| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN012G05 | Sequence | 623 | 009445 (7) | ref|XP_009773334.1| | 132 | PREDICTED: uncharacterized protein LOC104223572 [Nicotiana sylvestris] | |||||
| JMFN014L08 | Sequence | 627 | 009445 (7) | ref|XP_009773334.1| | 145 | PREDICTED: uncharacterized protein LOC104223572 [Nicotiana sylvestris] | |||||
| JMSF002B10 | Sequence | 219 | 001755 (31) | ref|XP_009587091.1| | 95.9 | PREDICTED: uncharacterized protein LOC104084837 [Nicotiana tomentosiformis] | 732 | 009445 (7) | ref|XP_009773334.1| | 145 | PREDICTED: uncharacterized protein LOC104223572 [Nicotiana sylvestris] |
| JMSF034N17 | Sequence | 684 | 009445 (7) | ref|XP_011076633.1| | 4e-20 | PREDICTED: polyadenylate-binding protein-interacting protein 2-like [Sesamum in | 649 | 009445 (7) | ref|XP_009587091.1| | 83.6 | PREDICTED: uncharacterized protein LOC104084837 [Nicotiana tomentosiformis] |
| JMSF041E05 | Sequence | 797 | 009445 (7) | ref|XP_011076633.1| | 8e-20 | PREDICTED: polyadenylate-binding protein-interacting protein 2-like [Sesamum in | 664 | 009445 (7) | ref|XP_009587091.1| | 83.6 | PREDICTED: uncharacterized protein LOC104084837 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF041E05+ TTTTTTTTTTGTGGAGAG
____________________________________________________________
consensus TTTTTTTTTTGTGGAGAG
. : . : . : . : . : . :
rJMSF034N17- CACTTCTTACAGGAGATTACATGACTCGATA
rJMSF041E05- CACTTCTTACAGGAGATTACATGACTCGATA
JMSF041E05+ AATGATTAAACTCTTTTGGTTGTTTATTCAACTTCTTACAGGAGATTACATGACTCGATA
rJMSF002B10- CATGACTCGATA
____________________________________________________________
consensus AATGATTAAACTCTTTTGGTTGTTTATTCCACTTCTTACAGGAGATTACATGACTCGATA
. : . : . : . : . : . :
rJMSF034N17- CGACTTCCAATTTCCAAACAGAAGACTGGCAGGGAACTACGTTAGCTTTAGGCAAGCAAG
rJMSF041E05- CGACTTCCAATTTCCAAACAGAAGACTGGCAGGGAACTACGTTAGCTTTAGGCAAGCAAG
JMSF041E05+ CGACTTCCAATTTCCAAACAGAAGACTGGCAGGGAACTACGTTAGCTTTAGGCAAGCAAG
JMFN012G05+ TTCCAAACAGAAGACTGGCAGGGAACTACGTTAGCTTTAGGCAAGCAAG
rJMSF002B10- CGACTTCCAATTTCCAAACAGAAGACTGGCAGGGAACTACGTTAGCTTTAGGCAAGCAAG
JMSF034N17+ ACTACGTTAGCTTTAGGCAAGCAAG
____________________________________________________________
consensus CGACTTCCAATTTCCAAACAGAAGACTGGCAGGGAACTACGTTAGCTTTAGGCAAGCAAG
. : . : . : . : . : . :
rJMSF034N17- CAACTGTACAACAACAAGCCTAACAAAAGCTGAAATGAAAAGTTTGTTTATCCGACTCGG
rJMSF041E05- CAACTGTACAACAACAAGCCTAACAAAAGCTGAAATGAAAAGTTTGTTTATCCGACTCGG
JMSF041E05+ CAACTGTACAACAACAAGCCTAACAAAAGCTGAAATGAAAAGTTTGTTTATCCGACTCGG
JMFN014L08+ ACAACAACAAGCCTAACAAAAGCTGAAATGAAAAGTTTGTTTATCCGACTCGG
JMFN012G05+ CAACTGTACAACAACAAGCCTAACAAAAGCTGAAATGAAAAGTTTGTTTATCCGACTCGG
rJMSF002B10- CAACTGTACAACAACAAGCCTAACAAAAGCTGAAATGAAAAGTTTGTTTATCCGACTCGG
JMSF034N17+ CAACTGTACAACAACAAGCCTAACAAAAGCTGAAATGAAAAGTTTGTTTATCCGACTCGG
____________________________________________________________
consensus CAACTGTACAACAACAAGCCTAACAAAAGCTGAAATGAAAAGTTTGTTTATCCGACTCGG
. : . : . : . : . : . :
rJMSF034N17- TACTAAGTAATGACCTAACTCAGTGAGTCAAGCAAACGAAACGATTACGATCCGCTCTAC
rJMSF041E05- TACTAAGTAATGACCTAACTCAGTGAGTCAAGCAAACGAAACGATTACGATCCGCTCTAC
JMSF041E05+ TACTAAGTAATGACCTAACTCAGTGAGTCAAGCAAACGAAACGATTACGATCCGCTCTAC
JMFN014L08+ TACTAAGTAATGACCTAACTCAGTGAGTCAAGCAAACGAAACGATTACGATCCGCTCTAC
JMFN012G05+ TACTAAGTAATGACCTAACTCAGTGAGTCAAGCAAACGAAACGATTACGATCCGCTCTAC
rJMSF002B10- TACTAAGTAATGACCTAACTCAGTGAGTCAAGCAAACGAAACGATTACGATCCGCTCTAC
JMSF034N17+ TACTAAGTAATGACCTAACTCAGTGAGTCAAGCAAACGAAACGATTACGATCCGCTCTAC
____________________________________________________________
consensus TACTAAGTAATGACCTAACTCAGTGAGTCAAGCAAACGAAACGATTACGATCCGCTCTAC
. : . : . : . : . : . :
rJMSF034N17- CGCGGCTGCTGAATCGGCCTGGGGCTCACCTTCACATTCACGATCTTCGGCGCCTTCTTG
rJMSF041E05- CGCGGCTGCTGAATCGGCCTGGGGCTCACCTTCACATTCACGATCTTCGGCGCCTTCTTG
JMSF041E05+ CGCGGCTGCTGAATCGGCCTGGGGCTCACCTTCACATTCACGATCTTCGGCGCCTTCTTG
JMFN014L08+ CGCGGCTGCTGAATCGGCCTGGGGCTCACCTTCACATTCACGATCTTCGGCGCCTTCTTG
JMFN012G05+ CGCGGCTGCTGAATCGGCCTGGGGCTCACCTTCACATTCACGATCTTCGGCGCCTTCTTG
rJMSF002B10- CGCGGCTGCTGAATCGGCCTGGGGCTCACCTTCACATTCACGATCTTCGGCGCCTTCTTG
JMSF034N17+ CGCGGCTGCTGAATCGGCCTGGGGCTCACCTTCACATTCACGATCTTCGGCGCCTTCTTG
____________________________________________________________
consensus CGCGGCTGCTGAATCGGCCTGGGGCTCACCTTCACATTCACGATCTTCGGCGCCTTCTTG
. : . : . : . : . : . :
rJMSF034N17- CCGTACTTGGGAATCTCCGCCGCGGCTCGCGGTTTCTGCCACTTCAAGGCTCCTAGAGTC
rJMSF041E05- CCGTACTTGGGAATCTCCGCCGCGGCTCGCGGTTTCTGCCACTTCAAGGCTCCTAGAGTC
JMSF041E05+ CCGTACTTGGGAATCTCCGCCGCGGCTCGCGGTTTCTGCCACTTCAAGGCTCCTAGAGTC
JMFN014L08+ CCGTACTTGGGAATCTCCGCCGCGGCTCGCGGTTTCTGCCACTTCAAGGCTCCTAGAGTC
JMFN012G05+ CCGTACTTGGGAATCTCCGCCGCGGCTCGCGGTTTCTGCCACTTCAAGGCTCCTAGAGTC
rJMSF002B10- CCGTACTTGGGAATCTCCGCCGCGGCTCGCGGTTTCTGCCACTTCAAGGCTCCTAGAGTC
JMSF034N17+ CCGTACTTGGGAATCTCCGCCGCGGCTCGCGGTTTCTGCCACTTCAAGGCTCCTAGAGTC
____________________________________________________________
consensus CCGTACTTGGGAATCTCCGCCGCGGCTCGCGGTTTCTGCCACTTCAAGGCTCCTAGAGTC
. : . : . : . : . : . :
rJMSF034N17- ACCAGATCCGTCTTAGTCTCCTCCTCTTACATCCACCAAACACACACTCAGTTAGTTAGA
rJMSF041E05- ACCAGATCCGTCTTAGTCTCCTCCTCTTACATCCACCAAACACACACTCAGTTAGTTAGA
JMSF041E05+ ACCAGATCCGTCTTAGTCTCCTCCTCTTACATCCACCAAACACACACTCAGTTAGTTAGA
JMFN014L08+ ACCAGATCCGTCTTAGTCTCCTCCTC-TACATCCACCAAACACACACTCAGTTAGTTAGA
JMFN012G05+ ACCAGATCCGTCTTAGTCTCCTCCTC-TACATCCACCAAACACACACTCAGTTAGTTAGA
rJMSF002B10- ACCAGATCCGTCTTAGTCTCCTCCTC-TACATCCACCAAACACACACTCAGTTAGTTAGA
JMSF034N17+ ACCAGATCCGTCTTAGTCTCCTCCTCTTACATCCACCAAACACACACTCAGTTAGTTAGA
____________________________________________________________
consensus ACCAGATCCGTCTTAGTCTCCTCCTCTTACATCCACCAAACACACACTCAGTTAGTTAGA
. : . : . : . : . : . :
rJMSF034N17- AACACGAATCGAAATAGCTGGGGATAAAAAAAAACTCATGAACTTACGCTCGGTGTTACC
rJMSF041E05- AACACGAATCGAAATAGCTGGGGATAAAAAAAAACTCATGAACTTACGCTCGGTGTTACC
JMSF041E05+ AACACGAATCGAAATAGCTGGGGATAAAAAAAAACTCATGAACTTACGCTCGGTGTTACC
JMFN014L08+ AACACGAATCGAAATAGCTGGGGATAAAAAAAAACTCATGAACTTACGCTCGGTGTTACC
JMFN012G05+ AACACGAATCGAAATAGCTGGGGATAAAAAAAAACTCATGAACTTACGCTCGGTGTTACC
rJMSF002B10- AACACGAATCGAAATAGCTGGGGATAAAAAAAAACTCATGAACTTACGCTCGGTGTTACC
JMSF034N17+ AACACGAATCGAAATAGCTGGGGATAAAAAAAAACTCATGAACTTACGCTCGGTGTTACC
____________________________________________________________
consensus AACACGAATCGAAATAGCTGGGGATAAAAAAAAACTCATGAACTTACGCTCGGTGTTACC
. : . : . : . : . : . :
rJMSF034N17- GGAGTCGCGGACCGTTCCGTCGGCGAAAGGATCGGAGTCGAAGCCGGAGAAATCGAAGTC
rJMSF041E05- GGAGTCGCGGACCGTTCCGTCGGCGAAAGGATCGGAGTCGAAGCCGGAGAAATCGAAGTC
JMSF041E05+ GGAGTCGCGGACCGTTCCGTCGGCGAAAGGATCGGAGTCGAAGCCGGAGAAATCGAAGTC
JMFN014L08+ GGAGTCGCGGACCGTTCCGTCGGCGAAAGGATCGGAGTCGAAGCCGGAGAAATCGAAGTC
JMFN012G05+ GGAGTCGCGGACCGTTCCGTCGGCGAAAGGATCGGAGTCGAAGCCGGAGAAATCGAAGTC
rJMSF002B10- GGAGTCGCGGACCGTTCCGTCGGCGAAAGGATCGGAGTCGAAGCCGGAGAAATCGAAGTC
JMSF034N17+ GGAGTCGCGGACCGTTCCGTCGGCGAAAGGATCGGAGTCGAAGCCGGAGAAATCGAAGTC
____________________________________________________________
consensus GGAGTCGCGGACCGTTCCGTCGGCGAAAGGATCGGAGTCGAAGCCGGAGAAATCGAAGTC
. : . : . : . : . : . :
rJMSF034N17- GATATCGAAATCATCCAAGTCGGGGAAGGAGGAGTCCACATCGGCGTAGCACTCGCGGAG
rJMSF041E05- GATATCGAAATCATCCAAGTCGGGGAAGGAGGAGTCCACATCGGCGTAGCACTCGCGGAG
JMSF041E05+ GATATCGAAATCATCCAAGTCGGGGAAGGAGGAGTCCACATCGGCGTAGCACTCGCGGAG
JMFN014L08+ GATATCGAAATCATCCAAGTCGGGGAAGGAGGAGTCCACATCGGCGTAGCACTCGCGGAG
JMFN012G05+ GATATCGAAATCATCCAAGTCGGGGAAGGAGGAGTCCACATCGGCGTAGCACTCGCGGAG
rJMSF002B10- GATATCGAAATCATCCAAGTCGGGGAAGGAGGAGTCCACATCGGCGTAGCACTCGCGGAG
JMSF034N17+ GATATCGAAATCATCCAAGTCGGGGAAGGAGGAGTCCACATCGGCGTAGCACTCGCGGAG
____________________________________________________________
consensus GATATCGAAATCATCCAAGTCGGGGAAGGAGGAGTCCACATCGGCGTAGCACTCGCGGAG
. : . : . : . : . : . :
rJMSF034N17- CCAGTAGTCGCGGAACCAGGGAGAGTTGCGGATGAGGT-CCCACCACTGGTCGGAGAAGT
rJMSF041E05- CCAGTAGTCGCGGAACCAGGGAGAGTTGCGGATGAGGTCCCCACCACTGGTCGGAGAAGT
JMSF041E05+ CCAGTAGTCGCGGAACCAGGGAGAGTTGCGGATGAGGT-CCCACCACTGGTCGGAGAAGT
JMFN014L08+ CCAGTAGTCGCGGAACCAGGGAGAGTTGCGGATGAGGT-CCCACCACTGGTCGGAGAAGT
JMFN012G05+ CCAGTAGTCGCGGAACCAGGGAGAGTTGCGGATGAGGT-CCCACCACTGGTCGGAGAAGT
rJMSF002B10- CCAGTAGTCGCGGAACCAGGGAGAGTTGCGGATGAGGT-CCCACCACTGGTCGGAGAAGT
JMSF034N17+ CCAGTAGTCGCGGAACCAGGGAGAGTTGCGGATGAGGT-CCCACCACTGGTCGGAGAAGT
____________________________________________________________
consensus CCAGTAGTCGCGGAACCAGGGAGAGTTGCGGATGAGGT-CCCACCACTGGTCGGAGAAGT
. : . : . : . : . : . :
rJMSF034N17- CCTCCACCGCGCGATACG
rJMSF041E05- CCTCCACCGCGCGATACGCCGACGGCACGAA
JMSF041E05+ CCTCCACCGCGCGATACGCCGACGGCACGAAGATCGGAGCGTTTGGATTGAGCGTAGAGG
JMFN014L08+ CCTCCACCGCGCGATACGCCGACGGCACGAAGATCGGAGCGTTTGGATTGAGCGTAGAGG
JMFN012G05+ CCTCCACCGCGCGATACGCCGACGGCACGAAGATCG
rJMSF002B10- CCTCCACCGCGCGATACGCCGACGGCACGAAGATCGGAGCGTTTGGATTGAGCGTAGAGG
JMSF034N17+ CCTCCACCGCGCGATACGCCGACGGCACGAAGATCGGAGCGTTTGGATTGAGCGTAGAGG
____________________________________________________________
consensus CCTCCACCGCGCGATACGCCGACGGCACGAAGATCGGAGCGTTTGGATTGAGCGTAGAGG
. : . : . : . : . : . :
JMSF041E05+ TCGCCATTTTTGGGATCGGAGAATTTGTTTTGGGAGAAAAAGGAAGGAAGGTTT
JMFN014L08+ TCGCCATTTTTGGGATCGGAGAATTTGTTTTGGGAG
rJMSF002B10- TCGCCATTTTTGGGATCGGAGAATTTGTTTTGGGAGAAAAAGNAAGGAAGGTTTTAGCT
JMSF034N17+ TCGCCATTTTTGGGATCGGAGAATTTGTTTTGGGAGAAAAAGGAAGGAAGGTTTCAGCCC
____________________________________________________________
consensus TCGCCATTTTTGGGATCGGAGAATTTGTTTTGGGAGAAAAAGGAAGGAAGGTTTTAGCTC