Contig 009440:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF033M20+                        CTGCATTTGCCCCTTGCTCTCATTGTTAGTCAGATTGTCTGTAAACT
                      ____________________________________________________________
consensus                          CTGCATTTGCCCCTTGCTCTCATTGTTAGTCAGATTGTCTGTAAACT
 
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JMSF033M20+           TTGCTACCTCCACAGTGGTTTTCCACTTGAAATCTGCAAAGCTGCCATTTATTGATTCTC
                      ____________________________________________________________
consensus             TTGCTACCTCCACAGTGGTTTTCCACTTGAAATCTGCAAAGCTGCCATTTATTGATTCTC
 
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JMSF033M20+           CATGCACAGATACACCTACTAAGTGCCCTCCATCCAAATGGTTTGTGCCAGAAAATTGGG
                      ____________________________________________________________
consensus             CATGCACAGATACACCTACTAAGTGCCCTCCATCCAAATGGTTTGTGCCAGAAAATTGGG
 
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JMSF033M20+           ACGAGGTGGATGCAGATGTAACTACAGAGCTTTGCACCTCATTGGAACTTTCATTAGACA
                      ____________________________________________________________
consensus             ACGAGGTGGATGCAGATGTAACTACAGAGCTTTGCACCTCATTGGAACTTTCATTAGACA
 
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JMSF033M20+           AGACACGTAGCAGACCCATCTATGTCACCAAAGGATTAATTCTTCCTGATTGTCCTGTTT
                      ____________________________________________________________
consensus             AGACACGTAGCAGACCCATCTATGTCACCAAAGGATTAATTCTTCCTGATTGTCCTGTTT
 
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JMSF033M20+           TTCAGGAAACCCAAAATAAAGAGATATAGTGTCCAGAACAGATATTNTGACCTCCTCCTG
                      ____________________________________________________________
consensus             TTCAGGAAACCCAAAATAAAGAGATATAGTGTCCAGAACAGATATTNTGACCTCCTCCTG
 
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JMSF008C17+                                                     CAATGTGATAGAAAGGCG
JMSF033M20+           GCAAGCAAAAGTTCATAGCTCTTGCTAGAGCTAACACATTGGCAATGTGATAGAAAGGCG
                      ____________________________________________________________
consensus             GCAAGCAAAAGTTCATAGCTCTTGCTAGAGCTAACACATTGGCAATGTGATAGAAAGGCG
 
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JMSF008C17+           CCAGAGATCCGCCCTATCTGCCACTACATTCAATCAAGCTTCGGATCATCAATCAACGTA
JMSF033M20+           CCAGAGATCCGCCTTATCTGCCACTACATTCAATCAAGCTTCGGATCATCAATCAACGTA
                      ____________________________________________________________
consensus             CCAGAGATCCGCCTTATCTGCCACTACATTCAATCAAGCTTCGGATCATCAATCAACGTA
 
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JMSF008C17+           CGGAAGAAAAAAAAACAGAAATTTAAGGTTGAATCAAGCTTTAAAAGTATTTTTTTTTCT
JMSF033M20+           CGGAAGAAAAAAAAACAGAAATTTAAGGTTGAATCAAGCTTTAAAAGTATTTTTTTTTCT
                      ____________________________________________________________
consensus             CGGAAGAAAAAAAAACAGAAATTTAAGGTTGAATCAAGCTTTAAAAGTATTTTTTTTTCT
 
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JMSF008C17+           TTTAATTCTGAGCTTGATGGGAGATGGAGGATGAAGGTGGTTGTTGGGTTGGGTTTGCGC
JMSF033M20+           TTTAATTCTGAGCTTGATGGGAGATGGAGGATGAAGGTGGTTGTTGGGTTGGGTTTGCGC
                      ____________________________________________________________
consensus             TTTAATTCTGAGCTTGATGGGAGATGGAGGATGAAGGTGGTTGTTGGGTTGGGTTTGCGC
 
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JMSF008C17+           TTCTCCTGAGTCCTGACGCCTTCTCG                                  
JMSF033M20+           TTCTCCTGAGTCCTGACGCCTTCTCGTGCTCTTTGGGTCTCTCGCTCTCTATTTTTATCA
                      ____________________________________________________________
consensus             TTCTCCTGAGTCCTGACGCCTTCTCGTGCTCTTTGGGTCTCTCGCTCTCTATTTTTATCA