Contig 009427:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS128E08+                                                    GTGTATAAGGAGGATAATA
                      ____________________________________________________________
consensus                                                      GTGTATAAGGAGGATAATA
 
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JMFS128E08+           AGGCCTGCCTTCAGATACATATGAAAATGCATCCATCAGAGGATTAGCCTCCAGGGTTTG
                      ____________________________________________________________
consensus             AGGCCTGCCTTCAGATACATATGAAAATGCATCCATCAGAGGATTAGCCTCCAGGGTTTG
 
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JMFS054E08+                              CTGGGTTTCACAGGCTGTGGAGCCGAGTTTTCTTCAGCTGA
JMFS128E08+           AGTGGACCAATAGGGACTACTGGGTTTCACAGACTGTGGAACCGAGTTTTCTTCAGCTGC
JMSF032H16+                              CTGGGNTTCACAGACTGTGGAACCGAGTTTTCTTCAGCTGC
                      ____________________________________________________________
consensus             AGTGGACCAATAGGGACTACTGGGTTTCACAGACTGTGGAACCGAGTTTTCTTCAGCTGC
 
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JMFS054E08+           TAGAGGCACGATAGTAGTCCTCATAGGATCAGCACCCAGTTCCGGTTTTGGTAAGAAGCC
JMFS128E08+           TAAAGGCACCGAAGTAGTCCTCATAGAATCAGCACCCAGTTCCGGTTTTGGTAAGAAGCC
JMSF032H16+           TAAAGGCACCGAAGTAGTCNTCATAGAATCAGCACCCAGTTCCGGTTTTGGTAAGAAGCC
                      ____________________________________________________________
consensus             TAAAGGCACCGAAGTAGTCCTCATAGAATCAGCACCCAGTTCCGGTTTTGGTAAGAAGCC
 
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JMFS054E08+           TGGGTTAGAAGCAAAGGGGTTGGAGTATCGCCAAGTCTGGCTACAGAGCATATTATAAGA
JMFS128E08+           TGGGCTAGAAGCAGAGGGGTTGGCGTATTGCCAAGACTGGCTAAAGAGCATATTATAAGA
JMSF032H16+           TGGGCTAGAAGCAGAGGGGTTGGCGTATTGCCAAGACTGGCTAAAGAGCATATTATAAGA
                      ____________________________________________________________
consensus             TGGGCTAGAAGCAGAGGGGTTGGCGTATTGCCAAGACTGGCTAAAGAGCATATTATAAGA
 
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JMFS054E08+           CGAGTCATTTGAAGGCAAGAGCGGATTGTAATCGGGTTTTGAATGATTGAAGCGATCATC
JMFS128E08+           CCAGTCATTTAAAGGCAAGAGCGGATTGGAATTGGGTTTTGAATGATTGAAGCGATCAAC
JMSF032H16+           CGAGTCATTTAAAGGCAAGAGCGGATTGGAATTGGGTTTTGAATGATTGAAGCGATCAAC
                      ____________________________________________________________
consensus             CGAGTCATTTAAAGGCAAGAGCGGATTGGAATTGGGTTTTGAATGATTGAAGCGATCAAC
 
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JMFS054E08+           AGTAAAGGCTGGTGCCAAAGCCGATAAATCTGTCTGACGATTCAGAAGAAGAAGAGCAAG
JMFS128E08+           AGTAAAGGGTGGTGCCAAAGGCGATAAATTGGTC-GTCGATGAAGAAGAAGAAGAAGAAG
JMSF032H16+           AGTAAAGGGTGGTGCCAAAGGCGATAAATTGGAC-GACGATGAAGAAGAAGAAGAAGAAG
                      ____________________________________________________________
consensus             AGTAAAGGGTGGTGCCAAAGGCGATAAATTGGTC-GACGATGAAGAAGAAGAAGAAGAAG
 
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JMFS054E08+           GAGTAGATGATCTTCCCCTACCCAAGACCCCCAAGCCAAACATCATCTATGACCGATCAA
JMFS128E08+           AAGAAGATGATCCTCCACTACCCAAAACCCCCAAGCCAAACATCATCTCTGACCGAACAA
JMSF032H16+           AAGAAGATGATCCTCCACTACCCAAAACCCCCAAGCCAAACATCATCTCTGACCGAACAA
                      ____________________________________________________________
consensus             AAGAAGATGATCCTCCACTACCCAAAACCCCCAAGCCAAACATCATCTCTGACCGAACAA
 
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JMFS054E08+           ACACCCAATTCCTCGGAATGATCGAACCCCACAATTCACATCGGAATTTCAGC       
JMFS128E08+           ACACCCAATTCCTCCGACTGATCGAACCCCAAAATTCACATCGGAATTTCAGC       
JMSF032H16+           ACACACAATTCCTCCGACTGATCGAACCCCAAAATTCACATCGGAATTTCAGCTAGAAAA
                      ____________________________________________________________
consensus             ACACCCAATTCCTCCGACTGATCGAACCCCAAAATTCACATCGGAATTTCAGCTAGAAAA
 
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JMSF032H16+           AGTTATCAAAAAACTCAAACATTTGTTAACAAAATCATCAAATACTCCGTAATTAACTAA
                      ____________________________________________________________
consensus             AGTTATCAAAAAACTCAAACATTTGTTAACAAAATCATCAAATACTCCGTAATTAACTAA
 
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JMSF032H16+           AATAAAAAATGTTAGATTTCATAGCATTCTATTCTAAAATAATAACCATGCCTGTAATCA
                      ____________________________________________________________
consensus             AATAAAAAATGTTAGATTTCATAGCATTCTATTCTAAAATAATAACCATGCCTGTAATCA
 
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JMSF032H16+           ACAGTGAAAACGAAGATTACGATTGAGATTAAATAGGGATTCAAACGGATTGTATGGATA
                      ____________________________________________________________
consensus             ACAGTGAAAACGAAGATTACGATTGAGATTAAATAGGGATTCAAACGGATTGTATGGATA
 
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JMFS002E09+                                                                 TGACTT
JMSF032H16+           AGGAAGCGTACCAGTGACGAAGAGAGGTAGAGTATGAGTTTTTCTCTGTCTCTCTGACTT
                      ____________________________________________________________
consensus             AGGAAGCGTACCAGTGACGAAGAGAGGTAGAGTATGAGTTTTTCTCTGTCTCTCTGACTT
 
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JMFS002E09+           CCTCTCTCTATCTCCCTCTTCTCTTTCTCTCTCTTTCTTTCCTTCAAACTTGAAGGC   
JMSF032H16+           CCTCTCTCTATCTCCCTCTTCTCTTTCTCTCTCTTTCTTTCCTTCAAACTTGAAGGCGCC
                      ____________________________________________________________
consensus             CCTCTCTCTATCTCCCTCTTCTCTTTCTCTCTCTTTCTTTCCTTCAAACTTGAAGGCGCC