Contig 009434:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS114A09Sequence566009434 (2)ref|XP_006358280.1|8e-24PREDICTED: uncharacterized protein LOC102606239 isoform X2 [Solanum tuberosum]
JMSF033B11Sequence636009434 (2)ref|XP_009622266.1|5e-33PREDICTED: uncharacterized protein LOC104113712 isoform X3 [Nicotiana tomentosi806016142ref|XP_010323306.1|4e-34PREDICTED: uncharacterized protein LOC101247836 isoform X5 [Solanum lycopersicu

Alignment

This contig is upended


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JMFS114A09+                                                TTCTTGGTGTGTCATGCAATAAA
JMSF033B11+                                   CTTTCACTTAATTTTCTTGGTGTGTCATGCAATAAA
                      ____________________________________________________________
consensus                                     CTTTCACTTAATTTTCTTGGTGTGTCATGCAATAAA
 
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JMFS114A09+           AGAGCCCTTTCATTGTCTCTTTCAACTGTCATGCATTTTTTGTTCTTTTCTTGTTCATCA
JMSF033B11+           AGAGCCCTTTCATTGTCTCTTTCAACTGTCATGCATTTTTTGTTCTTTTCTTGTTCATCA
                      ____________________________________________________________
consensus             AGAGCCCTTTCATTGTCTCTTTCAACTGTCATGCATTTTTTGTTCTTTTCTTGTTCATCA
 
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JMFS114A09+           ACTTTAGAATTCAAGATCTCAATCAGATGAATTATTTCATCCCTAGAAAATGCTTTCCCC
JMSF033B11+           ACTTTAGAATTCAAGATCTCAATCAGATGAATTATTTCATCCCTAGAAAATGCTTTCCCC
                      ____________________________________________________________
consensus             ACTTTAGAATTCAAGATCTCAATCAGATGAATTATTTCATCCCTAGAAAATGCTTTCCCC
 
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JMFS114A09+           TTCATCAATTGCTCAATTCTGGAAACAACAGAATCATCATCAGAAGTCTCTGGTTTCTCT
JMSF033B11+           TTCATCAATTGCTCAATTCTGGAAACAACAGAATCATCATCAGAAGTCTCTGGTTTCTCT
                      ____________________________________________________________
consensus             TTCATCAATTGCTCAATTCTGGAAACAACAGAATCATCATCAGAAGTCTCTGGTTTCTCT
 
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JMFS114A09+           TGCTCCAACCTTTCACATTCAGTAATTTTCTTCAATGTATCAAACTGTACACTGGCACCC
JMSF033B11+           TGCTCCAACCTCTCACATTCAGTAATTTTCTTCAATGTATCAAACTGTACACTGGCACCC
                      ____________________________________________________________
consensus             TGCTCCAACCTTTCACATTCAGTAATTTTCTTCAATGTATCAAACTGTACACTGGCACCC
 
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JMFS114A09+           ATTCCTTCAGTAGAT-----------ACAAGGGGTGAAATTCTCTACATCCCTTGAATTT
JMSF033B11+           ATTCCTTCAGTAGATCTGGATACATGACAAGGGGTGAAATTCTCTACATCCCTTGAATTT
                      ____________________________________________________________
consensus             ATTCCTTCAGTAGATCTGGATACATGACAAGGGGTGAAATTCTCTACATCCCTTGAATTT
 
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JMFS114A09+           GGAATCACATCCGCATCTTCTACACCGTTGCTTTGAGTGATAGGAAGAAGAGGAGGAACA
JMSF033B11+           GGAATCACATCCGCATCTTCTACACCGTTGCTTTGAGTGATAGGAAGAAGAGGAGGAACA
                      ____________________________________________________________
consensus             GGAATCACATCCGCATCTTCTACACCGTTGCTTTGAGTGATAGGAAGAAGAGGAGGAACA
 
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JMFS114A09+           TCGAAGGGGGACTTGGAAAAGAATGAGGGTAAAATCCTGGTAGCGCTGCTGGAGATAAGT
JMSF033B11+           TCGAAGGGGGACTTGGAAAAGAATGAGGGTAAAATCCTGGTAGCGCTGCTGGAGATAAGT
                      ____________________________________________________________
consensus             TCGAAGGGGGACTTGGAAAAGAATGAGGGTAAAATCCTGGTAGCGCTGCTGGAGATAAGT
 
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JMFS114A09+           TGGTAGGCGGGATCGACGAGTTTAGAAAGCCAACCATTGCTCCCAATCCGACTCGCCGGA
JMSF033B11+           TGGTAGGCGGGATCGACGAGTTTAGAAAGCCAACCATTGCTCCCAATCCGACTCGCCGGA
                      ____________________________________________________________
consensus             TGGTAGGCGGGATCGACGAGTTTAGAAAGCCAACCATTGCTCCCAATCCGACTCGCCGGA
 
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JMFS114A09+           GTAGTAGGAGGAGGCCGAGCGTACGGAGAAGCCGGCGGCTTCCTTGAAGGTGGCTTCTTG
JMSF033B11+           GTAGTAGGAGGAGGCCGAGCGTACGGAGAAGCCGGCGGCTTCCTTGAAGGTGGCTTCTTG
                      ____________________________________________________________
consensus             GTAGTAGGAGGAGGCCGAGCGTACGGAGAAGCCGGCGGCTTCCTTGAAGGTGGCTTCTTG
 
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JMFS114A09+           AGCTTCCCTCCGGC                                              
JMSF033B11+           AGCTTCCCTCCGGCTCCTCTTTCCCCGTATAGAGACTCCATCTCTCGCGAGAAACGGCCC
                      ____________________________________________________________
consensus             AGCTTCCCTCCGGCTCCTCTTTCCCCGTATAGAGACTCCATCTCTCGCGAGAAACGGCCC