Contig 009448:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS025B11+                            GGTCCATACACTACATGATCCCCCACCGACATTGAACGTATTT
                      ____________________________________________________________
consensus                              GGTCCATACACTACATGATCCCCCACCGACATTGAACGTATTT
 
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JMFS025B11+           TTTGAAGCTTTTTGGAGTTAACTTCTCGGATTTTATGTCCACAAACGTTTTCCAAGTCAA
                      ____________________________________________________________
consensus             TTTGAAGCTTTTTGGAGTTAACTTCTCGGATTTTATGTCCACAAACGTTTTCCAAGTCAA
 
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JMFS025B11+           CAACTAGATCAACATTGACAACTCTTCCCGTCTGACCAGATGGATCCTTTACTAAACAAA
JMFS094D06+                                                  ATGGATCCTTTACTAAACAAA
                      ____________________________________________________________
consensus             CAACTAGATCAACATTGACAACTCTTCCCGTCTGACCAGATGGATCCTTTACTAAACAAA
 
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JMFS025B11+           CTATGTCCCCTTGGGAAAACAGCCTTTCGAAAGAGAGGAAATCATCGATTTTCTCGATGC
JMFS094D06+           CTATGTCCCCTTGGGAAAACAGCCTTTCGAAAGAGAGGAAATCATCGATTTTCTCGATGC
                      ____________________________________________________________
consensus             CTATGTCCCCTTGGGAAAACAGCCTTTCGAAAGAGAGGAAATCATCGATTTTCTCGATGC
 
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JMFS025B11+           TTTCCTCGAGGCTAGATAGAATGGAATAAGCATTTCCACCAAATAGGTGTTCAGCATAAT
JMFS094D06+           TTTCCTCGAGGCTAGATAGAATGGAATAAGCATTTCCACCAAATAGGTGTTCAGCATAAT
                      ____________________________________________________________
consensus             TTTCCTCGAGGCTAGATAGAATGGAATAAGCATTTCCACCAAATAGGTGTTCAGCATAAT
 
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JMFS025B11+           CCTGATCCTCAGAGTTGCTGCTCTCACTGAAACTATCAATGTCACTCAAGTTCAAATCCA
JMFS094D06+           CCTGATCCTCAGAGTTGCTGCTCTCACTGAAACTATCAATGTCACTCAAGTTCAAATCCA
                      ____________________________________________________________
consensus             CCTGATCCTCAGAGTTGCTGCTCTCACTGAAACTATCAATGTCACTCAAGTTCAAATCCA
 
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JMFS025B11+           TAATGTGAAAAAGCCACAAGTGTAACTTCAAGGTCCTTGTCTTTTGATTGTAGCTTTTCC
JMFS094D06+           TAATGTGAAAAAGCCACAAGTGTAACTTCAAGGTCCTTGTCTTTTGATTGTAGCTTTTCC
                      ____________________________________________________________
consensus             TAATGTGAAAAAGCCACAAGTGTAACTTCAAGGTCCTTGTCTTTTGATTGTAGCTTTTCC
 
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JMFS025B11+           AAATTGATTGATAGAGATGTTGTCACAACTTTGCTAAACGGTCAAGATAATATATTATAT
JMFS094D06+           AAATTGATTGATAGAGATGTTGTCACAACTTTGCTAAACGGTCAAGATAATATATTATAT
                      ____________________________________________________________
consensus             AAATTGATTGATAGAGATGTTGTCACAACTTTGCTAAACGGTCAAGATAATATATTATAT
 
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JMFS025B11+           ATATGCTTTTAAATAATTTGCTTTCTAGATCGATCTGATCTTGTGAAACAGAGATCTAGA
JMFS094D06+           ATATGCTTTTAAATAATTTGCTTTCTAGATCGATCTGATCTTGTGAAACAGAGATCTAGA
                      ____________________________________________________________
consensus             ATATGCTTTTAAATAATTTGCTTTCTAGATCGATCTGATCTTGTGAAACAGAGATCTAGA
 
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JMFS025B11+           TAGCGTCCCCAAATTTTGGAGATAAATTGCCAAAGGAGATTTGCCCAAAAGACTTTTTTT
JMFS094D06+           TAGCGTCCCCAAATTTTGGAGATAAATTGCCAAAGGAGATTTGCCCAAAAGACTTTTTTT
JMFS035H05+                      AATTTTGGAGATAAATTGCCAAAGGAGATTTGCCCAAAAGAC-TTTTTT
                      ____________________________________________________________
consensus             TAGCGTCCCCAAATTTTGGAGATAAATTGCCAAAGGAGATTTGCCCAAAAGACTTTTTTT
 
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JMFS025B11+           TTTTTGTATTTATGGAATCTACTTAAAGACTCCAAAATGCTAAAGGAA            
JMFS094D06+           TTTTTGTATTTATGGAATCTACTTAAAGACTCCAAAATGCTAAAGGAACTTTCCCACAGC
JMFS035H05+           TTTTAGTATTTATGGAATCTACTTANAGACTCCAAAATGCTAAAGGAACTTTCCCACAGC
                      ____________________________________________________________
consensus             TTTTTGTATTTATGGAATCTACTTAAAGACTCCAAAATGCTAAAGGAACTTTCCCACAGC
 
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JMFS094D06+           TTAAATGAGTCTGGTATGAAATGCAAATTGAGTTCTTCCTGACACAATTTGAAGTTGAAG
JMFS035H05+           TTAAATGAGTCTGGTATGAAATGCAAATTGAGTTCTTCCTGACACAATTTGAAGTTGAAG
                      ____________________________________________________________
consensus             TTAAATGAGTCTGGTATGAAATGCAAATTGAGTTCTTCCTGACACAATTTGAAGTTGAAG
 
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JMFS094D06+           CCCCAGTTC                                                   
JMFS035H05+           CCCGAGTTCCCTGCTGAATGACCCGATTCTTTGCTGAACTGGGAATGTAATACCTAAAAG
                      ____________________________________________________________
consensus             CCCGAGTTCCCTGCTGAATGACCCGATTCTTTGCTGAACTGGGAATGTAATACCTAAAAG
 
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JMFS035H05+           AACCGCAAAAAGATAACTATCCAACTAGAGGACTTTCAACATTTGCCAAAGGAGATTTGC
                      ____________________________________________________________
consensus             AACCGCAAAAAGATAACTATCCAACTAGAGGACTTTCAACATTTGCCAAAGGAGATTTGC
 
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JMFS035H05+           CCAGTTTTCCCTTAAGAAAAACCGATGAAGCAATCAGGTTCACCCGCTGCCAAAGGAGAT
                      ____________________________________________________________
consensus             CCAGTTTTCCCTTAAGAAAAACCGATGAAGCAATCAGGTTCACCCGCTGCCAAAGGAGAT
 
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JMFS035H05+           GTATTTGCCTCAGATTAAGGTCTCGATAACCAGAAAAGAGCCAGTTTCCATTGCCTAAAA
                      ____________________________________________________________
consensus             GTATTTGCCTCAGATTAAGGTCTCGATAACCAGAAAAGAGCCAGTTTCCATTGCCTAAAA
 
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JMFS035H05+           TGTTCTAAATGCCATAAAGATTTTCATTTCTCAAGCAACCCGGCCAGCAAACTTCAAAAT
JMFS048G08+                                        CTCAAGCAACCCGGCCAGCAAACTTCAAAAT
                      ____________________________________________________________
consensus             TGTTCTAAATGCCATAAAGATTTTCATTTCTCAAGCAACCCGGCCAGCAAACTTCAAAAT
 
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JMFS035H05+           GAAACAAGTTTCTGAAAGCACCAAACTTGGTAGCTAACTAACTCGAGATATCCTGTAGTT
JMFS048G08+           GGAACAAGTTTCTGAAAGCACCAAACTTGGTAGCTAACTAACTCGAGATATCCTGTAGTT
                      ____________________________________________________________
consensus             GGAACAAGTTTCTGAAAGCACCAAACTTGGTAGCTAACTAACTCGAGATATCCTGTAGTT
 
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JMFS035H05+           CGAAGCCAATTTGTCAGAATAACCGCTTCTATTCTCAAATACTCTGTATCAAATAACAGC
JMFS048G08+           CGAAGCCAATTTGTCAGAATAACCGCTTCTATTCTCAAATACTCTGTATCAAATAACAGC
                      ____________________________________________________________
consensus             CGAAGCCAATTTGTCAGAATAACCGCTTCTATTCTCAAATACTCTGTATCAAATAACAGC
 
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JMFS035H05+           TCGG                                                        
JMFS048G08+           TCGGGCTACTTAAAACCATGCACGGTGCTTGTGAAAAACAACCTCTAGTAGGAAAATGAT
                      ____________________________________________________________
consensus             TCGGGCTACTTAAAACCATGCACGGTGCTTGTGAAAAACAACCTCTAGTAGGAAAATGAT
 
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JMFS048G08+           CATTTCAAGTGGAAGAAGCTTCTCTTTAGAGAAACCATGGCAGCCCAGAAGCCTCCATAA
                      ____________________________________________________________
consensus             CATTTCAAGTGGAAGAAGCTTCTCTTTAGAGAAACCATGGCAGCCCAGAAGCCTCCATAA
 
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JMFS048G08+           AGTAGCTAAAAAGCTGGGAAAGTAAAACAAGCCAACTCGCCAACCTTCTCTCCACTTTCT
                      ____________________________________________________________
consensus             AGTAGCTAAAAAGCTGGGAAAGTAAAACAAGCCAACTCGCCAACCTTCTCTCCACTTTCT
 
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JMFS048G08+           CGCAGATTCTTTGACTTTCTGGCGATTTCCTTCACTTTCCCCACXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus             CGCAGATTCTTTGACTTTCTGGCGATTTCCTTCACTTTCCCCACNNNNNNNNNNNNNNNN
 
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JMFS048G08+           XXXXXXXXXXXXGGGGGGGGTTGCGGAGATGATCAGCAAGGAAGAATATAAGAAAGAATA
JMFF043F21+                       GGGGGGGGTTGCGGAGATGATCAGCAAGGAAGAATATAAGAAAGAATA
rJMFF043F21-                      GGGGGGGGTTGCGGAGATGATCCGCAAGGAAGAATATAAGAAAGAATA
JMSF035D08+                       GGGGGGGGTTGCGGAGATGATCAGCAAGGAAGAATATAAGAAAGAATA
                      ____________________________________________________________
consensus             NNNNNNNNNNNNGGGGGGGGTTGCGGAGATGATCAGCAAGGAAGAATATAAGAAAGAATA
 
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JMFS048G08+           TGGGGAATTCAGAGGGGTGGCCAAGACCCTCCCCAAATCCCCTTCATCAAGCCATTCCCA
JMFF043F21+           TGGGGAATTCAGAGGGGTGGCCAAGACCCTCCCCAAATCCCCTTCATCAAGCCATTCCCA
rJMFF043F21-          TGGGGAATTCAGAGGGGTGGCCAAGACCCTCCCCAAATCCCCTTCATCAAGCCATTCCCA
JMSF035D08+           TGGGGAATTCAGAGGGGTGGCCAAGACCCTCCCCAAATCCCCTTCATCAAGCCATTCCCA
                      ____________________________________________________________
consensus             TGGGGAATTCAGAGGGGTGGCCAAGACCCTCCCCAAATCCCCTTCATCAAGCCATTCCCA
 
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JMFS048G08+           AATCTTGAAAACATTGCATTATCAGCATAAGAATCTCTCTCTCTCTCTCTCTCTCTCTCA
JMFF043F21+           AATCTTGAAAACATTGCATTATCAGCATAAGAATCTCTCTCTCTCTCTCTCTCTCTCTCA
rJMFF043F21-          AATCTTGAAAACATTGCATTATCAGCATAAGAATCTCTCTCTCTCTCTCTCTCTCTCTCA
JMSF035D08+           AATCTTGAAAACANTGCATTATCAGCATAAGAATCTCTCTCTCTCTCTCTCTCTCTCTCA
                      ____________________________________________________________
consensus             AATCTTGAAAACATTGCATTATCAGCATAAGAATCTCTCTCTCTCTCTCTCTCTCTCTCA
 
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JMFF043F21+           CACACACAC                                                   
rJMFF043F21-          CACACACAC                                                   
JMSF035D08+           CACACACACAGTGGGCGTTTGTGCAGGAGAAAAAGTGTCCGTTAATGGAGGATTTGTTTC
                      ____________________________________________________________
consensus             CACACACACAGTGGGCGTTTGTGCAGGAGAAAAAGTGTCCGTTAATGGAGGATTTGTTTC