____________________________________________________________
consensus GCAAAGCGGACAAGAAGCCCAATAGCGACGGAGATTATCAAAGGAATGGGCTTCGCACCT
. : . : . : . : . : . :
JMFF015J20+ TGGGGTTTGGGAGTGAGCTGGGGGGTGGCAGTAGAGATCTTATCGCTGGCGGAGGAAGCT
JMSF035H14+ TGGGGTTTGGGAGTGAGCTGGGGGGTGGCAGTAGAGATCTTATCGCTGGCGGAGGAAGCT
____________________________________________________________
consensus TGGGGTTTGGGAGTGAGCTGGGGGGTGGCAGTAGAGATCTTATCGCTGGCGGAGGAAGCT
. : . : . : . : . : . :
JMFF015J20+ CGGGTAATGAGTGGCGTAGGTTTCGAGATGGGTTTGGAAAGCGGGTTGAAGAGGAAAAGT
JMSF035H14+ CGGGTAATGAGTGGCGTAGGTTTCGAGATGGGTTTGGAAAGCGGGTTGAAGAGGAAAAGT
____________________________________________________________
consensus CGGGTAATGAGTGGCGTAGGTTTCGAGATGGGTTTGGAAAGCGGGTTGAAGAGGAAAAGT
. : . : . : . : . : . :
JMFF015J20+ TTGGAATTCAGAAGCGAGAATTTGGGCGAGGAGATGGGGCGGAGAGCGAGAGTTGCAGTG
JMSF035H14+ TTGGAATTCAGGAGCGAGAATTTGGGCGAGGAGATGGGGCGGAGAGCGAGAGTTGCAGTG
____________________________________________________________
consensus TTGGAATTCAGGAGCGAGAATTTGGGCGAGGAGATGGGGCGGAGAGCGAGAGTTGCAGTG
. : . : . : . : . : . :
JMFF015J20+ ACGGGGGAAATGGAGGTGCGTGATCGGAGGCGGGGGAAGGAGCGGTTAGAGAAGGAAGTT
JMSF035H14+ ACGGGGGAAATGGAGGTGCGTGATCGGAGGCGGGGGAAGGAGCGGTTAGAGAAGGAAGTT
____________________________________________________________
consensus ACGGGGGAAATGGAGGTGCGTGATCGGAGGCGGGGGAAGGAGCGGTTAGAGAAGGAAGTT
. : . : . : . : . : . :
JMFF015J20+ GTGGCGGAGGTGGCCGACGATGGAGAGTAGAGTGCCAAACTCGCCATTTTTCTTTCTGTT
JMSF035H14+ GTGGCGGAGGTGGCCGACGATGGAGAGTAGAGTGCCAAACTCGCCATTTTTCTTTCTGTT
____________________________________________________________
consensus GTGGCGGAGGTGGCCGACGATGGAGAGTAGAGTGCCAAACTCGCCATTTTTCTTTCTGTT
. : . : . : . : . : . :
JMFF015J20+ GT
JMSF035H14+ GTGGAGATAGAAGTGAAGGAAGAGCGGTGGGTTTTATTCGGCAAAAAGGCGGAAACTACC
____________________________________________________________
consensus GTGGAGATAGAAGTGAAGGAAGAGCGGTGGGTTTTATTCGGCAAAAAGGCGGAAACTACC