Contig 009409:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF030O03Sequence654009409 (2)emb|CBI16679.3|2e-35unnamed protein product [Vitis vinifera]679008684 (2)ref|XP_009373205.1|7e-70PREDICTED: ELMO domain-containing protein A isoform X1 [Pyrus x bretschneideri]
JMSF052D04Sequence647009409 (2)922008684 (2)gb|KDP28872.1|1e-126hypothetical protein JCGZ_14643 [Jatropha curcas]

Alignment

This contig is upended


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JMSF052D04+                                                                 CCTGAG
                      ____________________________________________________________
consensus                                                                   CCTGAG
 
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JMSF052D04+           CACATATACATGAAAGCCTTCTGCCAAGCCATGCTGCAGATCCTGCTACAACNTCCGCTG
                      ____________________________________________________________
consensus             CACATATACATGAAAGCCTTCTGCCAAGCCATGCTGCAGATCCTGCTACAACNTCCGCTG
 
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JMSF052D04+           TGGCAAAAGAAAATAATTGGCTGAAGGAAACCACCAAAATTTTAGATACCAACATCAACT
                      ____________________________________________________________
consensus             TGGCAAAAGAAAATAATTGGCTGAAGGAAACCACCAAAATTTTAGATACCAACATCAACT
 
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JMSF052D04+           TGTTCCAATTCATCATACTAGACAGTGATAACTTCATTGTTAGAACTAAAAAGAAAAAAT
                      ____________________________________________________________
consensus             TGTTCCAATTCATCATACTAGACAGTGATAACTTCATTGTTAGAACTAAAAAGAAAAAAT
 
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JMSF052D04+           ATATATAAGGAATTCTATTATAGGTTAATTTAGCAACTAAATAGCATGATCCACCCATCC
                      ____________________________________________________________
consensus             ATATATAAGGAATTCTATTATAGGTTAATTTAGCAACTAAATAGCATGATCCACCCATCC
 
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JMSF052D04+           ACCAAAAGAAAATCCACAGAATTCATAGATTACATGAAGTGCATTGATATAATACTATCT
                      ____________________________________________________________
consensus             ACCAAAAGAAAATCCACAGAATTCATAGATTACATGAAGTGCATTGATATAATACTATCT
 
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JMSF052D04+           AGAAGTGCTCAAAAACTACTTGTGTCATAGAATCTAGCAACTCGAAAACATATCATGAAC
                      ____________________________________________________________
consensus             AGAAGTGCTCAAAAACTACTTGTGTCATAGAATCTAGCAACTCGAAAACATATCATGAAC
 
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JMSF052D04+           CACTTCTAACCAGCTAAACAACGAACATCCTGATGCAAAACTCCTGGTCGACAATCATCA
                      ____________________________________________________________
consensus             CACTTCTAACCAGCTAAACAACGAACATCCTGATGCAAAACTCCTGGTCGACAATCATCA
 
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JMSF052D04+           AAGCAAGTCCGCAAGCAATCTATCTGACCATTCTCGTCAGTAATAAATAAGAACGAACCC
                      ____________________________________________________________
consensus             AAGCAAGTCCGCAAGCAATCTATCTGACCATTCTCGTCAGTAATAAATAAGAACGAACCC
 
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JMSF052D04+           CTCAGGGCAACAACGACAATAAACAACAGAAATTCAAATTCAGAAACCGGGGATAGCAAA
                      ____________________________________________________________
consensus             CTCAGGGCAACAACGACAATAAACAACAGAAATTCAAATTCAGAAACCGGGGATAGCAAA
 
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JMSF052D04+           TAGCAAACTCACCGCAAATGTCAATGCAATTAGGCATGAACCAAGCTAATTTCCAATTCA
JMSF030O03+                       CGCAAATGTCAATGCAATTAGGCATGAACCAAGCTAATTTCCAATTCA
                      ____________________________________________________________
consensus             TAGCAAACTCACCGCAAATGTCAATGCAATTAGGCATGAACCAAGCTAATTTCCAATTCA
 
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JMSF052D04+           CAGATCCAAAGCTCGCATCAATTAGAGACACCACACAAC                     
JMSF030O03+           CAGATCCAAAGCTCGCATCAATTAGAGACACCACACAACTAGTATCTAACATCAGAATCT
                      ____________________________________________________________
consensus             CAGATCCAAAGCTCGCATCAATTAGAGACACCACACAACTAGTATCTAACATCAGAATCT
 
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JMSF030O03+           GAATGGCAAGTGTTGCTCCTATCAAGGCCTTGCGAAATTCTCCTTACCGCCACGAAAGAT
                      ____________________________________________________________
consensus             GAATGGCAAGTGTTGCTCCTATCAAGGCCTTGCGAAATTCTCCTTACCGCCACGAAAGAT
 
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JMSF030O03+           CCTCCTCCTTTCTCGTCCATTCACTCACATAATCTCTCTCTCTCTCTCTCTTTCCACGGA
                      ____________________________________________________________
consensus             CCTCCTCCTTTCTCGTCCATTCACTCACATAATCTCTCTCTCTCTCTCTCTTTCCACGGA
 
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JMSF030O03+           ATCAAAATTCGAGCAATGAGAGGCGATCTACAATGCGGCGAATTCGAATCAGGAACGCGA
                      ____________________________________________________________
consensus             ATCAAAATTCGAGCAATGAGAGGCGATCTACAATGCGGCGAATTCGAATCAGGAACGCGA
 
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JMSF030O03+           ATTACAGACGCGAAATGCGCGATTCCCGCCTTTGTGTTTTTATGTGCTCAAGATCTGGAA
                      ____________________________________________________________
consensus             ATTACAGACGCGAAATGCGCGATTCCCGCCTTTGTGTTTTTATGTGCTCAAGATCTGGAA
 
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JMSF030O03+           TTCGAACAAGAACGCCATATCTGATCCTCTCTCTAACTCCGCGCGCGTCTGCTTATTATG
                      ____________________________________________________________
consensus             TTCGAACAAGAACGCCATATCTGATCCTCTCTCTAACTCCGCGCGCGTCTGCTTATTATG
 
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JMSF030O03+           TAAGCGGTTGATAAGTATCGCTGAGTATATGTAGGAGCTAGGAAGGAGGTATATACTCCA
                      ____________________________________________________________
consensus             TAAGCGGTTGATAAGTATCGCTGAGTATATGTAGGAGCTAGGAAGGAGGTATATACTCCA