Contig 009412:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026O07Sequence651009412 (2)gb|KDP43717.1|2e-77hypothetical protein JCGZ_22344 [Jatropha curcas]661001384 (2)ref|XP_009337199.1|1e-14PREDICTED: ATP-dependent DNA helicase Q-like 3 [Pyrus x bretschneideri]
JMSF031C03Sequence604009412 (2)ref|XP_009788316.1|3e-59PREDICTED: ATP-dependent DNA helicase Q-like 3 [Nicotiana sylvestris]696001384 (2)ref|XP_006342392.1|5e-40PREDICTED: ATP-dependent DNA helicase Q-like 3-like isoform X2 [Solanum tuberos

Alignment

This contig is upended


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JMSF026O07+                                                      AATCATGGCCCCATGAA
                      ____________________________________________________________
consensus                                                        AATCATGGCCCCATGAA
 
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JMSF026O07+           GAGATGCAATGTGCCTCATCAATAGCAATAAGATTTAACAATCCTCTTGAGTGAATTTTC
                      ____________________________________________________________
consensus             GAGATGCAATGTGCCTCATCAATAGCAATAAGATTTAACAATCCTCTTGAGTGAATTTTC
 
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JMSF026O07+           ACCAGTCTTGACATGAATCCAACCGTATCAATTAGTTCTGGTGTCACATACAATAACCTC
                      ____________________________________________________________
consensus             ACCAGTCTTGACATGAATCCAACCGTATCAATTAGTTCTGGTGTCACATACAATAACCTC
 
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JMSF026O07+           AGTTTCGGCTTCACAGATTCAATGTCCTCGTATATCTTAGTTTTTAACTTGAGAAGTCTG
JMSF031C03+                                                                   TCTG
                      ____________________________________________________________
consensus             AGTTTCGGCTTCACAGATTCAATGTCCTCGTATATCTTAGTTTTTAACTTGAGAAGTCTG
 
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JMSF026O07+           AGTTGATGAGAGAAACTCAGCTGAAATTCCTTTTTCTTTCAATGCCGAAACTTGATTCTC
JMSF031C03+           AGTTGATGAGAGAAACTCAGCTGAAATTCCTTTTTCTTTCAATGCCGAAACTTGATTCTC
                      ____________________________________________________________
consensus             AGTTGATGAGAGAAACTCAGCTGAAATTCCTTTTTCTTTCAATGCCGAAACTTGATTCTC
 
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JMSF026O07+           CATGAGAGCTATTAAAGGGCTAACAACAAGTACAATCCCAGGCTTTGCAAGAGCAGGAAT
JMSF031C03+           CATGAGAGCTATTAAAGGGCTAACAACAAGTACAATCCCAGGCTTTGCAAGAGCAGGAAT
                      ____________________________________________________________
consensus             CATGAGAGCTATTAAAGGGCTAACAACAAGTACAATCCCAGGCTTTGCAAGAGCAGGAAT
 
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JMSF026O07+           CTGGTAGCACATTGATTTTCCCCCACCGGTAGGCATTAAGCAAAAACAATCCCTTCCTGA
JMSF031C03+           CTGGTAGCACATTGATTTTCCCCCACCGGTAGGCATTAAGCAAAAACAATCCCTTCCTGA
                      ____________________________________________________________
consensus             CTGGTAGCACATTGATTTTCCCCCACCGGTAGGCATTAAGCAAAAACAATCCCTTCCTGA
 
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JMSF026O07+           TAAAACAGCTTCAATAGCTTCTAATTGCTTCCCCCGGAAGTTGGCATACCCAAAATGCCA
JMSF031C03+           TAAAACAGCTTCAATAGCTTCTAATTGCTTCCCCCGGAAGTTGGCATACCCAAAATGCCA
                      ____________________________________________________________
consensus             TAAAACAGCTTCAATAGCTTCTAATTGCTTCCCCCGGAAGTTGGCATACCCAAAATGCCA
 
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JMSF026O07+           TCTCAATAGCTTCACCAAAGCTTCCTTCCCAATGGACTTCTTCTCAGGTCCACATATGTT
JMSF031C03+           TCTCAATAGCTTCACCAAAGCTTCCTTCCCAATGGACTTCTTCTCAGGTCCACATATGTT
                      ____________________________________________________________
consensus             TCTCAATAGCTTCACCAAAGCTTCCTTCCCAATGGACTTCTTCTCAGGTCCACATATGTT
 
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JMSF026O07+           TTTCAGTGGCAATGTTGATTTCTTCATTTTACCCACCAA                     
JMSF031C03+           TTTCAGTGGCAATGTTGATTTCTTCATTTTACCCACCAACCAATAACAAGTCAATTTTGT
                      ____________________________________________________________
consensus             TTTCAGTGGCAATGTTGATTTCTTCATTTTACCCACCAACCAATAACAAGTCAATTTTGT
 
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JMSF031C03+           AAAGTAATCAGCCTTTCCCTGCCGTTAAATTGTAACACATTATACATTTATACACGCGTG
                      ____________________________________________________________
consensus             AAAGTAATCAGCCTTTCCCTGCCGTTAAATTGTAACACATTATACATTTATACACGCGTG
 
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JMSF031C03+           CGAATGAAATGGGAGGGGAAAAGGCAGAAATTGGAGAAGCAAATCGAATTAATCATGGAA
                      ____________________________________________________________
consensus             CGAATGAAATGGGAGGGGAAAAGGCAGAAATTGGAGAAGCAAATCGAATTAATCATGGAA
 
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JMSF031C03+           AATAAGACGATAAATTGAATTTAAAATCCGAAAATTAAATTGAAATGATAAACTCTTGGA
                      ____________________________________________________________
consensus             AATAAGACGATAAATTGAATTTAAAATCCGAAAATTAAATTGAAATGATAAACTCTTGGA
 
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JMSF031C03+           GATTACAATCATCAAATGCACGAGGTTAATTATAGCAGCGGAAAGCGATAAAAATTATTC
                      ____________________________________________________________
consensus             GATTACAATCATCAAATGCACGAGGTTAATTATAGCAGCGGAAAGCGATAAAAATTATTC