Contig 009418:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS032B05Sequence549009418 (4)emb|CDP15069.1|2e-62unnamed protein product [Coffea canephora]
JMFS034G10Sequence578009418 (4)ref|XP_009791084.1|1e-112PREDICTED: lysine-specific demethylase REF6 isoform X2 [Nicotiana sylvestris]
JMFS150H02Sequence498009418 (4)emb|CDP15069.1|6e-55unnamed protein product [Coffea canephora]
JMSF031I11Sequence632009418 (4)ref|XP_006351452.1|3e-32PREDICTED: lysine-specific demethylase REF6-like [Solanum tuberosum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS034G10+                                                             CAAGGGTAGC
                      ____________________________________________________________
consensus                                                               CAAGGGTAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS034G10+           AAAAGTAACAAGAGGATTGATCTCTCCTCCATAGCCCTGAAGGCGAATGACCTCCTCAAA
                      ____________________________________________________________
consensus             AAAAGTAACAAGAGGATTGATCTCTCCTCCATAGCCCTGAAGGCGAATGACCTCCTCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS034G10+           TGCAACGGCAGCATCTCGGGGAACACCATACCAGGTCTTCCCTGCACCCATATGGAGGTA
                      ____________________________________________________________
consensus             TGCAACGGCAGCATCTCGGGGAACACCATACCAGGTCTTCCCTGCACCCATATGGAGGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS034G10+           ATTCAAGCTATGCAAGTCATGATCCTCAACATGCCAAGCAAACCAACTGAACATCATAGC
                      ____________________________________________________________
consensus             ATTCAAGCTATGCAAGTCATGATCCTCAACATGCCAAGCAAACCAACTGAACATCATAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS034G10+           AATGTAGACCATAGGCGAAGTAACGCCGGGTATCTCTTCCTTCATAAATTTGAGGAGAGA
                      ____________________________________________________________
consensus             AATGTAGACCATAGGCGAAGTAACGCCGGGTATCTCTTCCTTCATAAATTTGAGGAGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS034G10+           GCCTTTGGCCCTGGATACCCCTCTCATATTCCACTCTGTCTCCGCCACAGTGGCCGCCCC
                      ____________________________________________________________
consensus             GCCTTTGGCCCTGGATACCCCTCTCATATTCCACTCTGTCTCCGCCACAGTGGCCGCCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS034G10+           TTCCCCAACAGAATCCGCTTTCTTCGGCGCAAAAGCCGACCCGGGAATATCGTTGGCGTA
                      ____________________________________________________________
consensus             TTCCCCAACAGAATCCGCTTTCTTCGGCGCAAAAGCCGACCCGGGAATATCGTTGGCGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS034G10+           TTCCACGGAGAACGGCTTGTCCACCGTGGCCTTCCAGTAGAGCGACTCGACCTCCAGAGG
JMFS032B05+                                                                     GG
                      ____________________________________________________________
consensus             TTCCACGGAGAACGGCTTGTCCACCGTGGCCTTCCAGTAGAGCGACTCGACCTCCAGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS034G10+           CGACACCCCCTTCTTAAAGCTCTTTTTTAAGTAATTCTTCTCGAACCCTTTGGCTTTGGC
JMFS150H02+                                                        CCCTTTGGCTTTGGC
JMFS032B05+           CGACACCCCCTTCTTGAAGCTCTTTTTTAAGTAATTCTTCTCGAACCCTTTGGCTTTGGC
                      ____________________________________________________________
consensus             CGACACCCCCTTCTTGAAGCTCTTTTTTAAGTAATTCTTCTCGAACCCTTTGGCTTTGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS034G10+           CTCGAATTGCTGGAGCGTATAGTTCTCCCCGCTCTGCCACACCGGTTTCTGCACCGGGCG
JMFS150H02+           CTCGAATTGNTGGAGCGTATAGTTCTCCCCGCTCTGCCACGCCGGTTTCTGCACCGGTCG
JMFS032B05+           CTCGAATTGCTGGAGCGTATAGTTCTCCCCGCTCTGCCACACCGGTTTCTGCACCGGGCG
                      ____________________________________________________________
consensus             CTCGAATTGCTGGAGCGTATAGTTCTCCCCGCTCTGCCACACCGGTTTCTGCACCGGGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS034G10+           GTGGCGCCTGGGGCAGAACCCGATCTGC                                
JMFS150H02+           GTGGCGCCTGGGGCAGAACCCGATCTGCTGCTGCCGGGTAGTGAATGTGGGGCCCGTGGA
JMFS032B05+           GTGGCGCCTGGGGCAGAACCCGATCTGCTGCTGCCGGGTAGTGAATGTGGGGCCCGTGGA
JMSF031I11+                                       TGCTGCCGGGTAGTGAATGTGGGGCCCGTGGA
                      ____________________________________________________________
consensus             GTGGCGCCTGGGGCAGAACCCGATCTGCTGCTGCCGGGTAGTGAATGTGGGGCCCGTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS150H02+           GCGAGGCCGCGCCGCCAGCGACTTGTTGAGGTTAGCAATGGCGGTTTTCTTCGGCGGCAT
JMFS032B05+           GCGAGGCCGCGCCGCCAGCGACTTGTTGAGGTTAGCAATGGCGGTTTTCTTCGGCGGCAT
JMSF031I11+           GCGAGGCCGCGCCGCCAGCGACTTGTTGAGGTTAGCAATGGCGGTTTTCTTCGGCGGCAT
                      ____________________________________________________________
consensus             GCGAGGCCGCGCCGCCAGCGACTTGTTGAGGTTAGCAATGGCGGTTTTCTTCGGCGGCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS150H02+           CCCCACTGGGGGCACGATTTTGCAGATTCCATACTTGGAAGCTTCGCCCTCGATCTTGAA
JMFS032B05+           CCCCACTGGGGGCACGATTTTGCAGATTCCATACTTGGAAGCTTCGCCCTCGATCTTGAA
JMSF031I11+           CCCCACTGGGGGCACGATTTTGCAGATTCCATACTTGGAAGCTTCGCCCTCGATCTTGAA
                      ____________________________________________________________
consensus             CCCCACTGGGGGCACGATTTTGCAGATTCCATACTTGGAAGCTTCGCCCTCGATCTTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS150H02+           AATGTAGGCAATGGGATCTTGGAACTCCTCTAGGGTTGGGTGGTACTCTGGAGCCACTGG
JMFS032B05+           AATGTAGGCAATGGGATCTTGGAACTCCTCTAGGGTTGGGTGGTACTCTGGAGCCACTGG
JMSF031I11+           AATGTAGGCAATGGGATCTTGGAACTCCTCTAGGGTTGGGTGGTACTCTGGAGCCACTGG
                      ____________________________________________________________
consensus             AATGTAGGCAATGGGATCTTGGAACTCCTCTAGGGTTGGGTGGTACTCTGGAGCCACTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS150H02+           TAGGGTTTTCAGCCAAGAGAGAACCTCCACCCCACTGCTACCCTCGCCCATTAGGTCAAA
JMFS032B05+           TAGGGTTTTCAGCCAAGAGAGAACCTCCACCCCACTGCTACCCTCGCCCATTAGGTCAAA
JMSF031I11+           TAGGGTTTTCAGCCAAGAGAGAACCTCCACCCCACTGCTACCCTCGCCCATTAGGTCAAA
                      ____________________________________________________________
consensus             TAGGGTTTTCAGCCAAGAGAGAACCTCCACCCCACTGCTACCCTCGCCCATTAGGTCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS150H02+           CAGCTCACATACGCATACACATATAAATATATGTATATATTCCTGTATGTATTTTCAGAG
JMFS032B05+           CAGCTCACATACGCATACACATATAAATATATGTATATATTCCTGTATGTATTTTCAGAG
JMSF031I11+           CAGCTCACATACGCATACACATATAAATATATGTATATATTCCTGTATGTATTTTCAGAG
                      ____________________________________________________________
consensus             CAGCTCACATACGCATACACATATAAATATATGTATATATTCCTGTATGTATTTTCAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS150H02+           ATCTGAAAAGGGTCACCGTCACTGCTAGATAAGCATAGCTTTAGAGAGAGAGTGAGTTAG
JMFS032B05+           ATCTGAAAAGGGTCACCGTCACTGCTAGATAAGCATAGCTTTAGAGAGAGAGTGAGTTAG
JMSF031I11+           ATCTGAAAAGGGTCACCGTCACTGCTAGATAAGCATAGCTTTAGAGAGAGAGTGAGTTAG
                      ____________________________________________________________
consensus             ATCTGAAAAGGGTCACCGTCACTGCTAGATAAGCATAGCTTTAGAGAGAGAGTGAGTTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS150H02+           AGA                                                         
JMFS032B05+           AGA                                                         
JMSF031I11+           AGAGAGAGATGGGCTATAGAGATTCTTGCTCTACTCTACTCTAATCAATCATTTTCCTTT
                      ____________________________________________________________
consensus             AGAGAGAGATGGGCTATAGAGATTCTTGCTCTACTCTACTCTAATCAATCATTTTCCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF031I11+           CTATAGGAAATTCAAAGCCAAGATGATAAAGTTTATGCGAAATTATATAAATATTTATAT
                      ____________________________________________________________
consensus             CTATAGGAAATTCAAAGCCAAGATGATAAAGTTTATGCGAAATTATATAAATATTTATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF031I11+           ATATTGATAGATAGATAGATACAAAGATACATATATATGTATATTGCTCTGTTTTGTTGT
                      ____________________________________________________________
consensus             ATATTGATAGATAGATAGATACAAAGATACATATATATGTATATTGCTCTGTTTTGTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF031I11+           TTGTGCCCAAAAAAAAACAGAGGAGAGAAAGGGGCAGAGCAGAGGTTGTGAGGTAAGAGC
                      ____________________________________________________________
consensus             TTGTGCCCAAAAAAAAACAGAGGAGAGAAAGGGGCAGAGCAGAGGTTGTGAGGTAAGAGC