Contig 009430:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034I03Sequence594009430 (2)ref|NP_001275332.1|3e-54mas-binding factor MBF2 [Solanum tuberosum] gb|AAB31249.1| mas-binding factor MB757018040ref|XP_009802013.1|4e-50PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-1A [Nicotiana sylves
JMSF032J17Sequence644009430 (2)ref|XP_009779143.1|2e-51PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-1A-like [Nicotiana s678010021 (2)gb|EYU31064.1|3e-37hypothetical protein MIMGU_mgv1a0088351mg, partial [Erythranthe guttata]

Alignment

This contig is upended


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JMFF034I03+                            TTCACGCCCAGTAGTCTTGCCCGATCTAGCTCTTGCTCCAATT
                      ____________________________________________________________
consensus                              TTCACGCCCAGTAGTCTTGCCCGATCTAGCTCTTGCTCCAATT
 
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JMFF034I03+           GGATCAGTTTCAGTTTACTACTTTCCAACTGCTGAACATAGGCCTTCTTCCGCAGACGAC
                      ____________________________________________________________
consensus             GGATCAGTTTCAGTTTACTACTTTCCAACTGCTGAACATAGGCCTTCTTCCGCAGACGAC
 
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JMFF034I03+           TTTTACGTGCAGCTTCACGGTTTTGTGCAAGGCGTCTCAAGACCTTCTCGGGCGGTTTAC
                      ____________________________________________________________
consensus             TTTTACGTGCAGCTTCACGGTTTTGTGCAAGGCGTCTCAAGACCTTCTCGGGCGGTTTAC
 
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JMFF034I03+           TTGCTGCCTCTTCATATTTGTTATAAGGTCTGACTATTCCATGTGAAGCTTCCTCAGTCT
                      ____________________________________________________________
consensus             TTGCTGCCTCTTCATATTTGTTATAAGGTCTGACTATTCCATGTGAAGCTTCCTCAGTCT
 
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JMFF034I03+           GGTTAAATGTTTTCTCAATAACTGGCATCTGGCAGTCTAGGCTTTTCTCAACTTCTAAAA
                      ____________________________________________________________
consensus             GGTTAAATGTTTTCTCAATAACTGGCATCTGGCAGTCTAGGCTTTTCTCAACTTCTAAAA
 
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JMFF034I03+           TCATGGTTGCTGAGGCAGTCGAGTAGCCATTACCCTTGAATTCTCCCCACATGCCAAGTT
JMSF032J17+                                   AGCCATTTCCCTTGAAATCTCCCCACATCCCGAGTT
                      ____________________________________________________________
consensus             TCATGGTTGCTGAGGCAGTCGAGTAGCCATTTCCCTTGAATTCTCCCCACATGCCGAGTT
 
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JMFF034I03+           CATGTATTGGATCACATATGCCCATTCTTTTTGAGGCAACAAACTGGGTATATGTTGAAT
JMSF032J17+           GATGGATTGGATCACAGATGCCCATTCTTTTGGAGGCAACAAACTGCGTATACGTAGAAT
                      ____________________________________________________________
consensus             GATGTATTGGATCACATATGCCCATTCTTTTTGAGGCAACAAACTGGGTATATGTTGAAT
 
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JMFF034I03+           TCATTTTG                                                    
JMSF032J17+           TCATTTTGCCTGGACCAAATTCTCAATCCAAACTTCCACAAAACTGTTCAATTCCTCCAG
                      ____________________________________________________________
consensus             TCATTTTGCCTGGACCAAATTCTCAATCCAAACTTCCACAAAACTGTTCAATTCCTCCAG
 
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JMSF032J17+           CAGCACCAAACAGTGCCTAGCAAGCTAGCTCGAACAGAAAATAATAATAATAATAATATT
                      ____________________________________________________________
consensus             CAGCACCAAACAGTGCCTAGCAAGCTAGCTCGAACAGAAAATAATAATAATAATAATATT
 
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JMSF032J17+           CCCGCCAATTCCTAACCCTACTCCCTAGCTCAGATTCCAGCTCATGCGGCTTTTACAGAG
                      ____________________________________________________________
consensus             CCCGCCAATTCCTAACCCTACTCCCTAGCTCAGATTCCAGCTCATGCGGCTTTTACAGAG
 
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JMSF032J17+           GACAGAGGACGACAACAACAAGAGCAGCAGCAAGAAGAAGAAGAAGAAGAAGACGATGAT
                      ____________________________________________________________
consensus             GACAGAGGACGACAACAACAAGAGCAGCAGCAAGAAGAAGAAGAAGAAGAAGACGATGAT
 
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JMSF032J17+           GATAATGAAGATGATGAAGAAGAAGAAGGTGGACGCTGACGTCTTTTCAGCAATTCCATC
                      ____________________________________________________________
consensus             GATAATGAAGATGATGAAGAAGAAGAAGGTGGACGCTGACGTCTTTTCAGCAATTCCATC