Contig 009439:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011N20Sequence519009439 (9)113023322
JMFF015N09Sequence557009439 (9)dbj|BAD18102.1|3e-06leucine-rich repeat receptor-like kinase [Ipomoea batatas]753012674 (9)dbj|BAD18097.1|2e-115putative serine/threonine protein kinase [Ipomoea batatas]
JMFF026F15Sequence578009439 (9)dbj|BAD18102.1|7e-17leucine-rich repeat receptor-like kinase [Ipomoea batatas]733012674 (9)dbj|BAD18097.1|2e-105putative serine/threonine protein kinase [Ipomoea batatas]
JMSF006L15Sequence377009439 (9)325012674 (9)dbj|BAD18097.1|1e-10putative serine/threonine protein kinase [Ipomoea batatas]
JMSF025J12Sequence630009439 (9)dbj|BAD18102.1|2e-24leucine-rich repeat receptor-like kinase [Ipomoea batatas]793012674 (9)dbj|BAD18097.1|7e-158putative serine/threonine protein kinase [Ipomoea batatas]
JMSF033L24Sequence635009439 (9)dbj|BAD18102.1|9e-24leucine-rich repeat receptor-like kinase [Ipomoea batatas]638012674 (9)dbj|BAD18097.1|1e-40putative serine/threonine protein kinase [Ipomoea batatas]
JMSF039C16Sequence406009439 (9)dbj|BAD18102.1|3e-33leucine-rich repeat receptor-like kinase [Ipomoea batatas]
JMSF041N05Sequence793009439 (9)dbj|BAD18102.1|2e-87leucine-rich repeat receptor-like kinase [Ipomoea batatas]628012674 (9)dbj|BAD18097.1|5e-87putative serine/threonine protein kinase [Ipomoea batatas]
JMSF043E02Sequence703009439 (9)dbj|BAD18102.1|4e-45leucine-rich repeat receptor-like kinase [Ipomoea batatas]690012674 (9)dbj|BAD18097.1|3e-67putative serine/threonine protein kinase [Ipomoea batatas]

Alignment

This contig is upended


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JMSF041N05+              TGCTGGGTATATCACCATTGAATTTGTTGTTGGAAAGATCGAGGGTNTGAAGCCTTT
                      ____________________________________________________________
consensus                TGCTGGGTATATCACCATTGAATTTGTTGTTGGAAAGATCGAGGGTNTGAAGCCTTT
 
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JMSF041N05+           NTAATTTCCCGATTTCAGCTGGAATATGTCCTGAAATAGCATTGTTTTGCAGCAACACAG
                      ____________________________________________________________
consensus             NTAATTTCCCGATTTCAGCTGGAATATGTCCTGAAATAGCATTGTTTTGCAGCAACACAG
 
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JMSF041N05+           ACTGCAAGTTTGTTAAGTTGCCAATTCCAGGTGACAAGGTCCCTGATAAACTCTGGCTGG
                      ____________________________________________________________
consensus             ACTGCAAGTTTGTTAAGTTGCCAATTCCAGGTGACAAGGTCCCTGATAAACTCTGGCTGG
 
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JMSF039C16+                CCCAAAGCAGAAACATAGCCNTCGGGGGAACAGGTGNCCATTCTCCAACTGCAGG
JMSF041N05+           GTAGTCCCAAGGCAGACACATAGCCATCAGGTGAACAGGTAACCATTCTCCAACTGCAGG
JMSF043E02+                CCCAAGGCAGACACATAGCCATCAGGTGAACAGGTAACCATTCTCCAACTGCAGG
                      ____________________________________________________________
consensus             GTAGTCCCAAGGCAGACACATAGCCATCAGGTGAACAGGTAACCATTCTCCAACTGCAGG
 
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JMSF039C16+           GGTCTACAGAATTAACATCCCAGTTCTCCAGAACATTGTAAGGATCATGTAAAGAGGTCT
JMSF041N05+           GGTCTACAGAGTTAACATCCCAATTTTCCAGAACATTGTAAGGGTCATGTAAACCAGTCT
JMFF026F15+                                                 TAAGGGTCATGTAAACCAGTCT
JMSF043E02+           GGTNTACAGAGTTAACATCCCAATTTTCCAGAACATTGTAAGGGTCATGTAAACCAGTCT
JMSF025J12+                                       CAGAACATTGTAAGGGTCATGTAAACCAGTCT
JMSF033L24+                                       CAGAACATTGTAAGGGTCATGTAAACCAGTCT
                      ____________________________________________________________
consensus             GGTCTACAGAGTTAACATCCCAATTTTCCAGAACATTGTAAGGGTCATGTAAACCAGTCT
 
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JMSF039C16+           TTATAGCCATCAAAGCAACCACTTCATAGTTTACACCAGTAGGGGAAAGAGTAGCA    
JMSF041N05+           TTATAGCAATCAAAGCCACCACTTCATAGTTCACCCCAGATGGTGAAAGAGTAGCAGAAC
JMFF026F15+           TTATAGCAATCAAAGCCACCACTTCATAGTTCACCCCAGATGGTGAAAGAGTAGCAGAAC
JMSF043E02+           TTATAGCAATCAAAGCCACCACTTCATAGTTCACCCCAGATGGTGAAAGAGTAGCAGAAC
JMSF025J12+           TTATAGCAATCAAAGCCACCACTTCATAGTTCACCCCAGATGGTGAAAGAGTAGCAGAAC
JMFF015N09+                                           ACCCCAGATGGTGAAAGAGTAGCAGAAC
JMSF033L24+           TTATAGCAATCAAAGCCANCACTTCATAGTTCACCCCAGATGGTGAAAGAGTAGCAGAAC
                      ____________________________________________________________
consensus             TTATAGCAATCAAAGCCACCACTTCATAGTTCACCCCAGATGGTGAAAGAGTAGCAGAAC
 
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JMSF041N05+           AAGAAGTGGCTATTAACATCCAAAT-CCCCAAGCCCAGAACTTTGAATAGCAGAAACCAC
JMFF026F15+           AAGAAGTGGCTATTAACATCCAAATCCCCCAAGCCCAGAACTTTGAATAGCAGAAACCAC
JMSF043E02+           AAGAAGTGGCTATTAACATCCAAAT-CCCCAAGCCCAGAACTTTGAATAGCAGAAACCAC
JMSF025J12+           AAGAAGTGGCTATTAACATCCAAAT-CCCCAAGCCCAGAACTTTGAATAGCAGAAACCAC
JMFF015N09+           AAGAAGTGGCTATTAACATCCAAATCCCCCAAGCCCAGAACTTTGAATAGCAGAAACCAC
JMFF011N20+                            ATCCAAAT-CCCCAAGCCCAGAACTTTGAATAGCAGAAACTAC
JMSF033L24+           AAGAAGTGGCTATTAACATCCAAAT-CCCCAAGCCCAGAACTTTGAATAGCAGAAACCAC
                      ____________________________________________________________
consensus             AAGAAGTGGCTATTAACATCCAAAT-CCCCAAGCCCAGAACTTTGAATAGCAGAAACCAC
 
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JMSF041N05+           TCCCTTTCCATAATCTACCTTTTTTTGTTTATGTTATTCTTGTATTAAGAAAAATACCCT
JMFF026F15+           TCCCTTTCCATAATCTACCTTTTTTTGTTTATGTTATTCTTGTATTAAGAAAAATACCCT
JMSF043E02+           TCCCTTTCCATAATCTACCTTTTTTTGTTTATGTTATTCTTGTATTAAGAAAAATACCCT
JMSF025J12+           TCCCTTTCCATAATCTACCTTTTTTTGTTTATGTTATTCTTGTATTAAGAAAAATACCCT
JMFF015N09+           TCCCTTTCCATAATCTACCTTTTTTTGTTTATGTTATTCTTGTATTAAGAAAAATACCCT
JMFF011N20+           TCCCTTTCCATAATCTACCTTTTTTTGTTTACGTTATTCTTGTATTAAGAAAAATACCCT
JMSF033L24+           TCCCTTTCCATAATCTACCTTTTTTTGTTTATGTTATTCTTGTATTAAGAAAAATACCCT
                      ____________________________________________________________
consensus             TCCCTTTCCATAATCTACCTTTTTTTGTTTATGTTATTCTTGTATTAAGAAAAATACCCT
 
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JMSF041N05+           CTCAGCAAAACCATAACTCTTAACAAAACATAACATGAAGCAAAGCAGCCATACTTGCTC
JMFF026F15+           CTCAGCAAAACCATAACTCTTAACAAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
JMSF043E02+           CTCAGCAAAACCATAACTCTTAACAAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
JMSF025J12+           CTCAGCAAAACCATAACTCTTAACAAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
JMFF015N09+           CTCAGCAAAACCATAACTCTTAACAAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
JMSF006L15+                                   AAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
JMFF011N20+           CTCAGCAAAACCATAACTCTTAACAAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
JMSF033L24+           CTCAGCAAAACCATAACTCTTAACAAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
                      ____________________________________________________________
consensus             CTCAGCAAAACCATAACTCTTAACAAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
 
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JMSF041N05+           ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
JMFF026F15+           ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
JMSF043E02+           ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
JMSF025J12+           ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
JMFF015N09+           ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
JMSF006L15+           ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
JMFF011N20+           ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
JMSF033L24+           ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
                      ____________________________________________________________
consensus             ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
 
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JMSF041N05+           CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
JMFF026F15+           CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
JMSF043E02+           CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
JMSF025J12+           CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
JMFF015N09+           CCAATCAAGAAACACNTGGGAAAAGTGCCCAGAAGNTAAAACTATCTATCTTTGCACGAC
JMSF006L15+           CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
JMFF011N20+           CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
JMSF033L24+           CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
                      ____________________________________________________________
consensus             CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
 
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JMSF041N05+           TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
JMFF026F15+           TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
JMSF043E02+           TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
JMSF025J12+           TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
JMFF015N09+           TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
JMSF006L15+           TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
JMFF011N20+           TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
JMSF033L24+           TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
                      ____________________________________________________________
consensus             TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
 
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JMSF041N05+           AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
JMFF026F15+           AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
JMSF043E02+           AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
JMSF025J12+           AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
JMFF015N09+           AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTNTA
JMSF006L15+           AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
JMFF011N20+           AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
JMSF033L24+           AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
                      ____________________________________________________________
consensus             AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
 
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JMSF041N05+           TTTCTAACAGATACCC                                            
JMFF026F15+           TTTCTAACAGATACCCAGGAATTCCATCTTCTTCTTCTTCCCCTTACGTTTCACCACACC
JMSF043E02+           TTTCTAACAGATACCCAGGAATTCCATCTTCTTCTTCTTCCCCTTACGTTTCACCACACC
JMSF025J12+           TTTCTAACAGATACCCAGGAATTCCATCTTCTTCCTCTTCCCCTTACGTTTCACCACACC
JMFF015N09+           TTTCTAACAGATACCCAGGAATTCCATCTTCTTCTTCTTCCCCTTACGTTTCACCACACC
JMSF006L15+           TTTCTAACAGATACCCAGGAATTCCATCTTCTTCTTCTTCCCCTTACGTTTCACCACACC
JMFF011N20+           TTTCTAACAGATACCCAGGAATTCCATCTTCTTCTTCTTCCCCTTACGTTTCACCACACC
JMSF033L24+           TTTCTAACAGATACCCAGGAATTCCATCTTCTTCTTCTTCCCCTTACGTTTCACCACACC
                      ____________________________________________________________
consensus             TTTCTAACAGATACCCAGGAATTCCATCTTCTTCTTCTTCCCCTTACGTTTCACCACACC
 
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JMFF026F15+           GATGCTCTCTCCTCTC                                            
JMSF043E02+           GATGCTCTCTCCTCTCACCAGTCGCCACCATATCCTCTCAAGATCA              
JMSF025J12+           GATGCTCTCTCCTCTCACCAGTCGCCACCATATCCTCTCAAGATCACACCATCATCT   
JMFF015N09+           GATGCTCTCTCCTCTCACCAGTCGCCACCATATCCTCTCAAGATCACAC           
JMSF006L15+           GATGCTCTCTCCTCTCACCAGTCGCCACCATATCCTCTC                     
JMFF011N20+           GATGCTCTCTCCTCTCACCAGTCGCCACCATATCCTCTCAAGATCACACCATCATCT   
JMSF033L24+           GATGCTCTCTCCTCTCACCAGTCGCCACCATATCCTCTCAAGATCACACCATCATCTCCC
                      ____________________________________________________________
consensus             GATGCTCTCTCCTCTCACCAGTCGCCACCATATCCTCTCAAGATCACACCATCATCTCCC