Contig 009417:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031G08Sequence440009417 (2)774001410 (2)ref|XP_009759591.1|6e-64PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Nicotiana sylvestris]
JMSF036J06Sequence380009417 (2)698001410 (2)ref|XP_009759591.1|8e-59PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF036J06+                                                                  CCCCC
JMSF031G08+                                                   TNNNCNNNNNCCAACCCCCC
                      ____________________________________________________________
consensus                                                     TNNNCNNNNNCCAACCCCCC
 
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JMSF036J06+           AACCCCCTAAATCAAATCTATCTAAAATCAATTAACCCAAAACCCCTTCAAACTCCAATC
JMSF031G08+           AACCCCCTAAATCAAATCTATCTAAAATCAATTAACCCAAAACCCCTTCAAACTCCAATC
                      ____________________________________________________________
consensus             AACCCCCTAAATCAAATCTATCTAAAATCAATTAACCCAAAACCCCTTCAAACTCCAATC
 
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JMSF036J06+           ACTTCAATGAGCAAAGCGCAAAGCTCAAAACTCAGAGCTCTACGCCCAACACAAACGAGG
JMSF031G08+           ATTTCAATGAGCAAAGCGCAAAGCTCAAAACTCAGAGCTCTACGCCCAACACAAACGAGG
                      ____________________________________________________________
consensus             ATTTCAATGAGCAAAGCGCAAAGCTCAAAACTCAGAGCTCTACGCCCAACACAAACGAGG
 
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JMSF036J06+           CATTCATTCCTTAACAAACCTATACGCTCGCAATCATCGAGAAACATAAATTCATATATT
JMSF031G08+           CATTCATTCCTTAACAAACCTATACGCTCGCAATCATCGAGAAACATAAATTCATATATT
                      ____________________________________________________________
consensus             CATTCATTCCTTAACAAACCTATACGCTCGCAATCATCGAGAAACATAAATTCATATATT
 
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JMSF036J06+           GAAGCAAAAACAAATCAATATGTGTATATACATAGAGAAATAGAACGAGAGGTACATTTA
JMSF031G08+           GAAGCAAAAACAAATCAATATGTGTATATACATAGAGAAATAGAACGAGAGGTACATTTA
                      ____________________________________________________________
consensus             GAAGCAAAAACAAATCAATATGTGTATATACATAGAGAAATAGAACGAGAGGTACATTTA
 
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JMSF036J06+           GCAGAAGAACGCGAAGAACCTTATTGTGTAAGAGAATGGCAGCGGCGGTTGGAATTTGCA
JMSF031G08+           GCAGAAGAACGCGAAGAACCTTATTGTGTAAGAGAATGGCAGCGGCGGTTGGAATTTGCA
                      ____________________________________________________________
consensus             GCAGAAGAACGCGAAGAACCTTATTGTGTAAGAGAATGGCAGCGGCGGTTGGAATTTGCA
 
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JMSF036J06+           TGGATATCAGTGGAGCTCCAGCATTCCCTCAGAACACAACAAAAAGCCCAGAAAGTGAAA
JMSF031G08+           TGGATATCAGTGGAGCTCCAGCATTCCCTCAGAACACAACAAAAAGCCCAGAAAGTGAAA
                      ____________________________________________________________
consensus             TGGATATCAGTGGAGCTCCAGCATTCCCTCAGAACACAACAAAAAGCCCAGAAAGTGAAA
 
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JMSF036J06+           CCATTCTC                                                    
JMSF031G08+           CCATTCTCTGCTCTGTTAAACTGGGGGCGAGCTAATTGAGTGAGTAACTGAGTTAATCCC
                      ____________________________________________________________
consensus             CCATTCTCTGCTCTGTTAAACTGGGGGCGAGCTAATTGAGTGAGTAACTGAGTTAATCCC