Contig 009415:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016O20Sequence242009415 (3)800005656 (3)ref|XP_009603394.1|220PREDICTED: uncharacterized protein LOC104098381 [Nicotiana tomentosiformis]
JMSF028O07Sequence677009415 (3)ref|XP_009772209.1|2e-74PREDICTED: uncharacterized protein LOC104222660 isoform X2 [Nicotiana sylvestri728005656 (3)ref|XP_009603394.1|205PREDICTED: uncharacterized protein LOC104098381 [Nicotiana tomentosiformis]
JMSF031E20Sequence677009415 (3)ref|XP_009772209.1|2e-74PREDICTED: uncharacterized protein LOC104222660 isoform X2 [Nicotiana sylvestri736005656 (3)ref|XP_009603394.1|209PREDICTED: uncharacterized protein LOC104098381 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF028O07+                                                     AAGCTGAAACTGAAGGAC
                      ____________________________________________________________
consensus                                                       AAGCTGAAACTGAAGGAC
 
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JMSF028O07+           TGGGTACTGGATCATGAACGGCTTGACCAGTGTTGATCATTCCTTGCTGATGCCCACCAG
                      ____________________________________________________________
consensus             TGGGTACTGGATCATGAACGGCTTGACCAGTGTTGATCATTCCTTGCTGATGCCCACCAG
 
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JMSF028O07+           ACTGTCTCCACTCCCGTATTCTTCGGATAACATCATCAGAATTGACTCTGCCAAGAAGTT
JMSF031E20+                 TCCACTCCCGTATTCTTCGGATAACATCATCAGAATTGACTCTGCCAAGAAGTT
                      ____________________________________________________________
consensus             ACTGTCTCCACTCCCGTATTCTTCGGATAACATCATCAGAATTGACTCTGCCAAGAAGTT
 
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JMSF028O07+           CCCTGTGCTCTTCATTTGACAATCTCAGTTCTTTCCTAAGCTCAGTTATCAAACTTTCCT
JMSF031E20+           CCCTGTGCTCTTCATTTGACAATCTCAGTTCTTTCCTAAGCTCAGTTATCAAACTTTCCT
                      ____________________________________________________________
consensus             CCCTGTGCTCTTCATTTGACAATCTCAGTTCTTTCCTAAGCTCAGTTATCAAACTTTCCT
 
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JMSF028O07+           TTTCCCAAGTAATGGCATCGGCCTGCGCCTTAAAGGCCCTCAGAACTGAACTGTATGCTT
JMSF031E20+           TTTCCCAAGTAATGGCATCGGCCTGCGCCTTAAAGGCCCTCAGAACTGAACTGTATGCTT
                      ____________________________________________________________
consensus             TTTCCCAAGTAATGGCATCGGCCTGCGCCTTAAAGGCCCTCAGAACTGAACTGTATGCTT
 
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JMSF028O07+           CTTGCTCAAGCTGGTGGATTTGAGCCTCCATATCAGTTTCTCCATACATTTTAGGATAAG
JMSF031E20+           CTTGCTCAAGCTGGTGGATTTGAGCCTCCATATCAGTTTCTCCATACATTTTAGGATAAG
                      ____________________________________________________________
consensus             CTTGCTCAAGCTGGTGGATTTGAGCCTCCATATCAGTTTCTCCATACATTTTAGGATAAG
 
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JMSF028O07+           GGACAGAAGCCATGACAGCAGATNTTCCATTACCAGCAATGCGGCCACCTGGCCCACCTC
JMSF031E20+           GGACAGAAGCCATGACAGCAGATNTTCCATTACCAGCAATGCGGCCACCTGGCCCACCTC
                      ____________________________________________________________
consensus             GGACAGAAGCCATGACAGCAGATNTTCCATTACCAGCAATGCGGCCACCTGGCCCACCTC
 
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JMSF028O07+           CTCTAGGAATTCTATTTTGATGTGAGGGAGGAAGATCATCATCAGTCCCGCTGCTGTCGT
JMSF016O20+                                                                    CGT
JMSF031E20+           CTCTAGGAATTCTATTTTGATGTGAGGGAGGAAGATCATCATCAGTCCCGCTGCTGTCGT
                      ____________________________________________________________
consensus             CTCTAGGAATTCTATTTTGATGTGAGGGAGGAAGATCATCATCAGTCCCGCTGCTGTCGT
 
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JMSF028O07+           ACGCCCCGTAATCCATAGCCAGCTTGCAGCTGAACTTTAACAAAACAGCAAGAACCCTAG
JMSF016O20+           ACGCCCCGTAATCCATAGCCAGCTTGCAGCTGAACTTTAACAAAACAACAAGAACCCTAG
JMSF031E20+           ACGCCCCGTAATCCATAGCCAGCTTGCAGCTGAACTTTAACAAAACAGCAAGAACCCTAG
                      ____________________________________________________________
consensus             ACGCCCCGTAATCCATAGCCAGCTTGCAGCTGAACTTTAACAAAACAGCAAGAACCCTAG
 
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JMSF028O07+           CTGGCTGGCTAGGCTTCGTAAAAAGTTTTCGACAAAAAAAAAGTGCGGAGTAGCGAAAAA
JMSF016O20+           CTGGCTGGCTAGGCTTCGTAAAAAGTTTTCGACAAAAAAAAAGTGCGGAGTAGCGAAAAA
JMSF031E20+           CTGGCTGGCTAGGCTTCGTAAAAAGTTTTCGACAAAAAAAAAGTGCGGAGTAGCGAAAAA
                      ____________________________________________________________
consensus             CTGGCTGGCTAGGCTTCGTAAAAAGTTTTCGACAAAAAAAAAGTGCGGAGTAGCGAAAAA
 
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JMSF028O07+           GCTCAGATACTTGGAATCTCGGAGTTGAAAGAGAGACAGCGTGAGCGCTACGACGGTGCG
JMSF016O20+           GCTCAGATACTTGGAATCTCGGAGTTGAAAGAGAGACAGCGTGAGCGCTACGACGGTGCG
JMSF031E20+           GCTCAGATACTTGGAATCTCGGAGTTGAAAGAGAGACAGCGTGAGCGCTACGACGGTGCG
                      ____________________________________________________________
consensus             GCTCAGATACTTGGAATCTCGGAGTTGAAAGAGAGACAGCGTGAGCGCTACGACGGTGCG
 
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JMSF028O07+           ATTGAGGAGTTAGGGTTTAGAAACAGGCGATTCAACTCTGTGATTCAGCGAGATAG    
JMSF016O20+           ATTGAGGAGTTAGGGTTTAGAAACAGGCGATTCAACTCTGTGATTCAGCGAGATAG    
JMSF031E20+           ATTGAGGAGTTAGGGTTTAGAAACAGGCGATTCAACTCTGTGATTCAGCGAGATAGTCCC
                      ____________________________________________________________
consensus             ATTGAGGAGTTAGGGTTTAGAAACAGGCGATTCAACTCTGTGATTCAGCGAGATAGTCCC