Contig 009423:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001B10Sequence186009423 (2)671001257 (2)ref|XP_009764484.1|72.4PREDICTED: uncharacterized protein LOC104216180 [Nicotiana sylvestris]
JMSF031P01Sequence248009423 (2)732001257 (2)ref|XP_009764484.1|141PREDICTED: uncharacterized protein LOC104216180 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF031P01+                                                               TNTNACCC
                      ____________________________________________________________
consensus                                                                 TNTNACCC
 
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JMSF001B10+                          AAAAAAAAAAAGAAACGTGATATATGGATTTGGGGCTAGTGAAAA
JMSF031P01+           NCCGTTAAACCAAGNAAAAAAAAAAAGAAACGTGATATATGGATTTGGGGCTAGTGAAAA
                      ____________________________________________________________
consensus             NCCGTTAAACCAAGNAAAAAAAAAAAGAAACGTGATATATGGATTTGGGGCTAGTGAAAA
 
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JMSF001B10+           CCGGAGAAAAACGCTCACCCTTTCTCAGTCACGAGTAGGTGAAGAAAAAGAGCGAATGTC
JMSF031P01+           CCGGAGAAAAACGCTCACCCTTTCTCAGTCACGAGTAGGTGAAGAAAAAGAGCGAATGTC
                      ____________________________________________________________
consensus             CCGGAGAAAAACGCTCACCCTTTCTCAGTCACGAGTAGGTGAAGAAAAAGAGCGAATGTC
 
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JMSF001B10+           ATGGTGCCAGTGCGAATTCAAAGGCCCAAAGATTCCATTGTGGTGGAGTTGCAGGTGCAT
JMSF031P01+           ATGGTGCCAGTGCGAATTCAAAGGCCCAAAGATTCCATTGTGGTGGAGTTGCAGGTGCAT
                      ____________________________________________________________
consensus             ATGGTGCCAGTGCGAATTCAAAGGCCCAAAGATTCCATTGTGGTGGAGTTGCAGGTGCAT
 
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JMSF001B10+           CTGTTGAAATTTTGC                                             
JMSF031P01+           CTGTTGAAATTTTGCACCCAGCTTTGGAAGAAAAATAAATAAATAAAAAATCTATCTTTC
                      ____________________________________________________________
consensus             CTGTTGAAATTTTGCACCCAGCTTTGGAAGAAAAATAAATAAATAAAAAATCTATCTTTC